RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 HYAL3O43820 417 aaPredicted RBP13.58□□□□□ -0.23
TTC39A-216ENST00000530004 B3GALT2O43825 422 aa13.58□□□□□ -0.23
TTC39A-216ENST00000530004 CCL4P13236 92 aa13.58□□□□□ -0.23
TTC39A-216ENST00000530004 GGT1P19440 569 aa13.58□□□□□ -0.23
TTC39A-216ENST00000530004 PPIBP23284 216 aaKnown RBP13.58□□□□□ -0.23
TTC39A-216ENST00000530004 SOAT1P35610 550 aa13.58□□□□□ -0.23
TTC39A-216ENST00000530004 PTDSS1P48651 473 aaKnown RBP13.58□□□□□ -0.23
TTC39A-216ENST00000530004 MANFP55145 182 aaKnown RBP13.58□□□□□ -0.23
TTC39A-216ENST00000530004 PCBP4P57723 403 aaKnown RBP13.58□□□□□ -0.23
TTC39A-216ENST00000530004 RAB11FIP2Q7L804 512 aa13.58□□□□□ -0.23
TTC39A-216ENST00000530004 TMPRSS7Q7RTY8 843 aa13.58□□□□□ -0.23
TTC39A-216ENST00000530004 GPR155Q7Z3F1 870 aa13.58□□□□□ -0.23
TTC39A-216ENST00000530004 SERPINA11Q86U17 422 aa13.58□□□□□ -0.23
TTC39A-216ENST00000530004 MICU2Q8IYU8 434 aa13.58□□□□□ -0.23
TTC39A-216ENST00000530004 OR5P2Q8WZ92 322 aa13.58□□□□□ -0.23
TTC39A-216ENST00000530004 REXO5Q96IC2 774 aaKnown RBP13.58□□□□□ -0.23
TTC39A-216ENST00000530004 SLC35A5Q9BS91 424 aa13.58□□□□□ -0.23
TTC39A-216ENST00000530004 FANCEQ9HB96 536 aa13.58□□□□□ -0.23
TTC39A-216ENST00000530004 SLC35C2Q9NQQ7 365 aa13.58□□□□□ -0.23
TTC39A-216ENST00000530004 A0A1W2PNU3 283 aaPredicted RBP13.58□□□□□ -0.24
TTC39A-216ENST00000530004 ZNF860A6NHJ4 632 aa13.58□□□□□ -0.24
TTC39A-216ENST00000530004 H3BMH7 237 aa13.58□□□□□ -0.24
TTC39A-216ENST00000530004 PGRMC2O15173 223 aa13.58□□□□□ -0.24
TTC39A-216ENST00000530004 GMNNO75496 209 aa13.58□□□□□ -0.24
TTC39A-216ENST00000530004 NTRK1P04629 796 aa13.58□□□□□ -0.24
TTC39A-216ENST00000530004 GPX2P18283 190 aa13.58□□□□□ -0.24
TTC39A-216ENST00000530004 FRKP42685 505 aaPredicted RBP13.58□□□□□ -0.24
TTC39A-216ENST00000530004 MC2RQ01718 297 aa13.58□□□□□ -0.24
TTC39A-216ENST00000530004 CYP51A1Q16850 503 aa13.58□□□□□ -0.24
TTC39A-216ENST00000530004 TCTE1Q5JU00 501 aa13.58□□□□□ -0.24
TTC39A-216ENST00000530004 PRSS41Q7RTY9 318 aa13.58□□□□□ -0.24
TTC39A-216ENST00000530004 OR1L3Q8NH93 324 aa13.58□□□□□ -0.24
TTC39A-216ENST00000530004 FIG4Q92562 907 aa13.58□□□□□ -0.24
TTC39A-216ENST00000530004 ZBED6CLQ96FA7 236 aaPredicted RBP13.58□□□□□ -0.24
TTC39A-216ENST00000530004 NSMCE2Q96MF7 247 aa13.58□□□□□ -0.24
TTC39A-216ENST00000530004 TRIM4Q9C037 500 aa13.58□□□□□ -0.24
TTC39A-216ENST00000530004 RPF2Q9H7B2 306 aaKnown RBP13.58□□□□□ -0.24
TTC39A-216ENST00000530004 ENAMQ9NRM1 1142 aa13.58□□□□□ -0.24
TTC39A-216ENST00000530004 PHF11Q9UIL8 331 aa13.58□□□□□ -0.24
TTC39A-216ENST00000530004 SERTAD3Q9UJW9 196 aa13.58□□□□□ -0.24
TTC39A-216ENST00000530004 ACSL6Q9UKU0 697 aa13.58□□□□□ -0.24
TTC39A-216ENST00000530004 CORO2BQ9UQ03 480 aa13.58□□□□□ -0.24
TTC39A-216ENST00000530004 GMEB1Q9Y692 573 aa13.58□□□□□ -0.24
TTC39A-216ENST00000530004 B4E171 279 aa13.57□□□□□ -0.24
TTC39A-216ENST00000530004 TXNDC9O14530 226 aa13.57□□□□□ -0.24
TTC39A-216ENST00000530004 PLD2O14939 933 aa13.57□□□□□ -0.24
TTC39A-216ENST00000530004 ERAL1O75616 437 aaKnown RBP13.57□□□□□ -0.24
TTC39A-216ENST00000530004 NR2F6P10588 404 aa13.57□□□□□ -0.24
TTC39A-216ENST00000530004 ITIH1P19827 911 aa13.57□□□□□ -0.24
TTC39A-216ENST00000530004 SLC7A1P30825 629 aa13.57□□□□□ -0.24
TTC39A-216ENST00000530004 BUD31P41223 144 aaPredicted RBP13.57□□□□□ -0.24
TTC39A-216ENST00000530004 TSPAN7P41732 249 aa13.57□□□□□ -0.24
TTC39A-216ENST00000530004 LIM2P55344 173 aa13.57□□□□□ -0.24
TTC39A-216ENST00000530004 POLE2P56282 527 aa13.57□□□□□ -0.24
TTC39A-216ENST00000530004 OLR1P78380 273 aa13.57□□□□□ -0.24
TTC39A-216ENST00000530004 TNFRSF17Q02223 184 aa13.57□□□□□ -0.24
TTC39A-216ENST00000530004 HSPB3Q12988 150 aa13.57□□□□□ -0.24
TTC39A-216ENST00000530004 RUNX2Q13950 521 aa13.57□□□□□ -0.24
TTC39A-216ENST00000530004 SLC48A1Q6P1K1 146 aa13.57□□□□□ -0.24
TTC39A-216ENST00000530004 ANGPTL8Q6UXH0 198 aa13.57□□□□□ -0.24
TTC39A-216ENST00000530004 LRRC74BQ6ZQY2 392 aa13.57□□□□□ -0.24
TTC39A-216ENST00000530004 PDSS2Q86YH6 399 aa13.57□□□□□ -0.24
TTC39A-216ENST00000530004 MARCH9Q86YJ5 346 aa13.57□□□□□ -0.24
TTC39A-216ENST00000530004 GOLM1Q8NBJ4 401 aa13.57□□□□□ -0.24
TTC39A-216ENST00000530004 OR5AK3PQ8NH89 298 aa13.57□□□□□ -0.24
TTC39A-216ENST00000530004 WDR36Q8NI36 951 aaKnown RBP13.57□□□□□ -0.24
TTC39A-216ENST00000530004 CANT1Q8WVQ1 401 aa13.57□□□□□ -0.24
TTC39A-216ENST00000530004 NRG4Q8WWG1 115 aa13.57□□□□□ -0.24
TTC39A-216ENST00000530004 SLCO4A1Q96BD0 722 aa13.57□□□□□ -0.24
TTC39A-216ENST00000530004 DUS3LQ96G46 650 aaKnown RBP13.57□□□□□ -0.24
TTC39A-216ENST00000530004 SPRTNQ9H040 489 aaPredicted RBP13.57□□□□□ -0.24
TTC39A-216ENST00000530004 CXorf36Q9H7Y0 433 aa13.57□□□□□ -0.24
TTC39A-216ENST00000530004 NEUROD4Q9HD90 331 aa13.57□□□□□ -0.24
TTC39A-216ENST00000530004 APMAPQ9HDC9 416 aa13.57□□□□□ -0.24
TTC39A-216ENST00000530004 FBXO8Q9NRD0 319 aa13.57□□□□□ -0.24
TTC39A-216ENST00000530004 ACSS1Q9NUB1 689 aaPredicted RBP13.57□□□□□ -0.24
TTC39A-216ENST00000530004 KCMF1Q9P0J7 381 aa13.57□□□□□ -0.24
TTC39A-216ENST00000530004 CES1P1Q9UKY3 287 aa13.57□□□□□ -0.24
TTC39A-216ENST00000530004 RARRES3Q9UL19 164 aa13.57□□□□□ -0.24
TTC39A-216ENST00000530004 DAPP1Q9UN19 280 aa13.57□□□□□ -0.24
TTC39A-216ENST00000530004 NAALAD2Q9Y3Q0 740 aa13.57□□□□□ -0.24
TTC39A-216ENST00000530004 AP4S1Q9Y587 144 aa13.57□□□□□ -0.24
TTC39A-216ENST00000530004 SNX8Q9Y5X2 465 aa13.57□□□□□ -0.24
TTC39A-216ENST00000530004 SLC22A7Q9Y694 548 aa13.57□□□□□ -0.24
TTC39A-216ENST00000530004 TCRBV5S2A0A599 114 aa13.56□□□□□ -0.24
TTC39A-216ENST00000530004 DHRS12A0PJE2 317 aa13.56□□□□□ -0.24
TTC39A-216ENST00000530004 CXCR6O00574 342 aa13.56□□□□□ -0.24
TTC39A-216ENST00000530004 POLR1CO15160 346 aaPredicted RBP13.56□□□□□ -0.24
TTC39A-216ENST00000530004 GALR3O60755 368 aaPredicted RBP13.56□□□□□ -0.24
TTC39A-216ENST00000530004 DNAJB6O75190 326 aa13.56□□□□□ -0.24
TTC39A-216ENST00000530004 OR2B3O76000 313 aa13.56□□□□□ -0.24
TTC39A-216ENST00000530004 CPN2P22792 545 aa13.56□□□□□ -0.24
TTC39A-216ENST00000530004 NTSP30990 170 aa13.56□□□□□ -0.24
TTC39A-216ENST00000530004 HOXD11P31277 338 aaPredicted RBP13.56□□□□□ -0.24
TTC39A-216ENST00000530004 CHI3L1P36222 383 aaPredicted RBP13.56□□□□□ -0.24
TTC39A-216ENST00000530004 ITGA1P56199 1179 aa13.56□□□□□ -0.24
TTC39A-216ENST00000530004 IL11RAQ14626 422 aa13.56□□□□□ -0.24
TTC39A-216ENST00000530004 MLC1Q15049 377 aa13.56□□□□□ -0.24
TTC39A-216ENST00000530004 RGNQ15493 299 aa13.56□□□□□ -0.24
TTC39A-216ENST00000530004 PRTGQ2VWP7 1150 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms