RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 KDELC1Q6UW63 502 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 KIF18BQ86Y91 864 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 SPERTQ8NA61 448 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 OR9I1Q8NGQ6 314 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 SPPL3Q8TCT6 385 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 ASPNQ9BXN1 380 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 SLC12A9Q9BXP2 914 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 MTG2Q9H4K7 406 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 TREM1Q9NP99 234 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 NUDT15Q9NV35 164 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 PAK1IP1Q9NWT1 392 aaPredicted RBP15.5■□□□□ 0.07
USP42-207ENST00000521713 RABL2AQ9UBK7 228 aaPredicted RBP15.5■□□□□ 0.07
USP42-207ENST00000521713 RABL2BQ9UNT1 228 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 IFT52Q9Y366 437 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 RPS15P62841 145 aaKnown RBP15.5■□□□□ 0.07
USP42-207ENST00000521713 RELAQ04206 551 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 MGAT3Q09327 533 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 UNC50Q53HI1 259 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 SDR16C5Q8N3Y7 309 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 TMEM80Q96HE8 168 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 ACTR6Q9GZN1 396 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 LIPT1Q9Y234 373 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 HTR3EA5X5Y0 456 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 EDIL3O43854 480 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 TRAPPC6AO75865 159 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 PROS1P07225 676 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 ZNF3P17036 446 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 CD40LGP29965 261 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 SLAMF1Q13291 335 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 CAMK1Q14012 370 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 FAM189A2Q15884 450 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 ZNF550Q7Z398 422 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 CEP97Q8IW35 865 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.49■□□□□ 0.07
USP42-207ENST00000521713 OR4K1Q8NGD4 311 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 TMEM234Q8WY98 164 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 MRPL38Q96DV4 380 aaKnown RBP15.49■□□□□ 0.07
USP42-207ENST00000521713 ZSWIM3Q96MP5 696 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 PKP4Q99569 1192 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 TRIM36Q9NQ86 728 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 CUEDC1Q9NWM3 386 aaPredicted RBP15.49■□□□□ 0.07
USP42-207ENST00000521713 SPO11Q9Y5K1 396 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 GLOD5A6NK44 160 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 HOXA9P31269 272 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 BMP8BP34820 402 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 MAGEA12P43365 314 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 TAS2R43P59537 309 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 RASGEF1BQ0VAM2 473 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 GRIK2Q13002 908 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 PCBP2Q15366 365 aaKnown RBP eCLIP15.49■□□□□ 0.071e-8■■□□□ 14.3
USP42-207ENST00000521713 BMP8AQ7Z5Y6 402 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 GPR150Q8NGU9 434 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 LDAHQ9H6V9 325 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 AMBNQ9NP70 447 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 ZNF69Q9UC07 566 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 FTSJ1Q9UET6 329 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 TMEM5Q9Y2B1 443 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 CREG1O75629 220 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 GSTM2P28161 218 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 GJA4P35212 333 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 GNALP38405 381 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 TSPAN5P62079 268 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 ID2Q02363 134 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 FAM78AQ5JUQ0 283 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 BORAQ6PGQ7 559 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 FIGLAQ6QHK4 219 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 CHST4Q8NCG5 386 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 ACVR1CQ8NER5 493 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 BBS10Q8TAM1 723 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 ARMC5Q96C12 935 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 FXYD6-FXYD2A0A087WZ82 144 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 PDYNP01213 254 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 CDKN1CP49918 316 aaPredicted RBP15.49■□□□□ 0.07
USP42-207ENST00000521713 MADCAM1Q13477 382 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 MAPK14Q16539 360 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 VMACQ2NL98 169 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 PKDCCQ504Y2 493 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 CCDC116Q8IYX3 515 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 THRSPQ92748 146 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 MSANTD3Q96H12 275 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 FXYD6Q9H0Q3 95 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 MARCH5Q9NX47 278 aa15.49■□□□□ 0.07
USP42-207ENST00000521713 DFNA5O60443 496 aa15.48■□□□□ 0.07
USP42-207ENST00000521713 TACSTD2P09758 323 aa15.48■□□□□ 0.07
USP42-207ENST00000521713 ZNF81P51508 661 aa15.48■□□□□ 0.07
USP42-207ENST00000521713 ACY1Q03154 408 aa15.48■□□□□ 0.07
USP42-207ENST00000521713 ZNF33BQ06732 778 aa15.48■□□□□ 0.07
USP42-207ENST00000521713 FADDQ13158 208 aa15.48■□□□□ 0.07
USP42-207ENST00000521713 SYT11Q9BT88 431 aa15.48■□□□□ 0.07
USP42-207ENST00000521713 ZSCAN5BA6NJL1 495 aa15.48■□□□□ 0.07
USP42-207ENST00000521713 TFPTP0C1Z6 253 aa15.48■□□□□ 0.07
USP42-207ENST00000521713 MAP2K3P46734 347 aa15.48■□□□□ 0.07
USP42-207ENST00000521713 HNRNPFP52597 415 aaKnown RBP15.48■□□□□ 0.07
USP42-207ENST00000521713 KCNC4Q03721 635 aa15.48■□□□□ 0.07
USP42-207ENST00000521713 RHEBQ15382 184 aa15.48■□□□□ 0.07
USP42-207ENST00000521713 PIGGQ5H8A4 983 aa15.48■□□□□ 0.07
USP42-207ENST00000521713 MEDAGQ5VYS4 303 aa15.48■□□□□ 0.07
USP42-207ENST00000521713 LYSMD4Q5XG99 296 aa15.48■□□□□ 0.07
USP42-207ENST00000521713 CCBE1Q6UXH8 406 aaPredicted RBP15.48■□□□□ 0.07
USP42-207ENST00000521713 PAQR9Q6ZVX9 377 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms