RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 ZNF597Q96LX8 424 aa4.85□□□□□ -1.63
CASP4-208ENST00000530309 RUNDC3BQ96NL0 473 aa4.85□□□□□ -1.63
CASP4-208ENST00000530309 OCR1Q9BZK8 76 aa4.85□□□□□ -1.63
CASP4-208ENST00000530309 GTSE1Q9NYZ3 720 aa4.85□□□□□ -1.63
CASP4-208ENST00000530309 VPS54Q9P1Q0 977 aa4.85□□□□□ -1.63
CASP4-208ENST00000530309 PAK5Q9P286 719 aa4.85□□□□□ -1.63
CASP4-208ENST00000530309 NARFQ9UHQ1 456 aa4.85□□□□□ -1.63
CASP4-208ENST00000530309 DIMT1Q9UNQ2 313 aaKnown RBP4.85□□□□□ -1.63
CASP4-208ENST00000530309 AUP1Q9Y679 476 aa4.85□□□□□ -1.63
CASP4-208ENST00000530309 ABCC9O60706 1549 aa4.85□□□□□ -1.63
CASP4-208ENST00000530309 MYH15Q9Y2K3 1946 aa4.85□□□□□ -1.63
CASP4-208ENST00000530309 BCLAF3A2AJT9 711 aaKnown RBP4.84□□□□□ -1.63
CASP4-208ENST00000530309 CCDC69A6NI79 296 aa4.84□□□□□ -1.63
CASP4-208ENST00000530309 OR6B1O95007 311 aa4.84□□□□□ -1.63
CASP4-208ENST00000530309 TNFRSF4P43489 277 aa4.84□□□□□ -1.63
CASP4-208ENST00000530309 MTIF2P46199 727 aaKnown RBP4.84□□□□□ -1.63
CASP4-208ENST00000530309 ATP4BP51164 291 aa4.84□□□□□ -1.63
CASP4-208ENST00000530309 CASP9P55211 416 aa4.84□□□□□ -1.63
CASP4-208ENST00000530309 CDC37Q16543 378 aaPredicted RBP4.84□□□□□ -1.63
CASP4-208ENST00000530309 POM121L1PQ3SYA9 428 aa4.84□□□□□ -1.63
CASP4-208ENST00000530309 GPRIN3Q6ZVF9 776 aa4.84□□□□□ -1.63
CASP4-208ENST00000530309 CATSPER3Q86XQ3 398 aa4.84□□□□□ -1.63
CASP4-208ENST00000530309 Q8N377 158 aa4.84□□□□□ -1.63
CASP4-208ENST00000530309 ICA1LQ8NDH6 482 aa4.84□□□□□ -1.63
CASP4-208ENST00000530309 CDHR1Q96JP9 859 aa4.84□□□□□ -1.63
CASP4-208ENST00000530309 RUFY1Q96T51 708 aa4.84□□□□□ -1.63
CASP4-208ENST00000530309 EGLN1Q9GZT9 426 aa4.84□□□□□ -1.63
CASP4-208ENST00000530309 DDX47Q9H0S4 455 aaKnown RBP4.84□□□□□ -1.63
CASP4-208ENST00000530309 JPT2Q9H910 190 aa4.84□□□□□ -1.63
CASP4-208ENST00000530309 SP140LQ9H930 580 aa4.84□□□□□ -1.63
CASP4-208ENST00000530309 ANO10Q9NW15 660 aa4.84□□□□□ -1.63
CASP4-208ENST00000530309 KLK13Q9UKR3 277 aa4.84□□□□□ -1.63
CASP4-208ENST00000530309 A0A1W2PPR1 153 aa4.83□□□□□ -1.64
CASP4-208ENST00000530309 MEI4A8MW99 385 aa4.83□□□□□ -1.64
CASP4-208ENST00000530309 NME2P1O60361 137 aa4.83□□□□□ -1.64
CASP4-208ENST00000530309 FRAT2O75474 233 aaPredicted RBP4.83□□□□□ -1.64
CASP4-208ENST00000530309 HPRP00739 348 aa4.83□□□□□ -1.64
CASP4-208ENST00000530309 IGHG1P01857 330 aa4.83□□□□□ -1.64
CASP4-208ENST00000530309 MBL2P11226 248 aaPredicted RBP4.83□□□□□ -1.64
CASP4-208ENST00000530309 AHCYP23526 432 aa4.83□□□□□ -1.64
CASP4-208ENST00000530309 ETV5P41161 510 aa4.83□□□□□ -1.64
CASP4-208ENST00000530309 SLC12A3P55017 1021 aa4.83□□□□□ -1.64
CASP4-208ENST00000530309 SRP54P61011 504 aaKnown RBP4.83□□□□□ -1.64
CASP4-208ENST00000530309 CDKL1Q00532 357 aa4.83□□□□□ -1.64
CASP4-208ENST00000530309 FCHO2Q0JRZ9 810 aa4.83□□□□□ -1.64
CASP4-208ENST00000530309 ENPP2Q13822 863 aa4.83□□□□□ -1.64
CASP4-208ENST00000530309 EXOSC7Q15024 291 aaKnown RBP4.83□□□□□ -1.64
CASP4-208ENST00000530309 SIX1Q15475 284 aaPredicted RBP4.83□□□□□ -1.64
CASP4-208ENST00000530309 GPAT3Q53EU6 434 aa4.83□□□□□ -1.64
CASP4-208ENST00000530309 DDI2Q5TDH0 399 aa4.83□□□□□ -1.64
