RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 RIT1Q92963 219 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 DTNBP1Q96EV8 351 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 ITCHQ96J02 903 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 SPSB2Q99619 263 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 SH3GL1Q99961 368 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 DUSP26Q9BV47 211 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 ALOXE3Q9BYJ1 711 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 VN1R1Q9GZP7 353 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 CLMPQ9H6B4 373 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 WDR70Q9NW82 654 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 ABI3Q9P2A4 366 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 PTGFRNQ9P2B2 879 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 CTSFQ9UBX1 484 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 PRODH2Q9UF12 536 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 BTNL2Q9UIR0 455 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 MRTO4Q9UKD2 239 aaKnown RBP7.45□□□□□ -1.22
SSBP3-211ENST00000528787 NDUFAF1Q9Y375 327 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 MRPS2Q9Y399 296 aaKnown RBP7.45□□□□□ -1.22
SSBP3-211ENST00000528787 GPR45Q9Y5Y3 372 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 FER1L5A0AVI2 2057 aa7.45□□□□□ -1.22
SSBP3-211ENST00000528787 A0A087WV62 115 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 IGKV3D-11A0A0A0MRZ8 115 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 NSG1A0A0A6YYJ2 146 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 A0A1W2PRB8 838 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 TMEM247A6NEH6 219 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 DUXAA6NLW8 204 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 CAPN14A8MX76 684 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 PRAMEF2O60811 474 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 HNRNPCL1O60812 293 aaKnown RBP7.44□□□□□ -1.22
SSBP3-211ENST00000528787 KLF7O75840 302 aaPredicted RBP7.44□□□□□ -1.22
SSBP3-211ENST00000528787 ANP32DO95626 131 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 GBAP04062 536 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 ALPPP05187 535 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 JUNP05412 331 aaKnown RBP7.44□□□□□ -1.22
SSBP3-211ENST00000528787 PGRP06401 933 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 SNRPB2P08579 225 aaKnown RBP7.44□□□□□ -1.22
SSBP3-211ENST00000528787 SFTPCP11686 197 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 CPMP14384 443 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 LIFP15018 202 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 NT5EP21589 574 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 PRDX6P30041 224 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 EIF2S3P41091 472 aaKnown RBP7.44□□□□□ -1.22
SSBP3-211ENST00000528787 RASSF2P50749 326 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 CLCN2P51788 898 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 HNRNPFP52597 415 aaKnown RBP7.44□□□□□ -1.22
SSBP3-211ENST00000528787 SEC24CP53992 1094 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 OLR1P78380 273 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 MRPS22P82650 360 aaKnown RBP7.44□□□□□ -1.22
SSBP3-211ENST00000528787 MAT1AQ00266 395 aaKnown RBP7.44□□□□□ -1.22
SSBP3-211ENST00000528787 RHAGQ02094 409 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 AIMP2Q13155 320 aaKnown RBP7.44□□□□□ -1.22
SSBP3-211ENST00000528787 CLN3Q13286 438 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 GNA13Q14344 377 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 PTGR1Q14914 329 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 CEBPEQ15744 281 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 MAPKAPK3Q16644 382 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 PGS1Q32NB8 556 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 MMEL1Q495T6 779 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 HLA-DQA1Q5Y7H0 255 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 C18orf63Q68DL7 685 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 TMEM64Q6YI46 380 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 SLC29A4Q7RTT9 530 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 PRSS41Q7RTY9 318 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 TIPARPQ7Z3E1 657 aaKnown RBP7.44□□□□□ -1.22
SSBP3-211ENST00000528787 CLNKQ7Z7G1 428 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 TICAM1Q8IUC6 712 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 TMEM151BQ8IW70 566 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 GALNT12Q8IXK2 581 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 RIMKLAQ8IXN7 391 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 LGI4Q8N135 537 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 RNF175Q8N4F7 328 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 OR5T3Q8NGG3 340 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 RFWD2Q8NHY2 731 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 RP9Q8TA86 221 aaKnown RBP7.44□□□□□ -1.22
SSBP3-211ENST00000528787 M1APQ8TC57 530 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 ZNF675Q8TD23 568 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 C10orf82Q8WW14 230 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 ZCCHC14Q8WYQ9 949 aaKnown RBP7.44□□□□□ -1.22
SSBP3-211ENST00000528787 TM9SF4Q92544 642 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 EXOSC8Q96B26 276 aaKnown RBP7.44□□□□□ -1.22
SSBP3-211ENST00000528787 COQ8BQ96D53 544 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 VMP1Q96GC9 406 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 OR52B2Q96RD2 323 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 OR52E6Q96RD3 313 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 EBF4Q9BQW3 602 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 ZNF700Q9H0M5 742 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 SOX17Q9H6I2 414 aaPredicted RBP7.44□□□□□ -1.22
SSBP3-211ENST00000528787 ATP13A2Q9NQ11 1180 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 LANCL2Q9NS86 450 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 GID8Q9NWU2 228 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 TEX10Q9NXF1 929 aaPredicted RBP7.44□□□□□ -1.22
SSBP3-211ENST00000528787 TAS2R9Q9NYW1 312 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 HEY2Q9UBP5 337 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 LEF1Q9UJU2 399 aaPredicted RBP7.44□□□□□ -1.22
SSBP3-211ENST00000528787 VPS4AQ9UN37 437 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 PTGDR2Q9Y5Y4 395 aa7.44□□□□□ -1.22
SSBP3-211ENST00000528787 CACNA1AO00555 2505 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 ACACAQ13085 2346 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 C15orf38-AP3S2A0A0A6YYH1 394 aa7.43□□□□□ -1.22
SSBP3-211ENST00000528787 LOC101059948A0A1B0GTJ6 334 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms