RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 PANK3Q9H999 370 aa4.12□□□□□ -1.75
HMGCS1-207ENST00000514610 SLC25A19Q9HC21 320 aa4.12□□□□□ -1.75
HMGCS1-207ENST00000514610 GTSE1Q9NYZ3 720 aa4.12□□□□□ -1.75
HMGCS1-207ENST00000514610 FETUBQ9UGM5 382 aa4.12□□□□□ -1.75
HMGCS1-207ENST00000514610 KNSTRNQ9Y448 316 aa4.12□□□□□ -1.75
HMGCS1-207ENST00000514610 STYXL1Q9Y6J8 313 aa4.12□□□□□ -1.75
HMGCS1-207ENST00000514610 FGD5Q6ZNL6 1462 aa4.11□□□□□ -1.75
HMGCS1-207ENST00000514610 YJEFN3A6XGL0 299 aa4.11□□□□□ -1.75
HMGCS1-207ENST00000514610 ATP6V1G1O75348 118 aa4.11□□□□□ -1.75
HMGCS1-207ENST00000514610 PRDM1O75626 825 aa4.11□□□□□ -1.75
HMGCS1-207ENST00000514610 BCAS2O75934 225 aaPredicted RBP4.11□□□□□ -1.75
HMGCS1-207ENST00000514610 SEMA4FO95754 770 aa4.11□□□□□ -1.75
HMGCS1-207ENST00000514610 HPRP00739 348 aa4.11□□□□□ -1.75
HMGCS1-207ENST00000514610 IGHV3-13P01766 116 aa4.11□□□□□ -1.75
HMGCS1-207ENST00000514610 IGHG3P01860 377 aa4.11□□□□□ -1.75
HMGCS1-207ENST00000514610 MT-ND3P03897 115 aa4.11□□□□□ -1.75
HMGCS1-207ENST00000514610 SFTPBP07988 381 aa4.11□□□□□ -1.75
HMGCS1-207ENST00000514610 HCKP08631 526 aa4.11□□□□□ -1.75
HMGCS1-207ENST00000514610 FCARP24071 287 aa4.11□□□□□ -1.75
HMGCS1-207ENST00000514610 LMO2P25791 158 aa4.11□□□□□ -1.75
HMGCS1-207ENST00000514610 SHC1P29353 583 aa4.11□□□□□ -1.75
HMGCS1-207ENST00000514610 NSFP46459 744 aaKnown RBP4.11□□□□□ -1.75
HMGCS1-207ENST00000514610 NT5C2P49902 561 aa4.11□□□□□ -1.75
HMGCS1-207ENST00000514610 FCHO2Q0JRZ9 810 aa4.11□□□□□ -1.75
HMGCS1-207ENST00000514610 COX10Q12887 443 aa4.11□□□□□ -1.75
HMGCS1-207ENST00000514610 FASTKQ14296 549 aaKnown RBP4.11□□□□□ -1.75
HMGCS1-207ENST00000514610 MPPE1Q53F39 396 aa4.11□□□□□ -1.75
HMGCS1-207ENST00000514610 ZNF841Q6ZN19 808 aa4.11□□□□□ -1.75
HMGCS1-207ENST00000514610 RABEPKQ7Z6M1 372 aa4.11□□□□□ -1.75
HMGCS1-207ENST00000514610 OR52E1Q8NGJ3 308 aa4.11□□□□□ -1.75
HMGCS1-207ENST00000514610 OR4F5Q8NH21 305 aa4.11□□□□□ -1.75
HMGCS1-207ENST00000514610 RAB39BQ96DA2 213 aa4.11□□□□□ -1.75
HMGCS1-207ENST00000514610 EEF2KMTQ96G04 330 aa4.11□□□□□ -1.75
HMGCS1-207ENST00000514610 CDHR1Q96JP9 859 aa4.11□□□□□ -1.75
HMGCS1-207ENST00000514610 RUNDC3BQ96NL0 473 aa4.11□□□□□ -1.75
HMGCS1-207ENST00000514610 ADNPQ9H2P0 1102 aa4.11□□□□□ -1.75
HMGCS1-207ENST00000514610 THAP9Q9H5L6 903 aa4.11□□□□□ -1.75
HMGCS1-207ENST00000514610 DBNDD1Q9H9R9 158 aa4.11□□□□□ -1.75
HMGCS1-207ENST00000514610 NARFQ9UHQ1 456 aa4.11□□□□□ -1.75
HMGCS1-207ENST00000514610 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.11□□□□□ -1.75
HMGCS1-207ENST00000514610 IGHV3-16A0A0C4DH30 117 aa4.1□□□□□ -1.75
HMGCS1-207ENST00000514610 MACROD2A1Z1Q3 448 aa4.1□□□□□ -1.75
HMGCS1-207ENST00000514610 RPL37AP8A6NKH3 93 aa4.1□□□□□ -1.75
HMGCS1-207ENST00000514610 SRRM5B3KS81 715 aa4.1□□□□□ -1.75
HMGCS1-207ENST00000514610 LRP3O75074 770 aa4.1□□□□□ -1.75
HMGCS1-207ENST00000514610 DUSP11O75319 330 aaKnown RBP4.1□□□□□ -1.75
HMGCS1-207ENST00000514610 REC8O95072 547 aa4.1□□□□□ -1.75
HMGCS1-207ENST00000514610 HOXD4P09016 255 aaPredicted RBP4.1□□□□□ -1.75
HMGCS1-207ENST00000514610 OR9G9P0C7N8 305 aa4.1□□□□□ -1.75
HMGCS1-207ENST00000514610 IL4RP24394 825 aa4.1□□□□□ -1.75
HMGCS1-207ENST00000514610 SLC1A4P43007 532 aa4.1□□□□□ -1.75
HMGCS1-207ENST00000514610 TNFRSF4P43489 277 aa4.1□□□□□ -1.75
HMGCS1-207ENST00000514610 SLC1A6P48664 564 aa4.1□□□□□ -1.75
HMGCS1-207ENST00000514610 SRP54P61011 504 aaKnown RBP4.1□□□□□ -1.75
HMGCS1-207ENST00000514610 EXOSC7Q15024 291 aaKnown RBP4.1□□□□□ -1.75
HMGCS1-207ENST00000514610 C9orf66Q5T8R8 295 aa4.1□□□□□ -1.75
HMGCS1-207ENST00000514610 NKAIN2Q5VXU1 208 aa4.1□□□□□ -1.75
HMGCS1-207ENST00000514610 WDR25Q64LD2 544 aaPredicted RBP4.1□□□□□ -1.75
HMGCS1-207ENST00000514610 ETFRF1Q6IPR1 90 aa4.1□□□□□ -1.75
HMGCS1-207ENST00000514610 DLEU7Q6UYE1 221 aa4.1□□□□□ -1.75
HMGCS1-207ENST00000514610 CATSPER3Q86XQ3 398 aa4.1□□□□□ -1.75
HMGCS1-207ENST00000514610 CCDC71Q8IV32 467 aaPredicted RBP4.1□□□□□ -1.75
HMGCS1-207ENST00000514610 ZNF781Q8N8C0 355 aa4.1□□□□□ -1.75
HMGCS1-207ENST00000514610 OR1K1Q8NGR3 316 aa4.1□□□□□ -1.75
HMGCS1-207ENST00000514610 URGCPQ8TCY9 931 aa4.1□□□□□ -1.75
HMGCS1-207ENST00000514610 COG3Q96JB2 828 aa4.1□□□□□ -1.75
HMGCS1-207ENST00000514610 RPGRIP1Q96KN7 1286 aa4.1□□□□□ -1.75
HMGCS1-207ENST00000514610 DCTN5Q9BTE1 182 aa4.1□□□□□ -1.75
HMGCS1-207ENST00000514610 TRIM6Q9C030 488 aaPredicted RBP4.1□□□□□ -1.75
HMGCS1-207ENST00000514610 ABCG4Q9H172 646 aa4.1□□□□□ -1.75
HMGCS1-207ENST00000514610 NT5DC2Q9H857 520 aa4.1□□□□□ -1.75
HMGCS1-207ENST00000514610 ZNF446Q9NWS9 450 aa4.1□□□□□ -1.75
HMGCS1-207ENST00000514610 NDUFA13Q9P0J0 144 aa4.1□□□□□ -1.75
HMGCS1-207ENST00000514610 SPATA2Q9UM82 520 aa4.1□□□□□ -1.75
HMGCS1-207ENST00000514610 KIF7Q2M1P5 1343 aa4.1□□□□□ -1.75
HMGCS1-207ENST00000514610 NPC1L1Q9UHC9 1359 aa4.1□□□□□ -1.75
HMGCS1-207ENST00000514610 A0A0U1RQG5 324 aaPredicted RBP4.09□□□□□ -1.75
HMGCS1-207ENST00000514610 ACOD1A6NK06 481 aa4.09□□□□□ -1.75
HMGCS1-207ENST00000514610 TXNL1O43396 289 aa4.09□□□□□ -1.75
HMGCS1-207ENST00000514610 ZBTB14O43829 449 aa4.09□□□□□ -1.75
HMGCS1-207ENST00000514610 SERPINF2P08697 491 aa4.09□□□□□ -1.75
HMGCS1-207ENST00000514610 CCDC159P0C7I6 412 aa4.09□□□□□ -1.75
HMGCS1-207ENST00000514610 FOSL2P15408 326 aa4.09□□□□□ -1.75
HMGCS1-207ENST00000514610 GATA1P15976 413 aaPredicted RBP4.09□□□□□ -1.75
HMGCS1-207ENST00000514610 GATA2P23769 480 aaPredicted RBP4.09□□□□□ -1.75
HMGCS1-207ENST00000514610 HNRNPFP52597 415 aaKnown RBP4.09□□□□□ -1.75
HMGCS1-207ENST00000514610 RIDAP52758 137 aaKnown RBP4.09□□□□□ -1.75
HMGCS1-207ENST00000514610 ACY1Q03154 408 aa4.09□□□□□ -1.75
HMGCS1-207ENST00000514610 TSTA3Q13630 321 aaPredicted RBP4.09□□□□□ -1.75
HMGCS1-207ENST00000514610 GPAT3Q53EU6 434 aa4.09□□□□□ -1.75
HMGCS1-207ENST00000514610 FAM182AQ5T1J6 154 aa4.09□□□□□ -1.75
HMGCS1-207ENST00000514610 C1orf189Q5VU69 101 aa4.09□□□□□ -1.75
HMGCS1-207ENST00000514610 RTL6Q6ICC9 239 aa4.09□□□□□ -1.75
HMGCS1-207ENST00000514610 CDC42EP5Q6NZY7 148 aa4.09□□□□□ -1.75
HMGCS1-207ENST00000514610 FBXL22Q6P050 247 aa4.09□□□□□ -1.75
HMGCS1-207ENST00000514610 ADAMTSL2Q86TH1 951 aa4.09□□□□□ -1.75
HMGCS1-207ENST00000514610 C4orf32Q8N8J7 132 aa4.09□□□□□ -1.75
HMGCS1-207ENST00000514610 TMEM185AQ8NFB2 350 aa4.09□□□□□ -1.75
HMGCS1-207ENST00000514610 NEK11Q8NG66 645 aa4.09□□□□□ -1.75
HMGCS1-207ENST00000514610 OR4Q3Q8NH05 313 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms