RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 LCP2Q13094 533 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 SLC13A2Q13183 592 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 RUNX2Q13950 521 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 RCN2Q14257 317 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 ABRAXAS2Q15018 415 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 TMEM35AQ53FP2 167 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 DEPDC1Q5TB30 811 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 DMRTA1Q5VZB9 504 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 FAM219BQ5XKK7 198 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 FRG2Q64ET8 278 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 LETMD1Q6P1Q0 360 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 CYP20A1Q6UW02 462 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 NCCRP1Q6ZVX7 275 aaPredicted RBP8.13□□□□□ -1.11
COPB1-210ENST00000533533 GALNTL5Q7Z4T8 443 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 ANKRD37Q7Z713 158 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 CROCCP2Q86T23 111 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 CDH24Q86UP0 819 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 C10orf107Q8IVU9 208 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 GHDCQ8N2G8 530 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 HORMAD2Q8N7B1 307 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 BANPQ8N9N5 519 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 METTL6Q8TCB7 284 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 TCP10LQ8TDR4 215 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 AGAP11Q8TF27 550 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 PHF10Q8WUB8 498 aaKnown RBP8.13□□□□□ -1.11
COPB1-210ENST00000533533 SREK1Q8WXA9 508 aaKnown RBP8.13□□□□□ -1.11
COPB1-210ENST00000533533 TSLPQ969D9 159 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 L3HYPDHQ96EM0 354 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 SMIM10Q96HG1 83 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 FRG2BQ96QU4 278 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 OR1F2PQ96R84 312 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 HBEGFQ99075 208 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 NPAS2Q99743 824 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 TBCDQ9BTW9 1192 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 TMEM109Q9BVC6 243 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 ENKD1Q9H0I2 346 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 MCCC2Q9HCC0 563 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 MMP25Q9NPA2 562 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 MID1IP1Q9NPA3 183 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 KCNK9Q9NPC2 374 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 SENP1Q9P0U3 644 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 SLC17A7Q9P2U7 560 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 TRPS1Q9UHF7 1281 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 SLC12A4Q9UP95 1085 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 MRPS33Q9Y291 106 aaKnown RBP8.13□□□□□ -1.11
COPB1-210ENST00000533533 STK38LQ9Y2H1 464 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 FIS1Q9Y3D6 152 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 EML6Q6ZMW3 1958 aa8.13□□□□□ -1.11
COPB1-210ENST00000533533 A0A1B0GTL3 188 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 MYOCOSA0A1B0GUC4 107 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 WDR91A4D1P6 747 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 GABRR3A8MPY1 467 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 E9PLN8 166 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 CLDN4O14493 209 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 ADAM10O14672 748 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 ZNHIT1O43257 154 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 CTIFO43310 598 aaKnown RBP8.12□□□□□ -1.11
COPB1-210ENST00000533533 NEURL1O76050 574 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 PDYNP01213 254 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 KRT6AP02538 564 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 GBAP04062 536 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 KRT6BP04259 564 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 SP1P08047 785 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 NEFHP12036 1026 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 MAOAP21397 527 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 HIST1H1TP22492 207 aaPredicted RBP8.12□□□□□ -1.11
COPB1-210ENST00000533533 CPN2P22792 545 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 ATP5A1P25705 553 aaKnown RBP8.12□□□□□ -1.11
COPB1-210ENST00000533533 KRT6CP48668 564 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 LIM2P55344 173 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 RAB38P57729 211 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 OR4D2P58180 307 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 BTG2P78543 158 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 OC90Q02509 493 aaPredicted RBP8.12□□□□□ -1.11
COPB1-210ENST00000533533 ASPHQ12797 758 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 SLAMF1Q13291 335 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 E2F2Q14209 437 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 KRTAP21-3Q3LHN1 58 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 ADPRMQ3LIE5 342 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 SFT2D3Q587I9 215 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 TCHHL1Q5QJ38 904 aaPredicted RBP8.12□□□□□ -1.11
COPB1-210ENST00000533533 BEND6Q5SZJ8 279 aaPredicted RBP8.12□□□□□ -1.11
COPB1-210ENST00000533533 LIPMQ5VYY2 423 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 OR4C11Q6IEV9 310 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 SLC25A25Q6KCM7 469 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 PAPD4Q6PIY7 484 aaKnown RBP8.12□□□□□ -1.11
COPB1-210ENST00000533533 SCIMPQ6UWF3 145 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 LRIG3Q6UXM1 1119 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 MEX3BQ6ZN04 569 aaKnown RBP8.12□□□□□ -1.11
COPB1-210ENST00000533533 ZNF793Q6ZN11 406 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 UBE3DQ7Z6J8 389 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.12□□□□□ -1.11
COPB1-210ENST00000533533 CLNKQ7Z7G1 428 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 DOLPP1Q86YN1 238 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 CHERPQ8IWX8 916 aaKnown RBP8.12□□□□□ -1.11
COPB1-210ENST00000533533 LGI4Q8N135 537 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 EID3Q8N140 333 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 SLC5A8Q8N695 610 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 ACOT4Q8N9L9 421 aa8.12□□□□□ -1.11
COPB1-210ENST00000533533 FAM98AQ8NCA5 519 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms