RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 PTPMT1Q8WUK0 201 aaPredicted RBP17.16■□□□□ 0.34
SREK1-207ENST00000520058 RIT1Q92963 219 aa17.16■□□□□ 0.34
SREK1-207ENST00000520058 TMEM125Q96AQ2 219 aa17.16■□□□□ 0.34
SREK1-207ENST00000520058 METTL2AQ96IZ6 378 aaKnown RBP17.16■□□□□ 0.34
SREK1-207ENST00000520058 KCNK9Q9NPC2 374 aa17.16■□□□□ 0.34
SREK1-207ENST00000520058 RYDENQ9NUL5 291 aaKnown RBP17.16■□□□□ 0.34
SREK1-207ENST00000520058 TEX10Q9NXF1 929 aaPredicted RBP17.16■□□□□ 0.34
SREK1-207ENST00000520058 YARS2Q9Y2Z4 477 aaKnown RBP17.16■□□□□ 0.34
SREK1-207ENST00000520058 CSAG2Q9Y5P2 127 aa17.16■□□□□ 0.34
SREK1-207ENST00000520058 SHANK1Q9Y566 2161 aa17.16■□□□□ 0.34
SREK1-207ENST00000520058 BSNQ9UPA5 3926 aa17.16■□□□□ 0.34
SREK1-207ENST00000520058 MYOCOSA0A1B0GUC4 107 aa17.15■□□□□ 0.34
SREK1-207ENST00000520058 RGS14O43566 566 aa17.15■□□□□ 0.34
SREK1-207ENST00000520058 TYROBPO43914 113 aa17.15■□□□□ 0.34
SREK1-207ENST00000520058 PRKRAO75569 313 aaKnown RBP17.15■□□□□ 0.34
SREK1-207ENST00000520058 F10P00742 488 aa17.15■□□□□ 0.34
SREK1-207ENST00000520058 BPGMP07738 259 aa17.15■□□□□ 0.34
SREK1-207ENST00000520058 NEFHP12036 1026 aa17.15■□□□□ 0.34
SREK1-207ENST00000520058 ALDH9A1P49189 494 aa17.15■□□□□ 0.34
SREK1-207ENST00000520058 HMGCS1Q01581 520 aa17.15■□□□□ 0.34
SREK1-207ENST00000520058 TUBA3CQ13748 450 aa17.15■□□□□ 0.34
SREK1-207ENST00000520058 OR1C1Q15619 314 aa17.15■□□□□ 0.34
SREK1-207ENST00000520058 ZNF766Q5HY98 468 aa17.15■□□□□ 0.34
SREK1-207ENST00000520058 TUBA3EQ6PEY2 450 aa17.15■□□□□ 0.34
SREK1-207ENST00000520058 TRIM46Q7Z4K8 759 aa17.15■□□□□ 0.34
SREK1-207ENST00000520058 GALNT11Q8NCW6 608 aa17.15■□□□□ 0.34
SREK1-207ENST00000520058 SNRNP40Q96DI7 357 aaKnown RBP17.15■□□□□ 0.34
SREK1-207ENST00000520058 SHCBP1LQ9BZQ2 653 aa17.15■□□□□ 0.34
SREK1-207ENST00000520058 GIMAP4Q9NUV9 329 aa17.15■□□□□ 0.34
SREK1-207ENST00000520058 ARGLU1Q9NWB6 273 aaPredicted RBP17.15■□□□□ 0.34
SREK1-207ENST00000520058 LRFN1Q9P244 771 aa17.15■□□□□ 0.34
SREK1-207ENST00000520058 PCDHGB6Q9Y5F9 930 aa17.15■□□□□ 0.34
SREK1-207ENST00000520058 PCDHA9Q9Y5H5 950 aa17.15■□□□□ 0.34
SREK1-207ENST00000520058 ZNF780BQ9Y6R6 833 aa17.15■□□□□ 0.34
SREK1-207ENST00000520058 ESPL1Q14674 2120 aa17.14■□□□□ 0.33
SREK1-207ENST00000520058 RSL1D1O76021 490 aaKnown RBP17.14■□□□□ 0.33
SREK1-207ENST00000520058 RASAL1O95294 804 aa17.14■□□□□ 0.33
SREK1-207ENST00000520058 CRYABP02511 175 aaKnown RBP17.14■□□□□ 0.33
SREK1-207ENST00000520058 DRD2P14416 443 aa17.14■□□□□ 0.33
SREK1-207ENST00000520058 CSNK2A2P19784 350 aaPredicted RBP17.14■□□□□ 0.33
SREK1-207ENST00000520058 TIA1P31483 386 aaKnown RBP eCLIP17.14■□□□□ 0.333e-26■■■■■ 39.8
SREK1-207ENST00000520058 CD96P40200 585 aa17.14■□□□□ 0.33
SREK1-207ENST00000520058 HTR6P50406 440 aa17.14■□□□□ 0.33
SREK1-207ENST00000520058 SSR4P51571 173 aa17.14■□□□□ 0.33
SREK1-207ENST00000520058 GPR143P51810 404 aa17.14■□□□□ 0.33
SREK1-207ENST00000520058 XKP51811 444 aa17.14■□□□□ 0.33
SREK1-207ENST00000520058 FOXA1P55317 472 aa17.14■□□□□ 0.33
SREK1-207ENST00000520058 IGFBP7Q16270 282 aa17.14■□□□□ 0.33
SREK1-207ENST00000520058 SPRED3Q2MJR0 410 aa17.14■□□□□ 0.33
SREK1-207ENST00000520058 EXOC3L1Q86VI1 746 aa17.14■□□□□ 0.33
SREK1-207ENST00000520058 CLYBLQ8N0X4 340 aa17.14■□□□□ 0.33
SREK1-207ENST00000520058 ARMC10Q8N2F6 343 aa17.14■□□□□ 0.33
SREK1-207ENST00000520058 BCORP1Q8N888 145 aa17.14■□□□□ 0.33
SREK1-207ENST00000520058 FAM76AQ8TAV0 307 aa17.14■□□□□ 0.33
SREK1-207ENST00000520058 THAP3Q8WTV1 239 aaPredicted RBP17.14■□□□□ 0.33
SREK1-207ENST00000520058 SENP5Q96HI0 755 aaPredicted RBP17.14■□□□□ 0.33
SREK1-207ENST00000520058 FBXL20Q96IG2 436 aa17.14■□□□□ 0.33
SREK1-207ENST00000520058 CNPPD1Q9BV87 410 aa17.14■□□□□ 0.33
SREK1-207ENST00000520058 CLMPQ9H6B4 373 aa17.14■□□□□ 0.33
SREK1-207ENST00000520058 WBP11Q9Y2W2 641 aaKnown RBP17.14■□□□□ 0.33
SREK1-207ENST00000520058 FIS1Q9Y3D6 152 aa17.14■□□□□ 0.33
SREK1-207ENST00000520058 PRRC2CQ9Y520 2896 aaKnown RBP17.13■□□□□ 0.33
SREK1-207ENST00000520058 NBASA2RRP1 2371 aa17.13■□□□□ 0.33
SREK1-207ENST00000520058 GCN1Q92616 2671 aaKnown RBP17.13■□□□□ 0.33
SREK1-207ENST00000520058 PGRMC2O15173 223 aa17.13■□□□□ 0.33
SREK1-207ENST00000520058 BIRC5O15392 142 aa17.13■□□□□ 0.33
SREK1-207ENST00000520058 ITGA10O75578 1167 aa17.13■□□□□ 0.33
SREK1-207ENST00000520058 ERAL1O75616 437 aaKnown RBP17.13■□□□□ 0.33
SREK1-207ENST00000520058 SNUPNO95149 360 aaKnown RBP17.13■□□□□ 0.33
SREK1-207ENST00000520058 DDAH2O95865 285 aa17.13■□□□□ 0.33
SREK1-207ENST00000520058 ANXA4P09525 319 aaPredicted RBP17.13■□□□□ 0.33
SREK1-207ENST00000520058 PORP16435 677 aaPredicted RBP17.13■□□□□ 0.33
SREK1-207ENST00000520058 SERPINB3P29508 390 aa17.13■□□□□ 0.33
SREK1-207ENST00000520058 TRHRP34981 398 aaPredicted RBP17.13■□□□□ 0.33
SREK1-207ENST00000520058 HLCSP50747 726 aa17.13■□□□□ 0.33
SREK1-207ENST00000520058 RNF4P78317 190 aa17.13■□□□□ 0.33
SREK1-207ENST00000520058 ZNF267Q14586 743 aaPredicted RBP17.13■□□□□ 0.33
SREK1-207ENST00000520058 BEND6Q5SZJ8 279 aaPredicted RBP17.13■□□□□ 0.33
SREK1-207ENST00000520058 SLC48A1Q6P1K1 146 aa17.13■□□□□ 0.33
SREK1-207ENST00000520058 GALNT18Q6P9A2 607 aa17.13■□□□□ 0.33
SREK1-207ENST00000520058 SCIMPQ6UWF3 145 aa17.13■□□□□ 0.33
SREK1-207ENST00000520058 RNF111Q6ZNA4 994 aa17.13■□□□□ 0.33
SREK1-207ENST00000520058 SLC29A4Q7RTT9 530 aa17.13■□□□□ 0.33
SREK1-207ENST00000520058 GALNT12Q8IXK2 581 aa17.13■□□□□ 0.33
SREK1-207ENST00000520058 GPALPP1Q8IXQ4 340 aa17.13■□□□□ 0.33
SREK1-207ENST00000520058 KIRREL3Q8IZU9 778 aa17.13■□□□□ 0.33
SREK1-207ENST00000520058 DNAJB8Q8NHS0 232 aa17.13■□□□□ 0.33
SREK1-207ENST00000520058 ASB15Q8WXK1 588 aa17.13■□□□□ 0.33
SREK1-207ENST00000520058 PPWD1Q96BP3 646 aaKnown RBP17.13■□□□□ 0.33
SREK1-207ENST00000520058 TM4SF18Q96CE8 201 aa17.13■□□□□ 0.33
SREK1-207ENST00000520058 KLHL29Q96CT2 875 aa17.13■□□□□ 0.33
SREK1-207ENST00000520058 APIPQ96GX9 242 aa17.13■□□□□ 0.33
SREK1-207ENST00000520058 MECRQ9BV79 373 aa17.13■□□□□ 0.33
SREK1-207ENST00000520058 ASF1BQ9NVP2 202 aa17.13■□□□□ 0.33
SREK1-207ENST00000520058 SIRT5Q9NXA8 310 aa17.13■□□□□ 0.33
SREK1-207ENST00000520058 ANKRD10Q9NXR5 420 aa17.13■□□□□ 0.33
SREK1-207ENST00000520058 MYOTQ9UBF9 498 aa17.13■□□□□ 0.33
SREK1-207ENST00000520058 ERVK-11Q9UQG0 969 aa17.13■□□□□ 0.33
SREK1-207ENST00000520058 SVILO95425 2214 aa17.13■□□□□ 0.33
SREK1-207ENST00000520058 HELZ2Q9BYK8 2649 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 935.1 ms