RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 CHIT1Q13231 466 aa8.29□□□□□ -1.08
CCDC90B-217ENST00000530253 GGTA1PQ4G0N0 100 aa8.29□□□□□ -1.08
CCDC90B-217ENST00000530253 XKR6Q5GH73 641 aa8.29□□□□□ -1.08
CCDC90B-217ENST00000530253 LIPMQ5VYY2 423 aa8.29□□□□□ -1.08
CCDC90B-217ENST00000530253 GRHL2Q6ISB3 625 aa8.29□□□□□ -1.08
CCDC90B-217ENST00000530253 PWWP2BQ6NUJ5 590 aa8.29□□□□□ -1.08
CCDC90B-217ENST00000530253 FRMD7Q6ZUT3 714 aa8.29□□□□□ -1.08
CCDC90B-217ENST00000530253 PPP1R3BQ86XI6 285 aa8.29□□□□□ -1.08
CCDC90B-217ENST00000530253 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.29□□□□□ -1.08
CCDC90B-217ENST00000530253 LAS2Q8IYD9 372 aa8.29□□□□□ -1.08
CCDC90B-217ENST00000530253 LSMEM2Q8N112 164 aa8.29□□□□□ -1.08
CCDC90B-217ENST00000530253 CCDC63Q8NA47 563 aa8.29□□□□□ -1.08
CCDC90B-217ENST00000530253 SLC38A9Q8NBW4 561 aa8.29□□□□□ -1.08
CCDC90B-217ENST00000530253 CREB3L4Q8TEY5 395 aa8.29□□□□□ -1.08
CCDC90B-217ENST00000530253 RNF31Q96EP0 1072 aa8.29□□□□□ -1.08
CCDC90B-217ENST00000530253 PTCD3Q96EY7 689 aaKnown RBP8.29□□□□□ -1.08
CCDC90B-217ENST00000530253 C10orf90Q96M02 699 aa8.29□□□□□ -1.08
CCDC90B-217ENST00000530253 TEFMQ96QE5 360 aaKnown RBP8.29□□□□□ -1.08
CCDC90B-217ENST00000530253 SELENOSQ9BQE4 189 aa8.29□□□□□ -1.08
CCDC90B-217ENST00000530253 AIF1LQ9BQI0 150 aa8.29□□□□□ -1.08
CCDC90B-217ENST00000530253 NTMT1Q9BV86 223 aa8.29□□□□□ -1.08
CCDC90B-217ENST00000530253 NOL11Q9H8H0 719 aaKnown RBP8.29□□□□□ -1.08
CCDC90B-217ENST00000530253 SEMA4BQ9NPR2 832 aaPredicted RBP8.29□□□□□ -1.08
CCDC90B-217ENST00000530253 DKK4Q9UBT3 224 aa8.29□□□□□ -1.08
CCDC90B-217ENST00000530253 ZNF490Q9ULM2 529 aaPredicted RBP8.29□□□□□ -1.08
CCDC90B-217ENST00000530253 MRPS2Q9Y399 296 aaKnown RBP8.29□□□□□ -1.08
CCDC90B-217ENST00000530253 TMEM184BQ9Y519 407 aaPredicted RBP8.29□□□□□ -1.08
CCDC90B-217ENST00000530253 AP1M2Q9Y6Q5 423 aa8.29□□□□□ -1.08
CCDC90B-217ENST00000530253 TMEM8BA6NDV4 472 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 HMGB1P1B2RPK0 211 aaPredicted RBP8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 C4orf51C9J302 202 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 H0YIV9 168 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 ZSCAN9O15535 394 aaPredicted RBP8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 UGDHO60701 494 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 SCRG1O75711 98 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 OR2B3O76000 313 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 SUPT7LO94864 414 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 STATHP02808 62 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 SLC5A2P31639 672 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 AHRP35869 848 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 HNF4AP41235 474 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 VSX2P58304 361 aaPredicted RBP8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 LCP2Q13094 533 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 HKDC1Q2TB90 917 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 TBC1D25Q3MII6 688 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 TCTE1Q5JU00 501 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 WASHC2DQ5SRD0 308 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 DCAF12Q5T6F0 453 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 LIPJQ5W064 366 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 CYB5D1Q6P9G0 228 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 TMIGD1Q6UXZ0 262 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 CEACAM20Q6UY09 585 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 TIPARPQ7Z3E1 657 aaKnown RBP8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 SYVN1Q86TM6 617 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 ASPGQ86U10 573 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 CSNK1A1LQ8N752 337 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 OR4F6Q8NGB9 312 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 WDR20Q8TBZ3 569 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 NT5CQ8TCD5 201 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 TRPC4APQ8TEL6 797 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 AGAP11Q8TF27 550 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 ST8SIA2Q92186 375 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 ZNF382Q96SR6 550 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 ZPBPQ9BS86 351 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 ASPSCR1Q9BZE9 553 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 PITHD1Q9GZP4 211 aaPredicted RBP8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 RHBGQ9H310 441 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 ACTR8Q9H981 624 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 FANCEQ9HB96 536 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 MLXIPLQ9NP71 852 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 STARD5Q9NSY2 213 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 RUVBL1Q9Y265 456 aaKnown RBP8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 RNF11Q9Y3C5 154 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 ANGPTL3Q9Y5C1 460 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 SMG1Q96Q15 3661 aaKnown RBP8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 HEATR5BQ9P2D3 2071 aa8.28□□□□□ -1.08
CCDC90B-217ENST00000530253 H3BQF6 201 aa8.27□□□□□ -1.09
CCDC90B-217ENST00000530253 DYNC1I1O14576 645 aa8.27□□□□□ -1.09
CCDC90B-217ENST00000530253 BIRC5O15392 142 aa8.27□□□□□ -1.09
CCDC90B-217ENST00000530253 ZNF749O43361 778 aa8.27□□□□□ -1.09
CCDC90B-217ENST00000530253 ATP8B1O43520 1251 aa8.27□□□□□ -1.09
CCDC90B-217ENST00000530253 TLX3O43711 291 aaPredicted RBP8.27□□□□□ -1.09
CCDC90B-217ENST00000530253 OR1F1O43749 312 aa8.27□□□□□ -1.09
CCDC90B-217ENST00000530253 STK17BO94768 372 aa8.27□□□□□ -1.09
CCDC90B-217ENST00000530253 KIAA0754O94854 1291 aa8.27□□□□□ -1.09
CCDC90B-217ENST00000530253 OR4F21O95013 312 aa8.27□□□□□ -1.09
CCDC90B-217ENST00000530253 CLDN9O95484 217 aa8.27□□□□□ -1.09
CCDC90B-217ENST00000530253 OTCP00480 354 aa8.27□□□□□ -1.09
CCDC90B-217ENST00000530253 CXCR2P25025 360 aa8.27□□□□□ -1.09
CCDC90B-217ENST00000530253 GSTM2P28161 218 aa8.27□□□□□ -1.09
CCDC90B-217ENST00000530253 RBMS1P29558 406 aaKnown RBP8.27□□□□□ -1.09
CCDC90B-217ENST00000530253 CCNG1P51959 295 aa8.27□□□□□ -1.09
CCDC90B-217ENST00000530253 PKNOX1P55347 436 aa8.27□□□□□ -1.09
CCDC90B-217ENST00000530253 NAA20P61599 178 aa8.27□□□□□ -1.09
CCDC90B-217ENST00000530253 CYP4F2P78329 520 aa8.27□□□□□ -1.09
CCDC90B-217ENST00000530253 GPS2Q13227 327 aa8.27□□□□□ -1.09
CCDC90B-217ENST00000530253 ADPRMQ3LIE5 342 aa8.27□□□□□ -1.09
CCDC90B-217ENST00000530253 PAGE2BQ5JRK9 111 aa8.27□□□□□ -1.09
CCDC90B-217ENST00000530253 RHBDD2Q6NTF9 364 aa8.27□□□□□ -1.09
CCDC90B-217ENST00000530253 MED27Q6P2C8 311 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms