RNA–Protein interactions for RNA: ENST00000534555.5

RPS3-220, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 387 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-220ENST00000534555 LRRN4CLQ8ND94 238 aa14.55□□□□□ -0.08
RPS3-220ENST00000534555 NUBPLQ8TB37 319 aa14.55□□□□□ -0.08
RPS3-220ENST00000534555 SLC22A8Q8TCC7 542 aa14.55□□□□□ -0.08
RPS3-220ENST00000534555 FAM45AQ8TCE6 357 aa14.55□□□□□ -0.08
RPS3-220ENST00000534555 ZNF592Q92610 1267 aa14.55□□□□□ -0.08
RPS3-220ENST00000534555 SENP5Q96HI0 755 aaPredicted RBP14.55□□□□□ -0.08
RPS3-220ENST00000534555 TRIB1Q96RU8 372 aa14.55□□□□□ -0.08
RPS3-220ENST00000534555 NT5DC2Q9H857 520 aa14.55□□□□□ -0.08
RPS3-220ENST00000534555 QPCTLQ9NXS2 382 aa14.55□□□□□ -0.08
RPS3-220ENST00000534555 CNOT11Q9UKZ1 510 aaKnown RBP14.55□□□□□ -0.08
RPS3-220ENST00000534555 SLC6A5Q9Y345 797 aa14.55□□□□□ -0.08
RPS3-220ENST00000534555 CHCHD2Q9Y6H1 151 aaPredicted RBP14.55□□□□□ -0.08
RPS3-220ENST00000534555 H7C1Q1 480 aa14.54□□□□□ -0.08
RPS3-220ENST00000534555 RTCAO00442 366 aaKnown RBP14.54□□□□□ -0.08
RPS3-220ENST00000534555 SMAD7O15105 426 aaKnown RBP14.54□□□□□ -0.08
RPS3-220ENST00000534555 TRAPPC6AO75865 159 aa14.54□□□□□ -0.08
RPS3-220ENST00000534555 URI1O94763 535 aaPredicted RBP14.54□□□□□ -0.08
RPS3-220ENST00000534555 ACSL3O95573 720 aa14.54□□□□□ -0.08
RPS3-220ENST00000534555 C1QAP02745 245 aa14.54□□□□□ -0.08
RPS3-220ENST00000534555 IGKV3-11P04433 115 aa14.54□□□□□ -0.08
RPS3-220ENST00000534555 SLC6A12P48065 614 aa14.54□□□□□ -0.08
RPS3-220ENST00000534555 CDKL1Q00532 357 aa14.54□□□□□ -0.08
RPS3-220ENST00000534555 C2orf54Q08AI8 447 aa14.54□□□□□ -0.08
RPS3-220ENST00000534555 RCN2Q14257 317 aa14.54□□□□□ -0.08
RPS3-220ENST00000534555 FBXO48Q5FWF7 155 aa14.54□□□□□ -0.08
RPS3-220ENST00000534555 SPANXN3Q5MJ09 141 aa14.54□□□□□ -0.08
RPS3-220ENST00000534555 Q5PR19 223 aa14.54□□□□□ -0.08
RPS3-220ENST00000534555 ZNF572Q7Z3I7 529 aaPredicted RBP14.54□□□□□ -0.08
RPS3-220ENST00000534555 PDIK1LQ8N165 341 aa14.54□□□□□ -0.08
RPS3-220ENST00000534555 BBOF1Q8ND07 529 aa14.54□□□□□ -0.08
RPS3-220ENST00000534555 GABPB2Q8TAK5 448 aaPredicted RBP14.54□□□□□ -0.08
RPS3-220ENST00000534555 CERS2Q96G23 380 aa14.54□□□□□ -0.08
RPS3-220ENST00000534555 COX4I2Q96KJ9 171 aa14.54□□□□□ -0.08
RPS3-220ENST00000534555 NAT9Q9BTE0 207 aa14.54□□□□□ -0.08
RPS3-220ENST00000534555 DOHHQ9BU89 302 aa14.54□□□□□ -0.08
RPS3-220ENST00000534555 TRIM31Q9BZY9 425 aa14.54□□□□□ -0.08
RPS3-220ENST00000534555 PLAC1Q9HBJ0 212 aa14.54□□□□□ -0.08
RPS3-220ENST00000534555 PPANQ9NQ55 473 aaKnown RBP14.54□□□□□ -0.08
RPS3-220ENST00000534555 CAMK2AQ9UQM7 478 aa14.54□□□□□ -0.08
RPS3-220ENST00000534555 OARD1Q9Y530 152 aa14.54□□□□□ -0.08
RPS3-220ENST00000534555 NCF1BA6NI72 391 aaPredicted RBP14.53□□□□□ -0.08
RPS3-220ENST00000534555 NCF1CA8MVU1 366 aaPredicted RBP14.53□□□□□ -0.08
RPS3-220ENST00000534555 FAM171A2A8MVW0 826 aa14.53□□□□□ -0.08
RPS3-220ENST00000534555 FGF17O60258 216 aa14.53□□□□□ -0.08
RPS3-220ENST00000534555 SH3BGRLO75368 114 aa14.53□□□□□ -0.08
RPS3-220ENST00000534555 SEC31AO94979 1220 aaKnown RBP14.53□□□□□ -0.08
RPS3-220ENST00000534555 TTC4O95801 387 aa14.53□□□□□ -0.08
RPS3-220ENST00000534555 FBXO45P0C2W1 286 aa14.53□□□□□ -0.08
RPS3-220ENST00000534555 NCF1P14598 390 aaPredicted RBP14.53□□□□□ -0.08
RPS3-220ENST00000534555 ZNF37AP17032 561 aaPredicted RBP14.53□□□□□ -0.08
RPS3-220ENST00000534555 CTSSP25774 331 aa14.53□□□□□ -0.08
RPS3-220ENST00000534555 GSTM2P28161 218 aa14.53□□□□□ -0.08
RPS3-220ENST00000534555 STT3AP46977 705 aa14.53□□□□□ -0.08
RPS3-220ENST00000534555 HNMTP50135 292 aa14.53□□□□□ -0.08
RPS3-220ENST00000534555 SORDQ00796 357 aa14.53□□□□□ -0.08
RPS3-220ENST00000534555 TSNQ15631 228 aaKnown RBP14.53□□□□□ -0.08
RPS3-220ENST00000534555 WHAMMP3Q1A5X7 153 aa14.53□□□□□ -0.08
RPS3-220ENST00000534555 NSUN5P2Q63ZY6 315 aa14.53□□□□□ -0.08
RPS3-220ENST00000534555 GALNT7Q86SF2 657 aa14.53□□□□□ -0.08
RPS3-220ENST00000534555 P3H2Q8IVL5 708 aa14.53□□□□□ -0.08
RPS3-220ENST00000534555 SLC15A4Q8N697 577 aa14.53□□□□□ -0.08
RPS3-220ENST00000534555 ESAMQ96AP7 390 aa14.53□□□□□ -0.08
RPS3-220ENST00000534555 RHBDF1Q96CC6 855 aa14.53□□□□□ -0.08
RPS3-220ENST00000534555 HSPBAP1Q96EW2 488 aa14.53□□□□□ -0.08
RPS3-220ENST00000534555 DGAT2Q96PD7 388 aa14.53□□□□□ -0.08
RPS3-220ENST00000534555 GAL3ST4Q96RP7 486 aa14.53□□□□□ -0.08
RPS3-220ENST00000534555 PRDM14Q9GZV8 571 aa14.53□□□□□ -0.08
RPS3-220ENST00000534555 LYRM4Q9HD34 91 aa14.53□□□□□ -0.08
RPS3-220ENST00000534555 CNIH4Q9P003 139 aa14.53□□□□□ -0.08
RPS3-220ENST00000534555 JKAMPQ9P055 326 aa14.53□□□□□ -0.08
RPS3-220ENST00000534555 NSD1Q96L73 2696 aaPredicted RBP14.52□□□□□ -0.08
RPS3-220ENST00000534555 RTTNQ86VV8 2226 aa14.52□□□□□ -0.08
RPS3-220ENST00000534555 TAPBPO15533 448 aa14.52□□□□□ -0.09
RPS3-220ENST00000534555 ARHGEF9O43307 516 aa14.52□□□□□ -0.09
RPS3-220ENST00000534555 TRIM3O75382 744 aaPredicted RBP14.52□□□□□ -0.09
RPS3-220ENST00000534555 CD22P20273 847 aa14.52□□□□□ -0.09
RPS3-220ENST00000534555 CPN2P22792 545 aa14.52□□□□□ -0.09
RPS3-220ENST00000534555 ATP5A1P25705 553 aaKnown RBP14.52□□□□□ -0.09
RPS3-220ENST00000534555 MSH2P43246 934 aa14.52□□□□□ -0.09
RPS3-220ENST00000534555 ARL4CP56559 192 aa14.52□□□□□ -0.09
RPS3-220ENST00000534555 CALCOCO2Q13137 446 aa14.52□□□□□ -0.09
RPS3-220ENST00000534555 HP1BP3Q5SSJ5 553 aaPredicted RBP14.52□□□□□ -0.09
RPS3-220ENST00000534555 DCST1Q5T197 706 aa14.52□□□□□ -0.09
RPS3-220ENST00000534555 BICRALQ6AI39 1079 aa14.52□□□□□ -0.09
RPS3-220ENST00000534555 TRMT10BQ6PF06 316 aaKnown RBP14.52□□□□□ -0.09
RPS3-220ENST00000534555 TMEM64Q6YI46 380 aa14.52□□□□□ -0.09
RPS3-220ENST00000534555 CXXC5Q7LFL8 322 aaKnown RBP14.52□□□□□ -0.09
RPS3-220ENST00000534555 ACOT4Q8N9L9 421 aa14.52□□□□□ -0.09
RPS3-220ENST00000534555 C9orf106Q8NAJ2 232 aa14.52□□□□□ -0.09
RPS3-220ENST00000534555 ANKRD49Q8WVL7 239 aa14.52□□□□□ -0.09
RPS3-220ENST00000534555 Q96MF0 132 aa14.52□□□□□ -0.09
RPS3-220ENST00000534555 ERP44Q9BS26 406 aa14.52□□□□□ -0.09
RPS3-220ENST00000534555 TMEM79Q9BSE2 394 aa14.52□□□□□ -0.09
RPS3-220ENST00000534555 SNX24Q9Y343 169 aa14.52□□□□□ -0.09
RPS3-220ENST00000534555 UTP11Q9Y3A2 253 aaKnown RBP14.52□□□□□ -0.09
RPS3-220ENST00000534555 MBD3L4A6NDZ8 208 aaPredicted RBP14.51□□□□□ -0.09
RPS3-220ENST00000534555 MBD3L3A6NE82 208 aaPredicted RBP14.51□□□□□ -0.09
RPS3-220ENST00000534555 MBD3L5A6NJ08 208 aaPredicted RBP14.51□□□□□ -0.09
RPS3-220ENST00000534555 CD8B2A6NJW9 211 aa14.51□□□□□ -0.09
RPS3-220ENST00000534555 INAFM1C9JVW0 142 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms