RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-223	ENST00000523125	SCYL1	Q96KG9	808 aa		11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125	DGAT2	Q96PD7	388 aa		11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125	MRPL57	Q9BQC6	102 aa	Known RBP	11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125	HPF1	Q9NWY4	346 aa		11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125	LYAR	Q9NX58	379 aa	Known RBP	11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125	HRH3	Q9Y5N1	445 aa		11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125	KLF2	Q9Y5W3	355 aa	Predicted RBP	11.46	□□□□□ -0.57
VEGFA-223	ENST00000523125	PKDREJ	Q9NTG1	2253 aa		11.46	□□□□□ -0.58
VEGFA-223	ENST00000523125		A0A1B0GTH9	108 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125		A0A1W2PS29	197 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125		A8MT66	165 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	KIF2A	O00139	706 aa	Predicted RBP	11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	TFEC	O14948	347 aa	Predicted RBP	11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	PGRMC2	O15173	223 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	SMIM24	O75264	130 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	SEMA3D	O95025	777 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	NADK	O95544	446 aa	Predicted RBP	11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	AIFM1	O95831	613 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	ABHD2	P08910	425 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	SNRPA	P09012	282 aa	Known RBP	11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	FAM153B	P0C7A2	387 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	PRF1	P14222	555 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	COX7A2	P14406	83 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	ALOX15	P16050	662 aa	Predicted RBP	11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	ABO	P16442	354 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	BUD31	P41223	144 aa	Predicted RBP	11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	PLIN5	Q00G26	463 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	MPEG1	Q2M385	716 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	ZNF791	Q3KP31	576 aa	Predicted RBP	11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	FAM153C	Q494X1	144 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	PIGG	Q5H8A4	983 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	FRG2	Q64ET8	278 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	LETMD1	Q6P1Q0	360 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	XKRX	Q6PP77	449 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	ADGRD1	Q6QNK2	874 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	CYP20A1	Q6UW02	462 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	LYPD8	Q6UX82	237 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	C3P1	Q6ZMU1	363 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	TIFAB	Q6ZNK6	161 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	ST13P4	Q8IZP2	240 aa	Predicted RBP	11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	OR4F6	Q8NGB9	312 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	OR5L2	Q8NGL0	311 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	KIF18A	Q8NI77	898 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	ZNF483	Q8TF39	744 aa	Predicted RBP	11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	ATP6V1E2	Q96A05	226 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	FRG2B	Q96QU4	278 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	DMRTA2	Q96SC8	542 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	SERPINI1	Q99574	410 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	C1QTNF3	Q9BXJ4	246 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	TXLNGY	Q9BZA5	131 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	MRPL46	Q9H2W6	279 aa	Known RBP	11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	SEMA4B	Q9NPR2	832 aa	Predicted RBP	11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	FARSB	Q9NSD9	589 aa	Known RBP	11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	TEX10	Q9NXF1	929 aa	Predicted RBP	11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	COPS7A	Q9UBW8	275 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	ZNF225	Q9UK10	706 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	ABCA12	Q86UK0	2595 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	ARHGAP21	Q5T5U3	1957 aa		11.45	□□□□□ -0.58
VEGFA-223	ENST00000523125	EXOC1L	A0A1B0GW35	172 aa		11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	ARHGAP10	A1A4S6	786 aa		11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125		G3V3Y1	287 aa		11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	RIPK2	O43353	540 aa		11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	HNRNPR	O43390	633 aa	Known RBP	11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	GLS	O94925	669 aa	Predicted RBP	11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	CLPS	P04118	112 aa		11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	CCL3	P10147	92 aa		11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	NR2F6	P10588	404 aa		11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	ESRRA	P11474	423 aa	Predicted RBP	11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	TSPAN8	P19075	237 aa		11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	AGA	P20933	346 aa		11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	CNR1	P21554	472 aa		11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	ARL1	P40616	181 aa	Predicted RBP	11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	CDH13	P55290	713 aa		11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	SLC37A1	P57057	533 aa		11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	FOXO1	Q12778	655 aa		11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	ASPH	Q12797	758 aa		11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	ZNF630	Q2M218	657 aa	Predicted RBP	11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	SPRED3	Q2MJR0	410 aa		11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	GGTA1P	Q4G0N0	100 aa		11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	OPN5	Q6U736	354 aa		11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	RTL4	Q6ZR62	310 aa		11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	TRMT10C	Q7L0Y3	403 aa	Known RBP	11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	MILR1	Q7Z6M3	343 aa		11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	NUDT13	Q86X67	352 aa		11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	TICAM1	Q8IUC6	712 aa		11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	IFT20	Q8IY31	132 aa		11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	CEP112	Q8N8E3	955 aa		11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	GOLM1	Q8NBJ4	401 aa		11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	NUBPL	Q8TB37	319 aa		11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	FAM57A	Q8TBR7	257 aa		11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	MARVELD3	Q96A59	401 aa		11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	SGCZ	Q96LD1	299 aa		11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	MRPL1	Q9BYD6	325 aa	Known RBP	11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	DEFB127	Q9H1M4	99 aa		11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	EPB41L4B	Q9H329	900 aa		11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	ZDHHC11	Q9H8X9	412 aa		11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	SH2D2A	Q9NP31	389 aa		11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125	TMEM216	Q9P0N5	145 aa		11.44	□□□□□ -0.58
VEGFA-223	ENST00000523125		E9PLN8	166 aa		11.43	□□□□□ -0.58
VEGFA-223	ENST00000523125	CDC40	O60508	579 aa	Known RBP eCLIP	11.43	□□□□□ -0.58	2e-13	■■□□□ 11.5

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