CASP4-208ENST00000530309 HIST2H2AA3Q6FI13 130 aa4.83□□□□□ -1.64
CASP4-208ENST00000530309 CDC42EP5Q6NZY7 148 aa4.83□□□□□ -1.64
CASP4-208ENST00000530309 RPAINQ86UA6 219 aa4.83□□□□□ -1.64
CASP4-208ENST00000530309 LMNTD2Q8IXW0 634 aa4.83□□□□□ -1.64
CASP4-208ENST00000530309 BATF2Q8N1L9 274 aa4.83□□□□□ -1.64
CASP4-208ENST00000530309 ZNF781Q8N8C0 355 aa4.83□□□□□ -1.64
CASP4-208ENST00000530309 CCNYQ8ND76 341 aa4.83□□□□□ -1.64
CASP4-208ENST00000530309 TMEM185AQ8NFB2 350 aa4.83□□□□□ -1.64
CASP4-208ENST00000530309 PNPLA2Q96AD5 504 aa4.83□□□□□ -1.64
CASP4-208ENST00000530309 ATOH8Q96SQ7 321 aa4.83□□□□□ -1.64
CASP4-208ENST00000530309 JPH2Q9BR39 696 aaPredicted RBP4.83□□□□□ -1.64
CASP4-208ENST00000530309 DCTN5Q9BTE1 182 aa4.83□□□□□ -1.64
CASP4-208ENST00000530309 HEXA-AS1Q9H8Q6 139 aa4.83□□□□□ -1.64
CASP4-208ENST00000530309 NDUFA13Q9P0J0 144 aa4.83□□□□□ -1.64
CASP4-208ENST00000530309 FAM153AQ9UHL3 310 aa4.83□□□□□ -1.64
CASP4-208ENST00000530309 RARRES3Q9UL19 164 aa4.83□□□□□ -1.64
CASP4-208ENST00000530309 KIF7Q2M1P5 1343 aa4.82□□□□□ -1.64
CASP4-208ENST00000530309 SALL1Q9NSC2 1324 aa4.82□□□□□ -1.64
CASP4-208ENST00000530309 PI15O43692 258 aa4.82□□□□□ -1.64
CASP4-208ENST00000530309 MARCKSP29966 332 aaPredicted RBP4.82□□□□□ -1.64
CASP4-208ENST00000530309 ACADSBP45954 432 aa4.82□□□□□ -1.64
CASP4-208ENST00000530309 PRELPP51888 382 aa4.82□□□□□ -1.64
CASP4-208ENST00000530309 TATDN1Q6P1N9 297 aa4.82□□□□□ -1.64
CASP4-208ENST00000530309 NUFIP2Q7Z417 695 aaKnown RBP4.82□□□□□ -1.64
CASP4-208ENST00000530309 ADAMTSL2Q86TH1 951 aa4.82□□□□□ -1.64
CASP4-208ENST00000530309 ZNRF1Q8ND25 227 aa4.82□□□□□ -1.64
CASP4-208ENST00000530309 OR1K1Q8NGR3 316 aa4.82□□□□□ -1.64
CASP4-208ENST00000530309 KIAA1524Q8TCG1 905 aa4.82□□□□□ -1.64
CASP4-208ENST00000530309 ZNF577Q9BSK1 485 aa4.82□□□□□ -1.64
CASP4-208ENST00000530309 CCDC28BQ9BUN5 200 aa4.82□□□□□ -1.64
CASP4-208ENST00000530309 ABCG8Q9H221 673 aa4.82□□□□□ -1.64
CASP4-208ENST00000530309 NT5DC2Q9H857 520 aa4.82□□□□□ -1.64
CASP4-208ENST00000530309 SLC25A19Q9HC21 320 aa4.82□□□□□ -1.64
CASP4-208ENST00000530309 SYTL2Q9HCH5 934 aa4.82□□□□□ -1.64
CASP4-208ENST00000530309 ERVK-18Q9QC07 812 aa4.82□□□□□ -1.64
CASP4-208ENST00000530309 COPS7AQ9UBW8 275 aa4.82□□□□□ -1.64
CASP4-208ENST00000530309 HTATSF1O43719 755 aaKnown RBP4.81□□□□□ -1.64
CASP4-208ENST00000530309 TSPAN2O60636 221 aa4.81□□□□□ -1.64
CASP4-208ENST00000530309 DUSP11O75319 330 aaKnown RBP4.81□□□□□ -1.64
CASP4-208ENST00000530309 REC8O95072 547 aa4.81□□□□□ -1.64
CASP4-208ENST00000530309 FCER2P06734 321 aa4.81□□□□□ -1.64
CASP4-208ENST00000530309 APRTP07741 180 aa4.81□□□□□ -1.64
CASP4-208ENST00000530309 HIST1H2AGP0C0S8 130 aaPredicted RBP4.81□□□□□ -1.64
CASP4-208ENST00000530309 LMO2P25791 158 aa4.81□□□□□ -1.64
CASP4-208ENST00000530309 SLC1A4P43007 532 aa4.81□□□□□ -1.64
CASP4-208ENST00000530309 TKTL1P51854 596 aa4.81□□□□□ -1.64
CASP4-208ENST00000530309 SSTP61278 116 aa4.81□□□□□ -1.64
CASP4-208ENST00000530309 HERC4Q5GLZ8 1057 aaPredicted RBP4.81□□□□□ -1.64
CASP4-208ENST00000530309 RAB12Q6IQ22 244 aa4.81□□□□□ -1.64
CASP4-208ENST00000530309 MIER3Q7Z3K6 550 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms