RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 H3BMH7 237 aa17.74■□□□□ 0.43
SMPD1-203ENST00000527275 RFPL3O75679 317 aa17.74■□□□□ 0.43
SMPD1-203ENST00000527275 MT-ND1P03886 318 aa17.74■□□□□ 0.43
SMPD1-203ENST00000527275 MSL3P1P0C860 447 aa17.74■□□□□ 0.43
SMPD1-203ENST00000527275 SMIM10L1P0DMW3 83 aa17.74■□□□□ 0.43
SMPD1-203ENST00000527275 RAP2AP10114 183 aa17.74■□□□□ 0.43
SMPD1-203ENST00000527275 HIST1H1TP22492 207 aaPredicted RBP17.74■□□□□ 0.43
SMPD1-203ENST00000527275 ATP5A1P25705 553 aaKnown RBP17.74■□□□□ 0.43
SMPD1-203ENST00000527275 BTN3A2P78410 334 aa17.74■□□□□ 0.43
SMPD1-203ENST00000527275 MRPS35P82673 323 aaKnown RBP17.74■□□□□ 0.43
SMPD1-203ENST00000527275 ILKQ13418 452 aa17.74■□□□□ 0.43
SMPD1-203ENST00000527275 ATP6AP1Q15904 470 aa17.74■□□□□ 0.43
SMPD1-203ENST00000527275 PPP4R4Q6NUP7 873 aa17.74■□□□□ 0.43
SMPD1-203ENST00000527275 ACOT4Q8N9L9 421 aa17.74■□□□□ 0.43
SMPD1-203ENST00000527275 DEFB124Q8NES8 71 aa17.74■□□□□ 0.43
SMPD1-203ENST00000527275 SMIM10Q96HG1 83 aa17.74■□□□□ 0.43
SMPD1-203ENST00000527275 QRFPRQ96P65 431 aa17.74■□□□□ 0.43
SMPD1-203ENST00000527275 DCAF13Q9NV06 445 aaKnown RBP17.74■□□□□ 0.43
SMPD1-203ENST00000527275 VPS4AQ9UN37 437 aa17.74■□□□□ 0.43
SMPD1-203ENST00000527275 AP4B1Q9Y6B7 739 aa17.74■□□□□ 0.43
SMPD1-203ENST00000527275 ARHGAP10A1A4S6 786 aa17.73■□□□□ 0.43
SMPD1-203ENST00000527275 C1orf226A1L170 272 aa17.73■□□□□ 0.43
SMPD1-203ENST00000527275 TMPRSS11DO60235 418 aa17.73■□□□□ 0.43
SMPD1-203ENST00000527275 OR2B3O76000 313 aa17.73■□□□□ 0.43
SMPD1-203ENST00000527275 UBTFL6P0CB48 400 aaPredicted RBP17.73■□□□□ 0.43
SMPD1-203ENST00000527275 ALOX12P18054 663 aa17.73■□□□□ 0.43
SMPD1-203ENST00000527275 IL1RNP18510 177 aa17.73■□□□□ 0.43
SMPD1-203ENST00000527275 ARFIP1P53367 373 aa17.73■□□□□ 0.43
SMPD1-203ENST00000527275 MAPK12P53778 367 aa17.73■□□□□ 0.43
SMPD1-203ENST00000527275 TGM3Q08188 693 aa17.73■□□□□ 0.43
SMPD1-203ENST00000527275 TCTE1Q5JU00 501 aa17.73■□□□□ 0.43
SMPD1-203ENST00000527275 ENPP6Q6UWR7 440 aa17.73■□□□□ 0.43
SMPD1-203ENST00000527275 ABHD13Q7L211 337 aa17.73■□□□□ 0.43
SMPD1-203ENST00000527275 PRSS41Q7RTY9 318 aa17.73■□□□□ 0.43
SMPD1-203ENST00000527275 OR1L3Q8NH93 324 aa17.73■□□□□ 0.43
SMPD1-203ENST00000527275 ZNF597Q96LX8 424 aa17.73■□□□□ 0.43
SMPD1-203ENST00000527275 ZNF282Q9UDV7 671 aaPredicted RBP17.73■□□□□ 0.43
SMPD1-203ENST00000527275 ADAM29Q9UKF5 820 aa17.73■□□□□ 0.43
SMPD1-203ENST00000527275 PCDHGB4Q9UN71 923 aa17.73■□□□□ 0.43
SMPD1-203ENST00000527275 WBP11Q9Y2W2 641 aaKnown RBP17.73■□□□□ 0.43
SMPD1-203ENST00000527275 ADAMTS20P59510 1910 aa17.73■□□□□ 0.43
SMPD1-203ENST00000527275 A0A0A6YYD5 115 aa17.73■□□□□ 0.43
SMPD1-203ENST00000527275 C7orf72A4D263 438 aa17.73■□□□□ 0.43
SMPD1-203ENST00000527275 KCNK5O95279 499 aa17.73■□□□□ 0.43
SMPD1-203ENST00000527275 MED26O95402 600 aa17.73■□□□□ 0.43
SMPD1-203ENST00000527275 LDLRP01130 860 aa17.73■□□□□ 0.43
SMPD1-203ENST00000527275 ABCB1P08183 1280 aaPredicted RBP17.73■□□□□ 0.43
SMPD1-203ENST00000527275 CERS1P27544 350 aa17.73■□□□□ 0.43
SMPD1-203ENST00000527275 TSFMP43897 325 aaKnown RBP17.73■□□□□ 0.43
SMPD1-203ENST00000527275 C16orf72Q14CZ0 275 aa17.73■□□□□ 0.43
SMPD1-203ENST00000527275 INTS11Q5TA45 600 aaKnown RBP17.73■□□□□ 0.43
SMPD1-203ENST00000527275 GPR155Q7Z3F1 870 aa17.73■□□□□ 0.43
SMPD1-203ENST00000527275 GOT1L1Q8NHS2 421 aaPredicted RBP17.73■□□□□ 0.43
SMPD1-203ENST00000527275 PNPT1Q8TCS8 783 aaKnown RBP17.73■□□□□ 0.43
SMPD1-203ENST00000527275 ZFP90Q8TF47 636 aa17.73■□□□□ 0.43
SMPD1-203ENST00000527275 CIDECQ96AQ7 238 aaPredicted RBP17.73■□□□□ 0.43
SMPD1-203ENST00000527275 ZNF501Q96CX3 271 aaPredicted RBP17.73■□□□□ 0.43
SMPD1-203ENST00000527275 SLC22A7Q9Y694 548 aa17.73■□□□□ 0.43
SMPD1-203ENST00000527275 HYKKA2RU49 373 aa17.72■□□□□ 0.43
SMPD1-203ENST00000527275 SOCS2O14508 198 aa17.72■□□□□ 0.43
SMPD1-203ENST00000527275 PPIBP23284 216 aaKnown RBP17.72■□□□□ 0.43
SMPD1-203ENST00000527275 E2F1Q01094 437 aa17.72■□□□□ 0.43
SMPD1-203ENST00000527275 INSM1Q01101 510 aaPredicted RBP17.72■□□□□ 0.43
SMPD1-203ENST00000527275 PDK3Q15120 406 aa17.72■□□□□ 0.43
SMPD1-203ENST00000527275 MPEG1Q2M385 716 aa17.72■□□□□ 0.43
SMPD1-203ENST00000527275 C6orf52Q5T4I8 152 aa17.72■□□□□ 0.43
SMPD1-203ENST00000527275 PRAMEF17Q5VTA0 474 aa17.72■□□□□ 0.43
SMPD1-203ENST00000527275 CPZQ66K79 652 aa17.72■□□□□ 0.43
SMPD1-203ENST00000527275 TMEM154Q6P9G4 183 aa17.72■□□□□ 0.43
SMPD1-203ENST00000527275 RBM44Q6ZP01 1051 aaKnown RBP17.72■□□□□ 0.43
SMPD1-203ENST00000527275 GLRX5Q86SX6 157 aa17.72■□□□□ 0.43
SMPD1-203ENST00000527275 CLEC4FQ8N1N0 589 aa17.72■□□□□ 0.43
SMPD1-203ENST00000527275 FAM86B1Q8N7N1 296 aa17.72■□□□□ 0.43
SMPD1-203ENST00000527275 TM4SF18Q96CE8 201 aa17.72■□□□□ 0.43
SMPD1-203ENST00000527275 C10orf90Q96M02 699 aa17.72■□□□□ 0.43
SMPD1-203ENST00000527275 C9orf16Q9BUW7 83 aa17.72■□□□□ 0.43
SMPD1-203ENST00000527275 YY1AP1Q9H869 796 aa17.72■□□□□ 0.43
SMPD1-203ENST00000527275 MIEF1Q9NQG6 463 aa17.72■□□□□ 0.43
SMPD1-203ENST00000527275 KIF26BQ2KJY2 2108 aa17.72■□□□□ 0.43
SMPD1-203ENST00000527275 FITM1A5D6W6 292 aa17.72■□□□□ 0.43
SMPD1-203ENST00000527275 PRKD3O94806 890 aa17.72■□□□□ 0.43
SMPD1-203ENST00000527275 C6orf47O95873 294 aa17.72■□□□□ 0.43
SMPD1-203ENST00000527275 SERPINA1P01009 418 aa17.72■□□□□ 0.43
SMPD1-203ENST00000527275 CSTF2P33240 577 aaKnown RBP eCLIP17.72■□□□□ 0.43
SMPD1-203ENST00000527275 LIMK1P53667 647 aa17.72■□□□□ 0.43
SMPD1-203ENST00000527275 CLDN6P56747 220 aa17.72■□□□□ 0.43
SMPD1-203ENST00000527275 HBA1P69905 142 aa17.72■□□□□ 0.43
SMPD1-203ENST00000527275 SLAMF1Q13291 335 aa17.72■□□□□ 0.43
SMPD1-203ENST00000527275 TRA2AQ13595 282 aaKnown RBP eCLIP17.72■□□□□ 0.43
SMPD1-203ENST00000527275 PRSS53Q2L4Q9 553 aa17.72■□□□□ 0.43
SMPD1-203ENST00000527275 ERICH5Q6P6B1 374 aa17.72■□□□□ 0.43
SMPD1-203ENST00000527275 ZZZ3Q8IYH5 903 aa17.72■□□□□ 0.43
SMPD1-203ENST00000527275 MMP21Q8N119 569 aa17.72■□□□□ 0.43
SMPD1-203ENST00000527275 CBR4Q8N4T8 237 aa17.72■□□□□ 0.43
SMPD1-203ENST00000527275 OR6C1Q96RD1 312 aa17.72■□□□□ 0.43
SMPD1-203ENST00000527275 BDH2Q9BUT1 245 aa17.72■□□□□ 0.43
SMPD1-203ENST00000527275 OCIAD1Q9NX40 245 aa17.72■□□□□ 0.43
SMPD1-203ENST00000527275 SERTAD3Q9UJW9 196 aa17.72■□□□□ 0.43
SMPD1-203ENST00000527275 OAZ3Q9UMX2 235 aa17.72■□□□□ 0.43
SMPD1-203ENST00000527275 CORO2BQ9UQ03 480 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms