RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 FEN1P39748 380 aaKnown RBP9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 ST13P50502 369 aaKnown RBP9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 PGDP52209 483 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 HSD17B7P56937 341 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 ACTN3Q08043 901 aaPredicted RBP9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 Q0VFX4 171 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 LTB4RQ15722 352 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 TBR1Q16650 682 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 ZNF385BQ569K4 471 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 DCAF10Q5QP82 559 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 FAM71E1Q6IPT2 247 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 CGB2Q6NT52 195 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 SLC48A1Q6P1K1 146 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 GPR155Q7Z3F1 870 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 TICAM1Q8IUC6 712 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 LRRC34Q8IZ02 419 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 TMEM132CQ8N3T6 1108 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 KIF2BQ8N4N8 673 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 KRTCAP2Q8N6L1 136 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 ZNF321PQ8N8H1 164 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 DNAJB14Q8TBM8 379 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 THAP4Q8WY91 577 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 CNRIP1Q96F85 164 aaPredicted RBP9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 CCT7Q99832 543 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 FAIM2Q9BWQ8 316 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 ALOXE3Q9BYJ1 711 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 ZNF700Q9H0M5 742 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 NPHS2Q9NP85 383 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 MYNNQ9NPC7 610 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 PFDN4Q9NQP4 134 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 SIRT5Q9NXA8 310 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 MS4A12Q9NXJ0 267 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 C19orf25Q9UFG5 118 aaPredicted RBP9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 UTS2RQ9UKP6 389 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 KCNMB2Q9Y691 235 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 BOD1L1Q8NFC6 3051 aa9.17□□□□□ -0.94
TOPBP1-209ENST00000513818 MED13Q9UHV7 2174 aa9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 hCG_2014768A0A024R1R8 64 aa9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 SAGE2PA6NJ88 616 aa9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 TRPC5OSA6NMA1 111 aa9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 E9PBE3 544 aa9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 SLCO1B7G3V0H7 640 aa9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 OR10H2O60403 315 aa9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 KLHL41O60662 606 aa9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 GPR75O95800 540 aa9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 HPP00738 406 aa9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 FAM87AP0C7U9 286 aa9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 ALOX15P16050 662 aaPredicted RBP9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 LBPP18428 481 aa9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 PIK3R1P27986 724 aa9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 IDH3AP50213 366 aa9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 CCL11P51671 97 aa9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 AQP5P55064 265 aa9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 SLC26A5P58743 744 aa9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 TRA2BP62995 288 aaKnown RBP9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 ERVK-8P63133 956 aa9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 BTBD16Q32M84 506 aa9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 FCRLBQ6BAA4 426 aa9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 BORAQ6PGQ7 559 aa9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 LARP4Q71RC2 724 aaKnown RBP eCLIP9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 KIRREL3Q8IZU9 778 aa9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 SIRT6Q8N6T7 355 aa9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 ADCY4Q8NFM4 1077 aa9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 CIDECQ96AQ7 238 aaPredicted RBP9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 DGAT2Q96PD7 388 aa9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 LPAR4Q99677 370 aa9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 CNPPD1Q9BV87 410 aa9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 ING2Q9H160 280 aa9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 RABEP2Q9H5N1 569 aa9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 ADAP2Q9NPF8 381 aa9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 MIEF1Q9NQG6 463 aa9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 VTI1BQ9UEU0 232 aa9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 CES1P1Q9UKY3 287 aa9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 EIF3LQ9Y262 564 aaKnown RBP9.16□□□□□ -0.94
TOPBP1-209ENST00000513818 TNRC6AQ8NDV7 1962 aaKnown RBP9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 A0A1W2PQ72 361 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 C17orf105B2RV13 164 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 K7EM74 188 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 SCAMP2O15127 329 aaKnown RBP9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 GUCY1B2O75343 617 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 NME6O75414 186 aaPredicted RBP9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 FBXO45P0C2W1 286 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 CT62P0C5K7 136 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 ITGAMP11215 1152 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 CPMP14384 443 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 TNNI3P19429 210 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 DDCP20711 480 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 NT5EP21589 574 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 ITGA3P26006 1051 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 STT3AP46977 705 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 XKP51811 444 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 POLE2P56282 527 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 IGLV3-21P80748 117 aaPredicted RBP9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 PLIN5Q00G26 463 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 GUCA2AQ02747 115 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 EMX2Q04743 252 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 HEPACAMQ14CZ8 416 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 MPEG1Q2M385 716 aa9.15□□□□□ -0.94
TOPBP1-209ENST00000513818 LSM12Q3MHD2 195 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms