RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 SGTBQ96EQ0 304 aa10.78□□□□□ -0.68
TCOF1-211ENST00000513346 ZNF514Q96K75 400 aaPredicted RBP10.78□□□□□ -0.68
TCOF1-211ENST00000513346 R3HDMLQ9H3Y0 253 aa10.78□□□□□ -0.68
TCOF1-211ENST00000513346 CNOT2Q9NZN8 540 aaKnown RBP10.78□□□□□ -0.68
TCOF1-211ENST00000513346 IKZF2Q9UKS7 526 aa10.78□□□□□ -0.68
TCOF1-211ENST00000513346 ACSL5Q9ULC5 683 aa10.78□□□□□ -0.68
TCOF1-211ENST00000513346 ANKRD66B4E2M5 251 aa10.77□□□□□ -0.68
TCOF1-211ENST00000513346 ATP6V1G2-DDX39BF2Z307 99 aa10.77□□□□□ -0.68
TCOF1-211ENST00000513346 RHCEP18577 417 aa10.77□□□□□ -0.68
TCOF1-211ENST00000513346 ARFIP1P53367 373 aa10.77□□□□□ -0.68
TCOF1-211ENST00000513346 RAB5BP61020 215 aa10.77□□□□□ -0.68
TCOF1-211ENST00000513346 ADAM8P78325 824 aa10.77□□□□□ -0.68
TCOF1-211ENST00000513346 SERINC3Q13530 473 aa10.77□□□□□ -0.68
TCOF1-211ENST00000513346 PTGES3Q15185 160 aaKnown RBP10.77□□□□□ -0.68
TCOF1-211ENST00000513346 PXDC1Q5TGL8 231 aa10.77□□□□□ -0.68
TCOF1-211ENST00000513346 GTF2IRD2BQ6EKJ0 949 aa10.77□□□□□ -0.68
TCOF1-211ENST00000513346 MSANTD1Q6ZTZ1 278 aa10.77□□□□□ -0.68
TCOF1-211ENST00000513346 Q6ZVU0 165 aa10.77□□□□□ -0.68
TCOF1-211ENST00000513346 C14orf80Q86SX3 495 aa10.77□□□□□ -0.68
TCOF1-211ENST00000513346 GTF2IRD2Q86UP8 949 aa10.77□□□□□ -0.68
TCOF1-211ENST00000513346 LHFPL3Q86UP9 236 aa10.77□□□□□ -0.68
TCOF1-211ENST00000513346 PAQR7Q86WK9 346 aa10.77□□□□□ -0.68
TCOF1-211ENST00000513346 STOML3Q8TAV4 291 aa10.77□□□□□ -0.68
TCOF1-211ENST00000513346 DYNC2LI1Q8TCX1 351 aa10.77□□□□□ -0.68
TCOF1-211ENST00000513346 ARPC5LQ9BPX5 153 aa10.77□□□□□ -0.68
TCOF1-211ENST00000513346 HDHD5Q9BXW7 423 aa10.77□□□□□ -0.68
TCOF1-211ENST00000513346 ZNF436Q9C0F3 470 aaPredicted RBP10.77□□□□□ -0.68
TCOF1-211ENST00000513346 HEBP1Q9NRV9 189 aa10.77□□□□□ -0.68
TCOF1-211ENST00000513346 CDH10Q9Y6N8 788 aa10.77□□□□□ -0.68
TCOF1-211ENST00000513346 MYADML2A6NDP7 307 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 FAM170BA6NMN3 283 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 WASHC1A8K0Z3 465 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 INPPL1O15357 1258 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 RPS17P08708 135 aaKnown RBP10.77□□□□□ -0.69
TCOF1-211ENST00000513346 ALPIP09923 528 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 CBSLP0DN79 551 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 EPCAMP16422 314 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 CHMP24386 653 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 CBSP35520 551 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 PIGAP37287 484 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 SOX3P41225 446 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 NRIP1P48552 1158 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 ISL1P61371 349 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 UAP1L1Q3KQV9 507 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 MS4A13Q5J8X5 152 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 EIF5AL1Q6IS14 154 aaKnown RBP10.77□□□□□ -0.69
TCOF1-211ENST00000513346 AMZ2Q86W34 360 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 CLDN19Q8N6F1 224 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 DTX3Q8N9I9 347 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 OR5J2Q8NH18 312 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 THAP6Q8TBB0 222 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 CYB5D2Q8WUJ1 264 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 ZNF471Q9BX82 626 aaPredicted RBP10.77□□□□□ -0.69
TCOF1-211ENST00000513346 DNMT3AQ9Y6K1 912 aaPredicted RBP10.77□□□□□ -0.69
TCOF1-211ENST00000513346 HOXC11O43248 304 aaPredicted RBP10.77□□□□□ -0.69
TCOF1-211ENST00000513346 PDYNP01213 254 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 HTR2AP28223 471 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 TAS2R43P59537 309 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 FAM76BQ5HYJ3 339 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 COMMD2Q86X83 199 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 CHFRQ96EP1 664 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 MCOLN1Q9GZU1 580 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 TRPV4Q9HBA0 871 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 P2RX2Q9UBL9 471 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 LOC102723532A0A0G2JNH3 316 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 SLC35F4A4IF30 521 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 ANKRD28O15084 1053 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 PRAMEF12O95522 483 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 AKT2P31751 481 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 KHKP50053 298 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 ETV1P50549 477 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 AQP6Q13520 282 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 TEAD2Q15562 447 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 MICAQ29983 383 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 CPZQ66K79 652 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 GPRIN1Q7Z2K8 1008 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 NATD1Q8N6N6 113 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 FAM110BQ8TC76 370 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 SLC35B4Q969S0 331 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 LMLNQ96KR4 655 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 LRR1Q96L50 414 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 CENPOQ9BU64 300 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 TMEM27Q9HBJ8 222 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 POLHQ9Y253 713 aa10.77□□□□□ -0.69
TCOF1-211ENST00000513346 C2orf92A0A1B0GVN3 265 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 FLRT2O43155 660 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 OR1F1O43749 312 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 OR1I1O60431 355 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 CREBL2O60519 120 aaPredicted RBP10.76□□□□□ -0.69
TCOF1-211ENST00000513346 C6orf47O95873 294 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 IL1AP01583 271 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 TGM1P22735 817 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 GABRB3P28472 473 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 AVPR1BP47901 424 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 RRAS2P62070 204 aaPredicted RBP10.76□□□□□ -0.69
TCOF1-211ENST00000513346 PRPF38BQ5VTL8 546 aaKnown RBP10.76□□□□□ -0.69
TCOF1-211ENST00000513346 SLC22A10Q63ZE4 541 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 LETMD1Q6P1Q0 360 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 BRAT1Q6PJG6 821 aa10.76□□□□□ -0.69
TCOF1-211ENST00000513346 IDO2Q6ZQW0 420 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms