RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 ABATP80404 500 aa16.31■□□□□ 0.2
BRCA2-204ENST00000530893 ILKQ13418 452 aa16.31■□□□□ 0.2
BRCA2-204ENST00000530893 OXA1LQ15070 435 aa16.31■□□□□ 0.2
BRCA2-204ENST00000530893 MAPK11Q15759 364 aa16.31■□□□□ 0.2
BRCA2-204ENST00000530893 MLF2Q15773 248 aaPredicted RBP16.31■□□□□ 0.2
BRCA2-204ENST00000530893 INAQ16352 499 aa16.31■□□□□ 0.2
BRCA2-204ENST00000530893 TRIM16LQ309B1 348 aa16.31■□□□□ 0.2
BRCA2-204ENST00000530893 DCST1Q5T197 706 aa16.31■□□□□ 0.2
BRCA2-204ENST00000530893 KRT73Q86Y46 540 aa16.31■□□□□ 0.2
BRCA2-204ENST00000530893 YAF2Q8IY57 180 aa16.31■□□□□ 0.2
BRCA2-204ENST00000530893 HDDC3Q8N4P3 179 aa16.31■□□□□ 0.2
BRCA2-204ENST00000530893 TP53I13Q8NBR0 393 aaPredicted RBP16.31■□□□□ 0.2
BRCA2-204ENST00000530893 B3GNT7Q8NFL0 401 aa16.31■□□□□ 0.2
BRCA2-204ENST00000530893 UCK2Q9BZX2 261 aa16.31■□□□□ 0.2
BRCA2-204ENST00000530893 DZANK1Q9NVP4 752 aa16.31■□□□□ 0.2
BRCA2-204ENST00000530893 SELENONQ9NZV5 590 aa16.31■□□□□ 0.2
BRCA2-204ENST00000530893 SEC14L3Q9UDX4 400 aa16.31■□□□□ 0.2
BRCA2-204ENST00000530893 KLK4Q9Y5K2 254 aa16.31■□□□□ 0.2
BRCA2-204ENST00000530893 GPC6Q9Y625 555 aaPredicted RBP16.31■□□□□ 0.2
BRCA2-204ENST00000530893 HEATR5BQ9P2D3 2071 aa16.31■□□□□ 0.2
BRCA2-204ENST00000530893 CKAP5Q14008 2032 aa16.31■□□□□ 0.2
BRCA2-204ENST00000530893 LAMA3Q16787 3333 aa16.31■□□□□ 0.2
BRCA2-204ENST00000530893 H1F0P07305 194 aaKnown RBP16.31■□□□□ 0.2
BRCA2-204ENST00000530893 ELAVL4P26378 380 aaKnown RBP16.31■□□□□ 0.2
BRCA2-204ENST00000530893 NUDT6P53370 316 aa16.31■□□□□ 0.2
BRCA2-204ENST00000530893 SNRPGP62308 76 aaKnown RBP16.31■□□□□ 0.2
BRCA2-204ENST00000530893 RPS21P63220 83 aaKnown RBP16.31■□□□□ 0.2
BRCA2-204ENST00000530893 TP53BP2Q13625 1128 aa16.31■□□□□ 0.2
BRCA2-204ENST00000530893 NDUFAF5Q5TEU4 345 aa16.31■□□□□ 0.2
BRCA2-204ENST00000530893 BHLHB9Q6PI77 547 aa16.31■□□□□ 0.2
BRCA2-204ENST00000530893 TMEM64Q6YI46 380 aa16.31■□□□□ 0.2
BRCA2-204ENST00000530893 PTCHD4Q6ZW05 846 aa16.31■□□□□ 0.2
BRCA2-204ENST00000530893 ADCK2Q7Z695 626 aa16.31■□□□□ 0.2
BRCA2-204ENST00000530893 RAB8BQ92930 207 aa16.31■□□□□ 0.2
BRCA2-204ENST00000530893 SLC35G5Q96KT7 338 aa16.31■□□□□ 0.2
BRCA2-204ENST00000530893 Q96MT0 163 aa16.31■□□□□ 0.2
BRCA2-204ENST00000530893 NRTNQ99748 197 aa16.31■□□□□ 0.2
BRCA2-204ENST00000530893 TREX2Q9BQ50 279 aaPredicted RBP16.31■□□□□ 0.2
BRCA2-204ENST00000530893 DPH7Q9BTV6 452 aa16.31■□□□□ 0.2
BRCA2-204ENST00000530893 SPATA5L1Q9BVQ7 753 aa16.31■□□□□ 0.2
BRCA2-204ENST00000530893 OSGEPL1Q9H4B0 414 aa16.31■□□□□ 0.2
BRCA2-204ENST00000530893 MVB12BQ9H7P6 319 aa16.31■□□□□ 0.2
BRCA2-204ENST00000530893 SLC35C2Q9NQQ7 365 aa16.31■□□□□ 0.2
BRCA2-204ENST00000530893 RHCGQ9UBD6 479 aa16.31■□□□□ 0.2
BRCA2-204ENST00000530893 IGKV1-8A0A0C4DH67 115 aa16.3■□□□□ 0.2
BRCA2-204ENST00000530893 TRBV4-1A0A0J9YWV2 114 aa16.3■□□□□ 0.2
BRCA2-204ENST00000530893 ANHXE9PGG2 379 aa16.3■□□□□ 0.2
BRCA2-204ENST00000530893 CA3P07451 260 aa16.3■□□□□ 0.2
BRCA2-204ENST00000530893 CD40LGP29965 261 aa16.3■□□□□ 0.2
BRCA2-204ENST00000530893 NTSP30990 170 aa16.3■□□□□ 0.2
BRCA2-204ENST00000530893 BCAP31P51572 246 aa16.3■□□□□ 0.2
BRCA2-204ENST00000530893 ERVK-21P61565 698 aa16.3■□□□□ 0.2
BRCA2-204ENST00000530893 GNA13Q14344 377 aa16.3■□□□□ 0.2
BRCA2-204ENST00000530893 SLC9A5Q14940 896 aa16.3■□□□□ 0.2
BRCA2-204ENST00000530893 ZIC1Q15915 447 aa16.3■□□□□ 0.2
BRCA2-204ENST00000530893 ZNF404Q494X3 552 aa16.3■□□□□ 0.2
BRCA2-204ENST00000530893 TMEM236Q5W0B7 351 aa16.3■□□□□ 0.2
BRCA2-204ENST00000530893 TUBA3EQ6PEY2 450 aa16.3■□□□□ 0.2
BRCA2-204ENST00000530893 LINC00471Q8N535 108 aa16.3■□□□□ 0.2
BRCA2-204ENST00000530893 TBC1D19Q8N5T2 526 aa16.3■□□□□ 0.2
BRCA2-204ENST00000530893 AMER2Q8N7J2 671 aa16.3■□□□□ 0.2
BRCA2-204ENST00000530893 KBTBD8Q8NFY9 601 aa16.3■□□□□ 0.2
BRCA2-204ENST00000530893 MCFD2Q8NI22 146 aa16.3■□□□□ 0.2
BRCA2-204ENST00000530893 SNRNP27Q8WVK2 155 aaKnown RBP16.3■□□□□ 0.2
BRCA2-204ENST00000530893 AMDHD1Q96NU7 426 aa16.3■□□□□ 0.2
BRCA2-204ENST00000530893 SARGQ9BW04 601 aa16.3■□□□□ 0.2
BRCA2-204ENST00000530893 C1QTNF2Q9BXJ5 285 aa16.3■□□□□ 0.2
BRCA2-204ENST00000530893 ALOXE3Q9BYJ1 711 aa16.3■□□□□ 0.2
BRCA2-204ENST00000530893 C5AR2Q9P296 337 aa16.3■□□□□ 0.2
BRCA2-204ENST00000530893 PNMA8BQ9ULN7 279 aaPredicted RBP16.3■□□□□ 0.2
BRCA2-204ENST00000530893 SLC17A4Q9Y2C5 497 aa16.3■□□□□ 0.2
BRCA2-204ENST00000530893 PRR19A6NJB7 356 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 SLC28A2O43868 658 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 KDM1AO60341 852 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 SLITRK5O94991 958 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 PAK4O96013 591 aaPredicted RBP16.29■□□□□ 0.2
BRCA2-204ENST00000530893 BMP4P12644 408 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 CNR2P34972 360 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 GPC1P35052 558 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 AHRP35869 848 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 TSFMP43897 325 aaKnown RBP16.29■□□□□ 0.2
BRCA2-204ENST00000530893 SLC15A1P46059 708 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 RGS6P49758 472 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 UGT2B15P54855 530 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 SGCGQ13326 291 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 TIMM50Q3ZCQ8 353 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 BTLAQ7Z6A9 289 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 DNAJC5GQ8N7S2 189 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 SFXN5Q8TD22 340 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 MOAP1Q96BY2 351 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 ERLEC1Q96DZ1 483 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 C17orf62Q9BQA9 187 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 BTBD1Q9H0C5 482 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 DSN1Q9H410 356 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 GLIPR2Q9H4G4 154 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 ZBTB20Q9HC78 741 aaPredicted RBP16.29■□□□□ 0.2
BRCA2-204ENST00000530893 BCL2L10Q9HD36 194 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 SEMA3GQ9NS98 782 aa16.29■□□□□ 0.2
BRCA2-204ENST00000530893 IMP3Q9NV31 184 aaKnown RBP16.29■□□□□ 0.2
BRCA2-204ENST00000530893 REV1Q9UBZ9 1251 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms