RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 ALDH6A1Q02252 535 aaKnown RBP16.59■□□□□ 0.25
TRAPPC9-211ENST00000521700 GALNT1Q10472 559 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC9-211ENST00000521700 ZYG11AQ6WRX3 759 aa16.59■□□□□ 0.25
TRAPPC9-211ENST00000521700 PAGE2Q7Z2X7 111 aa16.59■□□□□ 0.25
TRAPPC9-211ENST00000521700 COMMD6Q7Z4G1 85 aa16.59■□□□□ 0.25
TRAPPC9-211ENST00000521700 SULF2Q8IWU5 870 aa16.59■□□□□ 0.25
TRAPPC9-211ENST00000521700 CPSF7Q8N684 471 aaKnown RBP16.59■□□□□ 0.25
TRAPPC9-211ENST00000521700 FAM98AQ8NCA5 519 aaKnown RBP16.59■□□□□ 0.25
TRAPPC9-211ENST00000521700 OR5L2Q8NGL0 311 aa16.59■□□□□ 0.25
TRAPPC9-211ENST00000521700 METTL6Q8TCB7 284 aa16.59■□□□□ 0.25
TRAPPC9-211ENST00000521700 RASL10BQ96S79 203 aa16.59■□□□□ 0.25
TRAPPC9-211ENST00000521700 TSPAN10Q9H1Z9 355 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC9-211ENST00000521700 GSTO2Q9H4Y5 243 aa16.59■□□□□ 0.25
TRAPPC9-211ENST00000521700 COPS7AQ9UBW8 275 aa16.59■□□□□ 0.25
TRAPPC9-211ENST00000521700 A0A1W2PS29 197 aa16.58■□□□□ 0.24
TRAPPC9-211ENST00000521700 ARHGAP10A1A4S6 786 aa16.58■□□□□ 0.24
TRAPPC9-211ENST00000521700 ZNF500O60304 480 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC9-211ENST00000521700 PLIN3O60664 434 aa16.58■□□□□ 0.24
TRAPPC9-211ENST00000521700 ZNF354AO60765 605 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC9-211ENST00000521700 CDH16O75309 829 aa16.58■□□□□ 0.24
TRAPPC9-211ENST00000521700 OR6B1O95007 311 aa16.58■□□□□ 0.24
TRAPPC9-211ENST00000521700 KRT6AP02538 564 aa16.58■□□□□ 0.24
TRAPPC9-211ENST00000521700 KRT6BP04259 564 aa16.58■□□□□ 0.24
TRAPPC9-211ENST00000521700 SLC35E2P0CK97 266 aa16.58■□□□□ 0.24
TRAPPC9-211ENST00000521700 MYL2P10916 166 aa16.58■□□□□ 0.24
TRAPPC9-211ENST00000521700 CHN1P15882 459 aa16.58■□□□□ 0.24
TRAPPC9-211ENST00000521700 SOX3P41225 446 aa16.58■□□□□ 0.24
TRAPPC9-211ENST00000521700 CCT5P48643 541 aa16.58■□□□□ 0.24
TRAPPC9-211ENST00000521700 KRT6CP48668 564 aa16.58■□□□□ 0.24
TRAPPC9-211ENST00000521700 LCP2Q13094 533 aa16.58■□□□□ 0.24
TRAPPC9-211ENST00000521700 RNFT1Q5M7Z0 435 aa16.58■□□□□ 0.24
TRAPPC9-211ENST00000521700 NDUFAF5Q5TEU4 345 aa16.58■□□□□ 0.24
TRAPPC9-211ENST00000521700 OR52E8Q6IFG1 317 aa16.58■□□□□ 0.24
TRAPPC9-211ENST00000521700 IL20RBQ6UXL0 311 aa16.58■□□□□ 0.24
TRAPPC9-211ENST00000521700 SIAH3Q8IW03 269 aa16.58■□□□□ 0.24
TRAPPC9-211ENST00000521700 OR2W6PQ8NHA6 318 aa16.58■□□□□ 0.24
TRAPPC9-211ENST00000521700 ASB15Q8WXK1 588 aa16.58■□□□□ 0.24
TRAPPC9-211ENST00000521700 CCDC126Q96EE4 140 aa16.58■□□□□ 0.24
TRAPPC9-211ENST00000521700 FBXL20Q96IG2 436 aa16.58■□□□□ 0.24
TRAPPC9-211ENST00000521700 PELOQ9BRX2 385 aaKnown RBP16.58■□□□□ 0.24
TRAPPC9-211ENST00000521700 C12orf65Q9H3J6 166 aaKnown RBP16.58■□□□□ 0.24
TRAPPC9-211ENST00000521700 NMRK1Q9NWW6 199 aa16.58■□□□□ 0.24
TRAPPC9-211ENST00000521700 GRID1Q9ULK0 1009 aa16.58■□□□□ 0.24
TRAPPC9-211ENST00000521700 ERVK-11Q9UQG0 969 aa16.58■□□□□ 0.24
TRAPPC9-211ENST00000521700 KLF13Q9Y2Y9 288 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC9-211ENST00000521700 SPTBN1Q01082 2364 aaKnown RBP16.58■□□□□ 0.24
TRAPPC9-211ENST00000521700 TLDC2A0PJX2 215 aa16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 A8MVJ9 347 aa16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 NPIPA5E9PKD4 350 aa16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 UBFD1O14562 309 aaKnown RBP16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 DYRK3O43781 588 aa16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 OR10H2O60403 315 aa16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 ULK1O75385 1050 aa16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 KRT4P19013 534 aa16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 HMOX2P30519 316 aa16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 GALNSP34059 522 aa16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 MEOX1P50221 254 aa16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 HTR6P50406 440 aa16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 MAPK12P53778 367 aa16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 PKNOX1P55347 436 aa16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 ERVK-8P63133 956 aa16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 ZNF267Q14586 743 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 SPRED3Q2MJR0 410 aa16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 CCDC153Q494R4 210 aa16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 KRTCAP3Q53RY4 240 aa16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 C1QL3Q5VWW1 255 aa16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 C9orf40Q8IXQ3 194 aa16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 GPALPP1Q8IXQ4 340 aa16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 C1orf52Q8N6N3 182 aaKnown RBP16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 CCNYL1Q8N7R7 359 aa16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 OR4K14Q8NGD5 310 aa16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 CHTF18Q8WVB6 975 aa16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 RIT1Q92963 219 aa16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 TM4SF18Q96CE8 201 aa16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 ART5Q96L15 291 aa16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 GPR137Q96N19 417 aa16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 CNPPD1Q9BV87 410 aa16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 HPF1Q9NWY4 346 aa16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 VPS29Q9UBQ0 182 aa16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 PLEKHB1Q9UF11 243 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 NPIPA1Q9UND3 350 aa16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 ERVK-19Q9WJR5 959 aa16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 STK38LQ9Y2H1 464 aa16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 TIMM22Q9Y584 194 aa16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 UTP20O75691 2785 aaKnown RBP16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 NAV2Q8IVL1 2488 aa16.57■□□□□ 0.24
TRAPPC9-211ENST00000521700 A0A1B0GUH1 482 aa16.56■□□□□ 0.24
TRAPPC9-211ENST00000521700 KLRC4-KLRK1H3BQV0 150 aa16.56■□□□□ 0.24
TRAPPC9-211ENST00000521700 COPEO14579 308 aa16.56■□□□□ 0.24
TRAPPC9-211ENST00000521700 PEX1O43933 1283 aa16.56■□□□□ 0.24
TRAPPC9-211ENST00000521700 SLU7O95391 586 aaKnown RBP16.56■□□□□ 0.24
TRAPPC9-211ENST00000521700 ESRRBO95718 433 aa16.56■□□□□ 0.24
TRAPPC9-211ENST00000521700 HSD3B1P14060 373 aa16.56■□□□□ 0.24
TRAPPC9-211ENST00000521700 HSD3B2P26439 372 aa16.56■□□□□ 0.24
TRAPPC9-211ENST00000521700 PIK3R1P27986 724 aa16.56■□□□□ 0.24
TRAPPC9-211ENST00000521700 NAGLUP54802 743 aa16.56■□□□□ 0.24
TRAPPC9-211ENST00000521700 SLC18A2Q05940 514 aa16.56■□□□□ 0.24
TRAPPC9-211ENST00000521700 CSTF3Q12996 717 aaKnown RBP16.56■□□□□ 0.24
TRAPPC9-211ENST00000521700 MPEG1Q2M385 716 aa16.56■□□□□ 0.24
TRAPPC9-211ENST00000521700 PIGGQ5H8A4 983 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms