RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 ZNF750Q32MQ0 723 aa17.2■□□□□ 0.34
CAPN1-203ENST00000525013 C10orf62Q5T681 223 aaPredicted RBP17.2■□□□□ 0.34
CAPN1-203ENST00000525013 ADGRD1Q6QNK2 874 aa17.2■□□□□ 0.34
CAPN1-203ENST00000525013 TIFABQ6ZNK6 161 aa17.2■□□□□ 0.34
CAPN1-203ENST00000525013 MRGPRGQ86SM5 289 aa17.2■□□□□ 0.34
CAPN1-203ENST00000525013 ST13P4Q8IZP2 240 aaPredicted RBP17.2■□□□□ 0.34
CAPN1-203ENST00000525013 ITLN2Q8WWU7 325 aaPredicted RBP17.2■□□□□ 0.34
CAPN1-203ENST00000525013 ART5Q96L15 291 aa17.2■□□□□ 0.34
CAPN1-203ENST00000525013 ZNF835Q9Y2P0 537 aa17.2■□□□□ 0.34
CAPN1-203ENST00000525013 NINQ8N4C6 2090 aa17.2■□□□□ 0.34
CAPN1-203ENST00000525013 PKDREJQ9NTG1 2253 aa17.19■□□□□ 0.34
CAPN1-203ENST00000525013 CACNA1CQ13936 2221 aa17.19■□□□□ 0.34
CAPN1-203ENST00000525013 IQANK1A0A1B0GTG1 560 aa17.19■□□□□ 0.34
CAPN1-203ENST00000525013 ARHGAP10A1A4S6 786 aa17.19■□□□□ 0.34
CAPN1-203ENST00000525013 PRSS44E7EML9 344 aa17.19■□□□□ 0.34
CAPN1-203ENST00000525013 G3V3Y1 287 aa17.19■□□□□ 0.34
CAPN1-203ENST00000525013 PPP6CO00743 305 aa17.19■□□□□ 0.34
CAPN1-203ENST00000525013 KLK1P06870 262 aa17.19■□□□□ 0.34
CAPN1-203ENST00000525013 SBK3P0C264 359 aa17.19■□□□□ 0.34
CAPN1-203ENST00000525013 ASPHQ12797 758 aa17.19■□□□□ 0.34
CAPN1-203ENST00000525013 SLC29A2Q14542 456 aa17.19■□□□□ 0.34
CAPN1-203ENST00000525013 ZNF267Q14586 743 aaPredicted RBP17.19■□□□□ 0.34
CAPN1-203ENST00000525013 OPN5Q6U736 354 aa17.19■□□□□ 0.34
CAPN1-203ENST00000525013 RPTNQ6XPR3 784 aa17.19■□□□□ 0.34
CAPN1-203ENST00000525013 Q6ZPB1 254 aaPredicted RBP17.19■□□□□ 0.34
CAPN1-203ENST00000525013 PAGE2Q7Z2X7 111 aa17.19■□□□□ 0.34
CAPN1-203ENST00000525013 TMEM151AQ8N4L1 468 aa17.19■□□□□ 0.34
CAPN1-203ENST00000525013 ZFP62Q8NB50 900 aaPredicted RBP17.19■□□□□ 0.34
CAPN1-203ENST00000525013 ZNF483Q8TF39 744 aaPredicted RBP17.19■□□□□ 0.34
CAPN1-203ENST00000525013 RIT1Q92963 219 aa17.19■□□□□ 0.34
CAPN1-203ENST00000525013 UCN3Q969E3 161 aa17.19■□□□□ 0.34
CAPN1-203ENST00000525013 FBXL20Q96IG2 436 aa17.19■□□□□ 0.34
CAPN1-203ENST00000525013 PELOQ9BRX2 385 aaKnown RBP17.19■□□□□ 0.34
CAPN1-203ENST00000525013 MRPL1Q9BYD6 325 aaKnown RBP17.19■□□□□ 0.34
CAPN1-203ENST00000525013 DEPPQ9NTK1 212 aa17.19■□□□□ 0.34
CAPN1-203ENST00000525013 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.19■□□□□ 0.34
CAPN1-203ENST00000525013 TMEM216Q9P0N5 145 aa17.19■□□□□ 0.34
CAPN1-203ENST00000525013 SLC12A4Q9UP95 1085 aa17.19■□□□□ 0.34
CAPN1-203ENST00000525013 NCOA6Q14686 2063 aaPredicted RBP17.19■□□□□ 0.34
CAPN1-203ENST00000525013 CREBBPQ92793 2442 aa17.18■□□□□ 0.34
CAPN1-203ENST00000525013 A0A1B0GTL3 188 aa17.18■□□□□ 0.34
CAPN1-203ENST00000525013 GOLGA8RI6L899 631 aa17.18■□□□□ 0.34
CAPN1-203ENST00000525013 IGKV3-11P04433 115 aa17.18■□□□□ 0.34
CAPN1-203ENST00000525013 HERVK_113P63132 956 aa17.18■□□□□ 0.34
CAPN1-203ENST00000525013 ERVK-8P63133 956 aa17.18■□□□□ 0.34
CAPN1-203ENST00000525013 PLGLB1Q02325 96 aa17.18■□□□□ 0.34
CAPN1-203ENST00000525013 GGTA1PQ4G0N0 100 aa17.18■□□□□ 0.34
CAPN1-203ENST00000525013 CCNYL2Q5T2Q4 361 aa17.18■□□□□ 0.34
CAPN1-203ENST00000525013 OR52E8Q6IFG1 317 aa17.18■□□□□ 0.34
CAPN1-203ENST00000525013 LETMD1Q6P1Q0 360 aa17.18■□□□□ 0.34
CAPN1-203ENST00000525013 RTL4Q6ZR62 310 aa17.18■□□□□ 0.34
CAPN1-203ENST00000525013 C9orf40Q8IXQ3 194 aa17.18■□□□□ 0.34
CAPN1-203ENST00000525013 GSPT2Q8IYD1 628 aaKnown RBP17.18■□□□□ 0.34
CAPN1-203ENST00000525013 ZNF808Q8N4W9 903 aaPredicted RBP17.18■□□□□ 0.34
CAPN1-203ENST00000525013 TRPC4APQ8TEL6 797 aa17.18■□□□□ 0.34
CAPN1-203ENST00000525013 SELENOMQ8WWX9 145 aa17.18■□□□□ 0.34
CAPN1-203ENST00000525013 GAL3ST4Q96RP7 486 aa17.18■□□□□ 0.34
CAPN1-203ENST00000525013 ERVK-6Q9BXR3 956 aa17.18■□□□□ 0.34
CAPN1-203ENST00000525013 FARSBQ9NSD9 589 aaKnown RBP17.18■□□□□ 0.34
CAPN1-203ENST00000525013 TEX10Q9NXF1 929 aaPredicted RBP17.18■□□□□ 0.34
CAPN1-203ENST00000525013 PSMC3IPQ9P2W1 217 aaPredicted RBP17.18■□□□□ 0.34
CAPN1-203ENST00000525013 TBK1Q9UHD2 729 aa17.18■□□□□ 0.34
CAPN1-203ENST00000525013 ERVK-19Q9WJR5 959 aa17.18■□□□□ 0.34
CAPN1-203ENST00000525013 A0A0G2JMM0 328 aa17.17■□□□□ 0.34
CAPN1-203ENST00000525013 A0A1W2PPB8 328 aa17.17■□□□□ 0.34
CAPN1-203ENST00000525013 A0A1W2PRS3 328 aa17.17■□□□□ 0.34
CAPN1-203ENST00000525013 KIR3DP1A8MWS1 328 aa17.17■□□□□ 0.34
CAPN1-203ENST00000525013 PRRG2O14669 202 aa17.17■□□□□ 0.34
CAPN1-203ENST00000525013 PGRMC2O15173 223 aa17.17■□□□□ 0.34
CAPN1-203ENST00000525013 ZNF354AO60765 605 aaPredicted RBP17.17■□□□□ 0.34
CAPN1-203ENST00000525013 PDE9AO76083 593 aa17.17■□□□□ 0.34
CAPN1-203ENST00000525013 SUPT7LO94864 414 aa17.17■□□□□ 0.34
CAPN1-203ENST00000525013 PIK3R1P27986 724 aa17.17■□□□□ 0.34
CAPN1-203ENST00000525013 SMSP52788 366 aa17.17■□□□□ 0.34
CAPN1-203ENST00000525013 PPIAP62937 165 aaKnown RBP17.17■□□□□ 0.34
CAPN1-203ENST00000525013 CLCQ05315 142 aa17.17■□□□□ 0.34
CAPN1-203ENST00000525013 ART3Q13508 389 aa17.17■□□□□ 0.34
CAPN1-203ENST00000525013 MPEG1Q2M385 716 aa17.17■□□□□ 0.34
CAPN1-203ENST00000525013 PIGGQ5H8A4 983 aa17.17■□□□□ 0.34
CAPN1-203ENST00000525013 SP5Q6BEB4 398 aaPredicted RBP17.17■□□□□ 0.34
CAPN1-203ENST00000525013 C3P1Q6ZMU1 363 aa17.17■□□□□ 0.34
CAPN1-203ENST00000525013 BNC2Q6ZN30 1099 aaPredicted RBP17.17■□□□□ 0.34
CAPN1-203ENST00000525013 RNF111Q6ZNA4 994 aa17.17■□□□□ 0.34
CAPN1-203ENST00000525013 SLC29A4Q7RTT9 530 aa17.17■□□□□ 0.34
CAPN1-203ENST00000525013 LRRN4CLQ8ND94 238 aa17.17■□□□□ 0.34
CAPN1-203ENST00000525013 OR2M7Q8NG81 312 aa17.17■□□□□ 0.34
CAPN1-203ENST00000525013 C16orf52Q8NHV5 167 aa17.17■□□□□ 0.34
CAPN1-203ENST00000525013 NUBPLQ8TB37 319 aa17.17■□□□□ 0.34
CAPN1-203ENST00000525013 SLC22A8Q8TCC7 542 aa17.17■□□□□ 0.34
CAPN1-203ENST00000525013 AGAP11Q8TF27 550 aa17.17■□□□□ 0.34
CAPN1-203ENST00000525013 SGCZQ96LD1 299 aa17.17■□□□□ 0.34
CAPN1-203ENST00000525013 C1QTNF3Q9BXJ4 246 aa17.17■□□□□ 0.34
CAPN1-203ENST00000525013 DEFB127Q9H1M4 99 aa17.17■□□□□ 0.34
CAPN1-203ENST00000525013 ADAM29Q9UKF5 820 aa17.17■□□□□ 0.34
CAPN1-203ENST00000525013 SNX6Q9UNH7 406 aa17.17■□□□□ 0.34
CAPN1-203ENST00000525013 MEMO1Q9Y316 297 aa17.17■□□□□ 0.34
CAPN1-203ENST00000525013 A0A1B0GTH9 108 aa17.16■□□□□ 0.34
CAPN1-203ENST00000525013 PINLYPA6NC86 204 aa17.16■□□□□ 0.34
CAPN1-203ENST00000525013 FAM166BA8MTA8 275 aa17.16■□□□□ 0.34
CAPN1-203ENST00000525013 DLX3O60479 287 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms