RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 A8MU76 341 aa4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 K7EQD1 137 aa4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 INPP4BO15327 924 aa4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 TSPAN2O60636 221 aa4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 ZNF432O94892 652 aa4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 MBL2P11226 248 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 NCF1P14598 390 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 TMOD1P28289 359 aa4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 ADSSP30520 456 aa4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 PRDX2P32119 198 aa4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 NDST1P52848 882 aa4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 MTTPP55157 894 aa4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 ERVK-16P61578 105 aa4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 HSF2Q03933 536 aa4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 FUT7Q11130 342 aa4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 P2RY14Q15391 338 aa4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 HAGHQ16775 308 aa4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 CES4AQ5XG92 561 aa4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 C3P1Q6ZMU1 363 aa4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 FRRS1Q6ZNA5 592 aa4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 ASRGL1Q7L266 308 aa4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 VPS36Q86VN1 386 aa4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 OR10G7Q8NGN6 311 aa4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 TMEM37Q8WXS4 190 aa4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 MRPL24Q96A35 216 aaKnown RBP4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 NDUFAF3Q9BU61 184 aa4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 CXXC4Q9H2H0 198 aa4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 COQ10BQ9H8M1 238 aa4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 NMUR1Q9HB89 426 aa4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 TEX10Q9NXF1 929 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 NLGN3Q9NZ94 848 aa4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 ATXN10Q9UBB4 475 aa4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 MRPS18CQ9Y3D5 142 aaKnown RBP4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 PYGO1Q9Y3Y4 419 aa4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 TNFRSF18Q9Y5U5 241 aa4.53□□□□□ -1.68
HMGB1P46-201ENST00000520062 OR5H15A6NDH6 313 aa4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 MEI4A8MW99 385 aa4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 PRSS44E7EML9 344 aa4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 CHADO15335 359 aa4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 CSO75390 466 aaKnown RBP4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 TOM1L1O75674 476 aa4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 ANXA9O76027 345 aa4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 KRT8P05787 483 aa4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 IL4RP24394 825 aa4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 FCGR2BP31994 310 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 FCGR2CP31995 323 aa4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 RPL9P32969 192 aaKnown RBP4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 OPRL1P41146 370 aa4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 MATKP42679 507 aa4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 NPY2RP49146 381 aa4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 DHODHQ02127 395 aa4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 RBBP4Q09028 425 aa4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 KLF5Q13887 457 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 MTHFSDQ2M296 383 aaKnown RBP4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 SHROOM1Q2M3G4 852 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 LDLRAP1Q5SW96 308 aa4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 TRIM65Q6PJ69 517 aa4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 KIF6Q6ZMV9 814 aa4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 Q6ZRP5 223 aa4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 GOLGA7Q7Z5G4 137 aa4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 GPR142Q7Z601 462 aa4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 MISPQ8IVT2 679 aa4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 MLKLQ8NB16 471 aa4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 ZNF540Q8NDQ6 660 aa4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 SELENOMQ8WWX9 145 aa4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 TRIM44Q96DX7 344 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 COG3Q96JB2 828 aa4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 CAPNS2Q96L46 248 aa4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 ACCSQ96QU6 501 aa4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 USP28Q96RU2 1077 aa4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 THUMPD2Q9BTF0 503 aaKnown RBP4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 MIOXQ9UGB7 285 aa4.52□□□□□ -1.69
HMGB1P46-201ENST00000520062 KIF7Q2M1P5 1343 aa4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 IGHV3-20A0A0C4DH32 117 aa4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 E9PMD0 336 aa4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 SGK494L7N484 410 aa4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 LGALS8O00214 317 aa4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 PDXKO00764 312 aa4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 SH2D1BO14796 132 aa4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 IKBKBO14920 756 aa4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 VPS26AO75436 327 aa4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 NXPH4O95158 308 aa4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 NDUFA7O95182 113 aa4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 FHP07954 510 aa4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 ZCCHC18P0CG32 403 aa4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 RRASP10301 218 aa4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 PTPN6P29350 595 aa4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 MMP12P39900 470 aa4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 RPL27P61353 136 aaKnown RBP4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 BTG3Q14201 252 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 CLPPQ16740 277 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 ACSF3Q4G176 576 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 LIPKQ5VXJ0 399 aa4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 RHBDD2Q6NTF9 364 aa4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 BHLHB9Q6PI77 547 aa4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 GMCL1P1Q8NEA9 526 aa4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 ATP8B4Q8TF62 1192 aa4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 C11orf52Q96A22 123 aa4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 PINX1Q96BK5 328 aaKnown RBP4.51□□□□□ -1.69
HMGB1P46-201ENST00000520062 FBXO17Q96EF6 278 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms