RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 IFIT3O14879 490 aaKnown RBP3.08□□□□□ -1.92
PTPRK-220ENST00000531466 ZW10O43264 779 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 NUDT21O43809 227 aaKnown RBP3.08□□□□□ -1.92
PTPRK-220ENST00000531466 GMFGO60234 142 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 CACNG3O60359 315 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 CYTIPO60759 359 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 SH3BGRLO75368 114 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 NXPH4O95158 308 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 OPN1LWP04000 364 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 TPBGLP0DKB5 382 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 MYBL1P10243 752 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 CLUP10909 449 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 ANXA8P13928 327 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 POLR2EP19388 210 aaKnown RBP3.08□□□□□ -1.92
PTPRK-220ENST00000531466 AOC1P19801 751 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 ANXA13P27216 316 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 RFC2P35250 354 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 LIG4P49917 911 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 ARHGDIBP52566 201 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 CARD18P57730 90 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 YBEYP58557 167 aaPredicted RBP3.08□□□□□ -1.92
PTPRK-220ENST00000531466 GSTO1P78417 241 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 ASPHQ12797 758 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 PLD1Q13393 1074 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 CA9Q16790 459 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 KCTD21Q4G0X4 260 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 SMUG1Q53HV7 270 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 C9orf152Q5JTZ5 239 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 GLRA4Q5JXX5 417 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 ERMARDQ5T6L9 678 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 ANXA8L1Q5VT79 327 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 TWF2Q6IBS0 349 aaKnown RBP3.08□□□□□ -1.92
PTPRK-220ENST00000531466 KRT80Q6KB66 452 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 METAP1DQ6UB28 335 aaPredicted RBP3.08□□□□□ -1.92
PTPRK-220ENST00000531466 NCCRP1Q6ZVX7 275 aaPredicted RBP3.08□□□□□ -1.92
PTPRK-220ENST00000531466 NANOGNBQ7Z5D8 188 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 PSTKQ8IV42 348 aaKnown RBP3.08□□□□□ -1.92
PTPRK-220ENST00000531466 LINC00346Q8IVM7 164 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 TTC5Q8N0Z6 440 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 FBXW8Q8N3Y1 598 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 MCUQ8NE86 351 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 TRPV1Q8NER1 839 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 LPCAT1Q8NF37 534 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 CLHC1Q8NHS4 586 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 FAM81AQ8TBF8 368 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 SETD6Q8TBK2 473 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 SLC22A8Q8TCC7 542 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 THRSPQ92748 146 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 TMCO6Q96DC7 493 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 SPACA9Q96E40 222 aaPredicted RBP3.08□□□□□ -1.92
PTPRK-220ENST00000531466 SIPA1Q96FS4 1042 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 MMP27Q9H306 513 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 KCNK15Q9H427 330 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 LRRC40Q9H9A6 602 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.08□□□□□ -1.92
PTPRK-220ENST00000531466 RAB20Q9NX57 234 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 NINJ2Q9NZG7 142 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 TMOD2Q9NZR1 351 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 MAD2L2Q9UI95 211 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 ANAPC2Q9UJX6 822 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 ANGPTL2Q9UKU9 493 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 PAIP2BQ9ULR5 123 aaKnown RBP3.08□□□□□ -1.92
PTPRK-220ENST00000531466 DDX19BQ9UMR2 479 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 PPIEQ9UNP9 301 aaKnown RBP3.08□□□□□ -1.92
PTPRK-220ENST00000531466 LIPT1Q9Y234 373 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 WBP11Q9Y2W2 641 aaKnown RBP3.08□□□□□ -1.92
PTPRK-220ENST00000531466 PTRH2Q9Y3E5 179 aaKnown RBP3.08□□□□□ -1.92
PTPRK-220ENST00000531466 R4GN57 208 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 ZNF541Q9H0D2 1346 aa3.08□□□□□ -1.92
PTPRK-220ENST00000531466 C15orf38-AP3S2A0A0A6YYH1 394 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 hCG_1809904A0A1W2PP81 198 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 A0A1W2PPE2 198 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 A0A1W2PR64 198 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 FAM168BA1KXE4 195 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 ANKUB1A6NFN9 424 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 K7ERQ8 282 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 ADAMDEC1O15204 470 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 ATP6V1G1O75348 118 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 BCAS2O75934 225 aaPredicted RBP3.07□□□□□ -1.92
PTPRK-220ENST00000531466 ZWINTO95229 277 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 FAM86B2P0C5J1 330 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 SMIM18P0DKX4 95 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 GHRP10912 638 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 VPREB1P12018 145 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 POU2F1P14859 743 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 GCFC2P16383 781 aaKnown RBP3.07□□□□□ -1.92
PTPRK-220ENST00000531466 CASP3P42574 277 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 STARP49675 285 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 ARSEP51690 589 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 ATXN3P54252 364 aaPredicted RBP3.07□□□□□ -1.92
PTPRK-220ENST00000531466 PRRX1P54821 245 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 FKBP3Q00688 224 aaKnown RBP3.07□□□□□ -1.92
PTPRK-220ENST00000531466 GFPT1Q06210 699 aaPredicted RBP3.07□□□□□ -1.92
PTPRK-220ENST00000531466 SCN1BQ07699 218 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 C17orf67Q0P5P2 114 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 TEFQ10587 303 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 CHIT1Q13231 466 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 BTG3Q14201 252 aaPredicted RBP3.07□□□□□ -1.92
PTPRK-220ENST00000531466 ARHGAP19Q14CB8 494 aa3.07□□□□□ -1.92
PTPRK-220ENST00000531466 ZMYND11Q15326 602 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms