RNA–Protein interactions for RNA: ENST00000522539.1

BRF2-204, Transcript of BRF2, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF2, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2-204ENST00000522539 PRDM7Q9NQW5 492 aa11.32□□□□□ -0.6
BRF2-204ENST00000522539 ALKBH4Q9NXW9 302 aa11.32□□□□□ -0.6
BRF2-204ENST00000522539 GRHL1Q9NZI5 618 aa11.32□□□□□ -0.6
BRF2-204ENST00000522539 SLC17A6Q9P2U8 582 aa11.32□□□□□ -0.6
BRF2-204ENST00000522539 NCKAP5O14513 1909 aa11.31□□□□□ -0.6
BRF2-204ENST00000522539 AHRRA9YTQ3 701 aa11.31□□□□□ -0.6
BRF2-204ENST00000522539 KDM4EB2RXH2 506 aaPredicted RBP11.31□□□□□ -0.6
BRF2-204ENST00000522539 CDC7O00311 574 aa11.31□□□□□ -0.6
BRF2-204ENST00000522539 PRAMEF4O60810 478 aa11.31□□□□□ -0.6
BRF2-204ENST00000522539 H2AFYO75367 372 aaKnown RBP11.31□□□□□ -0.6
BRF2-204ENST00000522539 HEXAP06865 529 aa11.31□□□□□ -0.6
BRF2-204ENST00000522539 HPDP32754 393 aaPredicted RBP11.31□□□□□ -0.6
BRF2-204ENST00000522539 PLA2G16P53816 162 aa11.31□□□□□ -0.6
BRF2-204ENST00000522539 SORDQ00796 357 aa11.31□□□□□ -0.6
BRF2-204ENST00000522539 ASPHQ12797 758 aa11.31□□□□□ -0.6
BRF2-204ENST00000522539 STX4Q12846 297 aa11.31□□□□□ -0.6
BRF2-204ENST00000522539 KEAP1Q14145 624 aa11.31□□□□□ -0.6
BRF2-204ENST00000522539 PRAMEF9Q5VWM5 478 aa11.31□□□□□ -0.6
BRF2-204ENST00000522539 TRIM40Q6P9F5 258 aa11.31□□□□□ -0.6
BRF2-204ENST00000522539 ZDHHC24Q6UX98 284 aa11.31□□□□□ -0.6
BRF2-204ENST00000522539 LACC1Q8IV20 430 aa11.31□□□□□ -0.6
BRF2-204ENST00000522539 IGDCC3Q8IVU1 814 aa11.31□□□□□ -0.6
BRF2-204ENST00000522539 C9orf40Q8IXQ3 194 aa11.31□□□□□ -0.6
BRF2-204ENST00000522539 PPIL6Q8IXY8 311 aa11.31□□□□□ -0.6
BRF2-204ENST00000522539 DND1Q8IYX4 353 aaKnown RBP11.31□□□□□ -0.6
BRF2-204ENST00000522539 SLC15A4Q8N697 577 aa11.31□□□□□ -0.6
BRF2-204ENST00000522539 SREK1Q8WXA9 508 aaKnown RBP11.31□□□□□ -0.6
BRF2-204ENST00000522539 ANKRD9Q96BM1 317 aaPredicted RBP11.31□□□□□ -0.6
BRF2-204ENST00000522539 SPACA9Q96E40 222 aaPredicted RBP11.31□□□□□ -0.6
BRF2-204ENST00000522539 NAT9Q9BTE0 207 aa11.31□□□□□ -0.6
BRF2-204ENST00000522539 TSPYL1Q9H0U9 437 aa11.31□□□□□ -0.6
BRF2-204ENST00000522539 SLC6A15Q9H2J7 730 aa11.31□□□□□ -0.6
BRF2-204ENST00000522539 ZDHHC18Q9NUE0 388 aa11.31□□□□□ -0.6
BRF2-204ENST00000522539 FAM53CQ9NYF3 392 aa11.31□□□□□ -0.6
BRF2-204ENST00000522539 JKAMPQ9P055 326 aa11.31□□□□□ -0.6
BRF2-204ENST00000522539 BOKQ9UMX3 212 aaPredicted RBP11.31□□□□□ -0.6
BRF2-204ENST00000522539 OARD1Q9Y530 152 aa11.31□□□□□ -0.6
BRF2-204ENST00000522539 CHCHD2Q9Y6H1 151 aaPredicted RBP11.31□□□□□ -0.6
BRF2-204ENST00000522539 IKBKGQ9Y6K9 419 aa11.31□□□□□ -0.6
BRF2-204ENST00000522539 MYOCOSA0A1B0GUC4 107 aa11.3□□□□□ -0.6
BRF2-204ENST00000522539 TUBAL3A6NHL2 446 aa11.3□□□□□ -0.6
BRF2-204ENST00000522539 DNALI1O14645 258 aaPredicted RBP11.3□□□□□ -0.6
BRF2-204ENST00000522539 RRP9O43818 475 aaKnown RBP11.3□□□□□ -0.6
BRF2-204ENST00000522539 LDB3O75112 727 aa11.3□□□□□ -0.6
BRF2-204ENST00000522539 SCELO95171 688 aa11.3□□□□□ -0.6
BRF2-204ENST00000522539 CD53P19397 219 aa11.3□□□□□ -0.6
BRF2-204ENST00000522539 GDF5P43026 501 aa11.3□□□□□ -0.6
BRF2-204ENST00000522539 ZNF136P52737 540 aa11.3□□□□□ -0.6
BRF2-204ENST00000522539 CRYZQ08257 329 aaKnown RBP11.3□□□□□ -0.6
BRF2-204ENST00000522539 SLMAPQ14BN4 828 aa11.3□□□□□ -0.6
BRF2-204ENST00000522539 C18orf21Q32NC0 220 aaPredicted RBP11.3□□□□□ -0.6
BRF2-204ENST00000522539 MSS51Q4VC12 460 aa11.3□□□□□ -0.6
BRF2-204ENST00000522539 ADNP2Q6IQ32 1131 aa11.3□□□□□ -0.6
BRF2-204ENST00000522539 CLEC9AQ6UXN8 241 aa11.3□□□□□ -0.6
BRF2-204ENST00000522539 ZNF793Q6ZN11 406 aa11.3□□□□□ -0.6
BRF2-204ENST00000522539 Q71RC1 249 aaPredicted RBP11.3□□□□□ -0.6
BRF2-204ENST00000522539 UBE3DQ7Z6J8 389 aa11.3□□□□□ -0.6
BRF2-204ENST00000522539 KRT78Q8N1N4 520 aa11.3□□□□□ -0.6
BRF2-204ENST00000522539 GOLGA6L1Q8N7Z2 621 aa11.3□□□□□ -0.6
BRF2-204ENST00000522539 C7orf57Q8NEG2 295 aa11.3□□□□□ -0.6
BRF2-204ENST00000522539 FBXO25Q8TCJ0 367 aa11.3□□□□□ -0.6
BRF2-204ENST00000522539 UBLCP1Q8WVY7 318 aaPredicted RBP11.3□□□□□ -0.6
BRF2-204ENST00000522539 CCT6BQ92526 530 aa11.3□□□□□ -0.6
BRF2-204ENST00000522539 RHBDF1Q96CC6 855 aa11.3□□□□□ -0.6
BRF2-204ENST00000522539 WDR34Q96EX3 536 aa11.3□□□□□ -0.6
BRF2-204ENST00000522539 CAPS2Q9BXY5 557 aa11.3□□□□□ -0.6
BRF2-204ENST00000522539 PRDM14Q9GZV8 571 aa11.3□□□□□ -0.6
BRF2-204ENST00000522539 EXO5Q9H790 373 aa11.3□□□□□ -0.6
BRF2-204ENST00000522539 NEUROD4Q9HD90 331 aa11.3□□□□□ -0.6
BRF2-204ENST00000522539 BEX4Q9NWD9 120 aaPredicted RBP11.3□□□□□ -0.6
BRF2-204ENST00000522539 GPRC5BQ9NZH0 403 aa11.3□□□□□ -0.6
BRF2-204ENST00000522539 CNIH4Q9P003 139 aa11.3□□□□□ -0.6
BRF2-204ENST00000522539 COPS7AQ9UBW8 275 aa11.3□□□□□ -0.6
BRF2-204ENST00000522539 CNOT11Q9UKZ1 510 aaKnown RBP11.3□□□□□ -0.6
BRF2-204ENST00000522539 ZNF490Q9ULM2 529 aaPredicted RBP11.3□□□□□ -0.6
BRF2-204ENST00000522539 A0A1W2PPR1 153 aa11.29□□□□□ -0.6
BRF2-204ENST00000522539 ANKRD33BA6NCL7 494 aa11.29□□□□□ -0.6
BRF2-204ENST00000522539 NPEPPSL1A6NEC2 478 aa11.29□□□□□ -0.6
BRF2-204ENST00000522539 ANKDD1BA6NHY2 528 aa11.29□□□□□ -0.6
BRF2-204ENST00000522539 TRIM3O75382 744 aaPredicted RBP11.29□□□□□ -0.6
BRF2-204ENST00000522539 BANF1O75531 89 aa11.29□□□□□ -0.6
BRF2-204ENST00000522539 WDR47O94967 919 aa11.29□□□□□ -0.6
BRF2-204ENST00000522539 C1QAP02745 245 aa11.29□□□□□ -0.6
BRF2-204ENST00000522539 HRGP04196 525 aa11.29□□□□□ -0.6
BRF2-204ENST00000522539 FBXO45P0C2W1 286 aa11.29□□□□□ -0.6
BRF2-204ENST00000522539 TNNI3P19429 210 aa11.29□□□□□ -0.6
BRF2-204ENST00000522539 GGT5P36269 586 aa11.29□□□□□ -0.6
BRF2-204ENST00000522539 STT3AP46977 705 aa11.29□□□□□ -0.6
BRF2-204ENST00000522539 KCNC1P48547 511 aa11.29□□□□□ -0.6
BRF2-204ENST00000522539 DCAF7P61962 342 aa11.29□□□□□ -0.6
BRF2-204ENST00000522539 KCNJ2P63252 427 aa11.29□□□□□ -0.6
BRF2-204ENST00000522539 DUSP8Q13202 625 aa11.29□□□□□ -0.6
BRF2-204ENST00000522539 E2F2Q14209 437 aa11.29□□□□□ -0.6
BRF2-204ENST00000522539 PRAMEF20Q5VT98 475 aa11.29□□□□□ -0.6
BRF2-204ENST00000522539 SHEQ5VZ18 495 aa11.29□□□□□ -0.6
BRF2-204ENST00000522539 NSUN5P2Q63ZY6 315 aa11.29□□□□□ -0.6
BRF2-204ENST00000522539 TMEM198Q66K66 360 aa11.29□□□□□ -0.6
BRF2-204ENST00000522539 CHSY3Q70JA7 882 aa11.29□□□□□ -0.6
BRF2-204ENST00000522539 ADAMTSL2Q86TH1 951 aa11.29□□□□□ -0.6
BRF2-204ENST00000522539 CXorf67Q86X51 503 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 329 ms