RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 WBP1Q96G27 269 aa3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 ACCSQ96QU6 501 aa3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 GFRA4Q9GZZ7 299 aa3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 NDUFA13Q9P0J0 144 aa3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 LHX3Q9UBR4 397 aa3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 KLK11Q9UBX7 282 aa3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 CACNG5Q9UF02 275 aa3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 MRTO4Q9UKD2 239 aaKnown RBP3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 NOTCH3Q9UM47 2321 aa3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 CSNK1G3Q9Y6M4 447 aa3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 U3KQV3 271 aa3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 ATP8B3O60423 1300 aa3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 TRBV5-4A0A0C4DH59 114 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 NDUFA7O95182 113 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 APBB3O95704 486 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 FCER2P06734 321 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 GSTA2P09210 222 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 MTIF2P46199 727 aaKnown RBP3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 NDST1P52848 882 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 HSD17B7P56937 341 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 KRTAP10-5P60370 271 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 GMFBP60983 142 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 ERVK11-1P61568 191 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 PMP22Q01453 160 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 GABPB1Q06547 395 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 PDZK1IP1Q13113 114 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 KLF5Q13887 457 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 UPP1Q16831 310 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 RFTN2Q52LD8 501 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 AGKQ53H12 422 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 HIST2H2AA3Q6FI13 130 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 RAET1GQ6H3X3 334 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 IRGCQ6NXR0 463 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 KIF6Q6ZMV9 814 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 Q6ZRG5 221 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 KRTAP7-1Q8IUC3 87 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 RAB42Q8N4Z0 105 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 CERS5Q8N5B7 392 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 LRRC17Q8N6Y2 441 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 BCORP1Q8N888 145 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 ANKRD20A12PQ8NF67 263 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 ZNF397Q8NF99 534 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 OR52B4Q8NGK2 314 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 RPLP0P6Q8NHW5 317 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 ATP8B4Q8TF62 1192 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 CHPT1Q8WUD6 406 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 CNRIP1Q96F85 164 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 CXorf58Q96LI9 332 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 CLEC7AQ9BXN2 247 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 MED20Q9H944 212 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 FGF22Q9HCT0 170 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 IL1RAPQ9NPH3 570 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 HOMER3Q9NSC5 361 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 MIOXQ9UGB7 285 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 ASIC3Q9UHC3 531 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 LNPEPQ9UIQ6 1025 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 PLA2G4CQ9UP65 541 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 AURKCQ9UQB9 309 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 ATG4BQ9Y4P1 393 aa3.9□□□□□ -1.79
HMGB1P1-201ENST00000522557 A0A1B0GWJ7 208 aa3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 OR5H15A6NDH6 313 aa3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 YJEFN3A6XGL0 299 aa3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 K7EQG2 157 aa3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 ATP6V1G1O75348 118 aa3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 MTRF1O75570 445 aaKnown RBP3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 TOXO94900 526 aa3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 IGLV1-44P01699 117 aa3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 PTMAP06454 111 aaKnown RBP3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 HEXBP07686 556 aa3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 ZSCAN5DPP0CG00 497 aa3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 GP9P14770 177 aa3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 DESP17661 470 aa3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 PRDX2P32119 198 aa3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 MMP12P39900 470 aa3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 MAGEA4P43358 317 aa3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 VEGFCP49767 419 aa3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 PRELPP51888 382 aa3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 NDST2P52849 883 aa3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 KRTAP10-12P60413 245 aa3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 MLF2Q15773 248 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 HLA-BQ31612 363 aa3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 ZNF699Q32M78 642 aa3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 DCAF12Q5T6F0 453 aa3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 IL23RQ5VWK5 629 aa3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 WDR25Q64LD2 544 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 ABRAXAS1Q6UWZ7 409 aa3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 PAQR9Q6ZVX9 377 aa3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 OR4F5Q8NH21 305 aa3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 MRPL24Q96A35 216 aaKnown RBP3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 SLC25A36Q96CQ1 311 aa3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 WRAP53Q9BUR4 548 aaKnown RBP3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 BARHL1Q9BZE3 327 aa3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 RAB17Q9H0T7 212 aa3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 HPS4Q9NQG7 708 aa3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 BARHL2Q9NY43 387 aa3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 COPS7AQ9UBW8 275 aa3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 CLIP2Q9UDT6 1046 aa3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 PLCL2Q9UPR0 1127 aa3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 RNF215Q9Y6U7 377 aa3.89□□□□□ -1.79
HMGB1P1-201ENST00000522557 CECR2Q9BXF3 1484 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms