RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 OR14A16Q8NHC5 309 aa11.19□□□□□ -0.62
SSBP3-214ENST00000533209 ZNF75CPQ92670 426 aaPredicted RBP11.19□□□□□ -0.62
SSBP3-214ENST00000533209 PPWD1Q96BP3 646 aaKnown RBP11.19□□□□□ -0.62
SSBP3-214ENST00000533209 AGAP4Q96P64 663 aa11.19□□□□□ -0.62
SSBP3-214ENST00000533209 CCT7Q99832 543 aa11.19□□□□□ -0.62
SSBP3-214ENST00000533209 FAIM2Q9BWQ8 316 aa11.19□□□□□ -0.62
SSBP3-214ENST00000533209 ZBTB20Q9HC78 741 aaPredicted RBP11.19□□□□□ -0.62
SSBP3-214ENST00000533209 MYNNQ9NPC7 610 aa11.19□□□□□ -0.62
SSBP3-214ENST00000533209 PNPOQ9NVS9 261 aa11.19□□□□□ -0.62
SSBP3-214ENST00000533209 THAP1Q9NVV9 213 aa11.19□□□□□ -0.62
SSBP3-214ENST00000533209 C5AR2Q9P296 337 aa11.19□□□□□ -0.62
SSBP3-214ENST00000533209 PTGFRNQ9P2B2 879 aa11.19□□□□□ -0.62
SSBP3-214ENST00000533209 GIMAP2Q9UG22 337 aa11.19□□□□□ -0.62
SSBP3-214ENST00000533209 ZNF223Q9UK11 482 aaPredicted RBP11.19□□□□□ -0.62
SSBP3-214ENST00000533209 CLCA3PQ9Y6N3 262 aa11.19□□□□□ -0.62
SSBP3-214ENST00000533209 ATP6AP2A0A1C7CYW4 349 aa11.18□□□□□ -0.62
SSBP3-214ENST00000533209 C17orf105B2RV13 164 aa11.18□□□□□ -0.62
SSBP3-214ENST00000533209 PEX11AO75192 247 aa11.18□□□□□ -0.62
SSBP3-214ENST00000533209 ATP6AP2O75787 350 aa11.18□□□□□ -0.62
SSBP3-214ENST00000533209 C1QL1O75973 258 aa11.18□□□□□ -0.62
SSBP3-214ENST00000533209 DDAH2O95865 285 aa11.18□□□□□ -0.62
SSBP3-214ENST00000533209 ALPPP05187 535 aa11.18□□□□□ -0.62
SSBP3-214ENST00000533209 SLC35E2P0CK97 266 aa11.18□□□□□ -0.62
SSBP3-214ENST00000533209 TNNI3P19429 210 aa11.18□□□□□ -0.62
SSBP3-214ENST00000533209 TACR1P25103 407 aa11.18□□□□□ -0.62
SSBP3-214ENST00000533209 PIK3R1P27986 724 aa11.18□□□□□ -0.62
SSBP3-214ENST00000533209 GSTM5P46439 218 aa11.18□□□□□ -0.62
SSBP3-214ENST00000533209 ALDH9A1P49189 494 aa11.18□□□□□ -0.62
SSBP3-214ENST00000533209 XKP51811 444 aa11.18□□□□□ -0.62
SSBP3-214ENST00000533209 HK2P52789 917 aa11.18□□□□□ -0.62
SSBP3-214ENST00000533209 RPL38P63173 70 aaKnown RBP11.18□□□□□ -0.62
SSBP3-214ENST00000533209 PLIN5Q00G26 463 aa11.18□□□□□ -0.62
SSBP3-214ENST00000533209 PDCD2Q16342 344 aaPredicted RBP11.18□□□□□ -0.62
SSBP3-214ENST00000533209 ZNF750Q32MQ0 723 aa11.18□□□□□ -0.62
SSBP3-214ENST00000533209 GALNTL6Q49A17 601 aa11.18□□□□□ -0.62
SSBP3-214ENST00000533209 CRB2Q5IJ48 1285 aa11.18□□□□□ -0.62
SSBP3-214ENST00000533209 C6orf136Q5SQH8 315 aa11.18□□□□□ -0.62
SSBP3-214ENST00000533209 IGFL3Q6UXB1 125 aa11.18□□□□□ -0.62
SSBP3-214ENST00000533209 ISLR2Q6UXK2 745 aa11.18□□□□□ -0.62
SSBP3-214ENST00000533209 KIRREL3Q8IZU9 778 aa11.18□□□□□ -0.62
SSBP3-214ENST00000533209 ZNF321PQ8N8H1 164 aa11.18□□□□□ -0.62
SSBP3-214ENST00000533209 MORN4Q8NDC4 146 aa11.18□□□□□ -0.62
SSBP3-214ENST00000533209 DAZLQ92904 295 aaKnown RBP11.18□□□□□ -0.62
SSBP3-214ENST00000533209 NCLNQ969V3 563 aa11.18□□□□□ -0.62
SSBP3-214ENST00000533209 C19orf60Q96EN9 201 aa11.18□□□□□ -0.62
SSBP3-214ENST00000533209 RBM18Q96H35 190 aaKnown RBP11.18□□□□□ -0.62
SSBP3-214ENST00000533209 EGLN2Q96KS0 407 aa11.18□□□□□ -0.62
SSBP3-214ENST00000533209 PPP3R2Q96LZ3 170 aa11.18□□□□□ -0.62
SSBP3-214ENST00000533209 DGAT2Q96PD7 388 aa11.18□□□□□ -0.62
SSBP3-214ENST00000533209 NPAS2Q99743 824 aa11.18□□□□□ -0.62
SSBP3-214ENST00000533209 PELOQ9BRX2 385 aaKnown RBP11.18□□□□□ -0.62
SSBP3-214ENST00000533209 KCNK13Q9HB14 408 aa11.18□□□□□ -0.62
SSBP3-214ENST00000533209 PFDN4Q9NQP4 134 aa11.18□□□□□ -0.62
SSBP3-214ENST00000533209 EXO1Q9UQ84 846 aaKnown RBP11.18□□□□□ -0.62
SSBP3-214ENST00000533209 WBP11Q9Y2W2 641 aaKnown RBP11.18□□□□□ -0.62
SSBP3-214ENST00000533209 TMED5Q9Y3A6 229 aa11.18□□□□□ -0.62
SSBP3-214ENST00000533209 OR10H2O60403 315 aa11.17□□□□□ -0.62
SSBP3-214ENST00000533209 ERAL1O75616 437 aaKnown RBP11.17□□□□□ -0.62
SSBP3-214ENST00000533209 CPMP14384 443 aa11.17□□□□□ -0.62
SSBP3-214ENST00000533209 COX7A2P14406 83 aa11.17□□□□□ -0.62
SSBP3-214ENST00000533209 SDC1P18827 310 aa11.17□□□□□ -0.62
SSBP3-214ENST00000533209 GALNSP34059 522 aa11.17□□□□□ -0.62
SSBP3-214ENST00000533209 CD97P48960 835 aa11.17□□□□□ -0.62
SSBP3-214ENST00000533209 DUSP2Q05923 314 aa11.17□□□□□ -0.62
SSBP3-214ENST00000533209 C2orf80Q0P641 193 aa11.17□□□□□ -0.62
SSBP3-214ENST00000533209 NFATC3Q12968 1075 aa11.17□□□□□ -0.62
SSBP3-214ENST00000533209 MFAP5Q13361 173 aa11.17□□□□□ -0.62
SSBP3-214ENST00000533209 HEPACAMQ14CZ8 416 aa11.17□□□□□ -0.62
SSBP3-214ENST00000533209 PRSS53Q2L4Q9 553 aa11.17□□□□□ -0.62
SSBP3-214ENST00000533209 ATP6AP1LQ52LC2 224 aa11.17□□□□□ -0.62
SSBP3-214ENST00000533209 FCRLBQ6BAA4 426 aa11.17□□□□□ -0.62
SSBP3-214ENST00000533209 LINC00696Q6ZRV3 163 aa11.17□□□□□ -0.62
SSBP3-214ENST00000533209 PTRH1Q86Y79 214 aaKnown RBP11.17□□□□□ -0.62
SSBP3-214ENST00000533209 HPS6Q86YV9 775 aa11.17□□□□□ -0.62
SSBP3-214ENST00000533209 CDC26Q8NHZ8 85 aa11.17□□□□□ -0.62
SSBP3-214ENST00000533209 SLC2A12Q8TD20 617 aa11.17□□□□□ -0.62
SSBP3-214ENST00000533209 DOK4Q8TEW6 326 aa11.17□□□□□ -0.62
SSBP3-214ENST00000533209 ZNF721Q8TF20 911 aa11.17□□□□□ -0.62
SSBP3-214ENST00000533209 KLHL29Q96CT2 875 aa11.17□□□□□ -0.62
SSBP3-214ENST00000533209 TUBGCP3Q96CW5 907 aa11.17□□□□□ -0.62
SSBP3-214ENST00000533209 CNRIP1Q96F85 164 aaPredicted RBP11.17□□□□□ -0.62
SSBP3-214ENST00000533209 VMP1Q96GC9 406 aa11.17□□□□□ -0.62
SSBP3-214ENST00000533209 SENP5Q96HI0 755 aaPredicted RBP11.17□□□□□ -0.62
SSBP3-214ENST00000533209 ZNF681Q96N22 645 aa11.17□□□□□ -0.62
SSBP3-214ENST00000533209 LMF1Q96S06 567 aa11.17□□□□□ -0.62
SSBP3-214ENST00000533209 OR8D2Q9GZM6 311 aa11.17□□□□□ -0.62
SSBP3-214ENST00000533209 EHD3Q9NZN3 535 aa11.17□□□□□ -0.62
SSBP3-214ENST00000533209 PSME2Q9UL46 239 aa11.17□□□□□ -0.62
SSBP3-214ENST00000533209 DOCK10Q96BY6 2186 aa11.17□□□□□ -0.62
SSBP3-214ENST00000533209 SMG1Q96Q15 3661 aaKnown RBP11.16□□□□□ -0.62
SSBP3-214ENST00000533209 TRBV11-1A0A0K0K1C0 115 aa11.16□□□□□ -0.62
SSBP3-214ENST00000533209 A8MUI8 341 aa11.16□□□□□ -0.62
SSBP3-214ENST00000533209 HRKO00198 91 aa11.16□□□□□ -0.62
SSBP3-214ENST00000533209 PRKNO60260 465 aaPredicted RBP11.16□□□□□ -0.62
SSBP3-214ENST00000533209 MAN1A2O60476 641 aa11.16□□□□□ -0.62
SSBP3-214ENST00000533209 DPM1O60762 260 aa11.16□□□□□ -0.62
SSBP3-214ENST00000533209 IGKV3-11P04433 115 aa11.16□□□□□ -0.62
SSBP3-214ENST00000533209 BCKDHAP12694 445 aa11.16□□□□□ -0.62
SSBP3-214ENST00000533209 PORP16435 677 aaPredicted RBP11.16□□□□□ -0.62
SSBP3-214ENST00000533209 DDCP20711 480 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms