RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 WDR20Q8TBZ3 569 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 ZNF721Q8TF20 911 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 ITLN2Q8WWU7 325 aaPredicted RBP9.68□□□□□ -0.86
CAPN1-225ENST00000533704 UCN3Q969E3 161 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 SENP5Q96HI0 755 aaPredicted RBP9.68□□□□□ -0.86
CAPN1-225ENST00000533704 ART5Q96L15 291 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 FRG2BQ96QU4 278 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 GAL3ST4Q96RP7 486 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 NTMT1Q9BV86 223 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 ERVK-6Q9BXR3 956 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 ZNF717Q9BY31 904 aaPredicted RBP9.68□□□□□ -0.86
CAPN1-225ENST00000533704 MRPL1Q9BYD6 325 aaKnown RBP9.68□□□□□ -0.86
CAPN1-225ENST00000533704 DEFB127Q9H1M4 99 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 ZBTB26Q9HCK0 441 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 SLC12A4Q9UP95 1085 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 ERVK-19Q9WJR5 959 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 TSC22D4Q9Y3Q8 395 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 ASB4Q9Y574 426 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 CRYBG3Q68DQ2 2970 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 PHF3Q92576 2039 aaKnown RBP9.67□□□□□ -0.86
CAPN1-225ENST00000533704 NBPF19A0A087WUL8 3843 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 IQANK1A0A1B0GTG1 560 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 A0A1B0GTH9 108 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 PINLYPA6NC86 204 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 FOXE1O00358 373 aaPredicted RBP9.67□□□□□ -0.86
CAPN1-225ENST00000533704 PPP6CO00743 305 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 PRRG2O14669 202 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 RIPK2O43353 540 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 PROM1O43490 865 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 GPR75O95800 540 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 OTCP00480 354 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 KLK1P06870 262 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 TPOP07202 933 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 SNRPB2P08579 225 aaKnown RBP9.67□□□□□ -0.86
CAPN1-225ENST00000533704 RPS17P08708 135 aaKnown RBP9.67□□□□□ -0.86
CAPN1-225ENST00000533704 ABHD2P08910 425 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 TAC1P20366 129 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 PIK3R1P27986 724 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 GCAP28676 217 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 PTGS2P35354 604 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 SMSP52788 366 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 ARFIP1P53367 373 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 CCNYL2Q5T2Q4 361 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 SP5Q6BEB4 398 aaPredicted RBP9.67□□□□□ -0.86
CAPN1-225ENST00000533704 OR52E8Q6IFG1 317 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 MRM1Q6IN84 353 aaKnown RBP9.67□□□□□ -0.86
CAPN1-225ENST00000533704 OPN5Q6U736 354 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 RPTNQ6XPR3 784 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 RNF111Q6ZNA4 994 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 RTL4Q6ZR62 310 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 FAM47EQ6ZV65 393 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 GPALPP1Q8IXQ4 340 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 ST13P4Q8IZP2 240 aaPredicted RBP9.67□□□□□ -0.86
CAPN1-225ENST00000533704 ZNF808Q8N4W9 903 aaPredicted RBP9.67□□□□□ -0.86
CAPN1-225ENST00000533704 C7orf57Q8NEG2 295 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 OR2M7Q8NG81 312 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 OR52N2Q8NGI0 321 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 OR8K3Q8NH51 312 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 TRPC4APQ8TEL6 797 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 AGAP11Q8TF27 550 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 SELENOMQ8WWX9 145 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 RIT1Q92963 219 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 MTBPQ96DY7 904 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 HBEGFQ99075 208 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 PELOQ9BRX2 385 aaKnown RBP9.67□□□□□ -0.86
CAPN1-225ENST00000533704 DDX31Q9H8H2 851 aaKnown RBP9.67□□□□□ -0.86
CAPN1-225ENST00000533704 FARSBQ9NSD9 589 aaKnown RBP9.67□□□□□ -0.86
CAPN1-225ENST00000533704 DEPPQ9NTK1 212 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 TEX10Q9NXF1 929 aaPredicted RBP9.67□□□□□ -0.86
CAPN1-225ENST00000533704 AHSPQ9NZD4 102 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 TMEM216Q9P0N5 145 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 TBK1Q9UHD2 729 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 ZNF835Q9Y2P0 537 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 ABCA12Q86UK0 2595 aa9.67□□□□□ -0.86
CAPN1-225ENST00000533704 INTS1Q8N201 2190 aaKnown RBP9.66□□□□□ -0.86
CAPN1-225ENST00000533704 A0A1B0GTL3 188 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 A0A1W2PS29 197 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 ACOT7O00154 380 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 PGRMC2O15173 223 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 ZNF354AO60765 605 aaPredicted RBP9.66□□□□□ -0.86
CAPN1-225ENST00000533704 SUPT7LO94864 414 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 OR4F21O95013 312 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 SEMA3DO95025 777 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 PDYNP01213 254 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 P04436 131 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 SBK3P0C264 359 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 CCL3P10147 92 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 GRNP28799 593 aaKnown RBP9.66□□□□□ -0.86
CAPN1-225ENST00000533704 DNASE1L1P49184 302 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 MAPK12P53778 367 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 PPIAP62937 165 aaKnown RBP9.66□□□□□ -0.86
CAPN1-225ENST00000533704 ADORA2A-AS1P86434 159 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 CLCQ05315 142 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 BIKQ13323 160 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 ART3Q13508 389 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 SLC29A2Q14542 456 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 CMPK2Q5EBM0 449 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 C6orf163Q5TEZ5 329 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 LETMD1Q6P1Q0 360 aa9.66□□□□□ -0.86
CAPN1-225ENST00000533704 ADGRD1Q6QNK2 874 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms