RNA–Protein interactions for RNA: ENST00000512985.1

CDK7-209, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 261 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-209ENST00000512985 TRPC5OSA6NMA1 111 aa11.93□□□□□ -0.5
CDK7-209ENST00000512985 A8MUI8 341 aa11.93□□□□□ -0.5
CDK7-209ENST00000512985 SKAP2O75563 359 aaPredicted RBP11.93□□□□□ -0.5
CDK7-209ENST00000512985 ERAL1O75616 437 aaKnown RBP11.93□□□□□ -0.5
CDK7-209ENST00000512985 ZFAND5O76080 213 aa11.93□□□□□ -0.5
CDK7-209ENST00000512985 IL3P08700 152 aa11.93□□□□□ -0.5
CDK7-209ENST00000512985 ITGAMP11215 1152 aa11.93□□□□□ -0.5
CDK7-209ENST00000512985 PORP16435 677 aaPredicted RBP11.93□□□□□ -0.5
CDK7-209ENST00000512985 XKP51811 444 aa11.93□□□□□ -0.5
CDK7-209ENST00000512985 RPL38P63173 70 aaKnown RBP11.93□□□□□ -0.5
CDK7-209ENST00000512985 C19orf57Q0VDD7 668 aa11.93□□□□□ -0.5
CDK7-209ENST00000512985 Q0VFX4 171 aa11.93□□□□□ -0.5
CDK7-209ENST00000512985 NFATC3Q12968 1075 aa11.93□□□□□ -0.5
CDK7-209ENST00000512985 SMU1Q2TAY7 513 aa11.93□□□□□ -0.5
CDK7-209ENST00000512985 UGT3A2Q3SY77 523 aa11.93□□□□□ -0.5
CDK7-209ENST00000512985 GALNTL6Q49A17 601 aa11.93□□□□□ -0.5
CDK7-209ENST00000512985 SOWAHCQ53LP3 525 aaPredicted RBP11.93□□□□□ -0.5
CDK7-209ENST00000512985 TTMPQ5BVD1 217 aa11.93□□□□□ -0.5
CDK7-209ENST00000512985 HSDL2Q6YN16 418 aa11.93□□□□□ -0.5
CDK7-209ENST00000512985 LRRC34Q8IZ02 419 aa11.93□□□□□ -0.5
CDK7-209ENST00000512985 ARFGAP2Q8N6H7 521 aa11.93□□□□□ -0.5
CDK7-209ENST00000512985 HORMAD2Q8N7B1 307 aa11.93□□□□□ -0.5
CDK7-209ENST00000512985 ZNF781Q8N8C0 355 aa11.93□□□□□ -0.5
CDK7-209ENST00000512985 OR1N1Q8NGS0 311 aa11.93□□□□□ -0.5
CDK7-209ENST00000512985 CDC26Q8NHZ8 85 aa11.93□□□□□ -0.5
CDK7-209ENST00000512985 ELP5Q8TE02 316 aa11.93□□□□□ -0.5
CDK7-209ENST00000512985 C16orf78Q8WTQ4 265 aa11.93□□□□□ -0.5
CDK7-209ENST00000512985 RIT1Q92963 219 aa11.93□□□□□ -0.5
CDK7-209ENST00000512985 TUBGCP3Q96CW5 907 aa11.93□□□□□ -0.5
CDK7-209ENST00000512985 C11orf24Q96F05 449 aaPredicted RBP11.93□□□□□ -0.5
CDK7-209ENST00000512985 EBPLQ9BY08 206 aa11.93□□□□□ -0.5
CDK7-209ENST00000512985 OR8D2Q9GZM6 311 aa11.93□□□□□ -0.5
CDK7-209ENST00000512985 MYNNQ9NPC7 610 aa11.93□□□□□ -0.5
CDK7-209ENST00000512985 MED4Q9NPJ6 270 aa11.93□□□□□ -0.5
CDK7-209ENST00000512985 INTS9Q9NV88 658 aaKnown RBP11.93□□□□□ -0.5
CDK7-209ENST00000512985 HAO1Q9UJM8 370 aa11.93□□□□□ -0.5
CDK7-209ENST00000512985 UTS2RQ9UKP6 389 aa11.93□□□□□ -0.5
CDK7-209ENST00000512985 PPIEQ9UNP9 301 aaKnown RBP11.93□□□□□ -0.5
CDK7-209ENST00000512985 EIF3LQ9Y262 564 aaKnown RBP11.93□□□□□ -0.5
CDK7-209ENST00000512985 TMEM233B4DJY2 109 aa11.92□□□□□ -0.5
CDK7-209ENST00000512985 LSM1O15116 133 aaKnown RBP11.92□□□□□ -0.5
CDK7-209ENST00000512985 PGRMC2O15173 223 aa11.92□□□□□ -0.5
CDK7-209ENST00000512985 ITM2AO43736 263 aa11.92□□□□□ -0.5
CDK7-209ENST00000512985 LYPLA1O75608 230 aaPredicted RBP11.92□□□□□ -0.5
CDK7-209ENST00000512985 PRPS2P11908 318 aa11.92□□□□□ -0.5
CDK7-209ENST00000512985 DDCP20711 480 aa11.92□□□□□ -0.5
CDK7-209ENST00000512985 NTSP30990 170 aa11.92□□□□□ -0.5
CDK7-209ENST00000512985 MPIP34949 423 aa11.92□□□□□ -0.5
CDK7-209ENST00000512985 RAE1P78406 368 aaKnown RBP11.92□□□□□ -0.5
CDK7-209ENST00000512985 ARG2P78540 354 aa11.92□□□□□ -0.5
CDK7-209ENST00000512985 ID2Q02363 134 aa11.92□□□□□ -0.5
CDK7-209ENST00000512985 C2orf80Q0P641 193 aa11.92□□□□□ -0.5
CDK7-209ENST00000512985 PDCD2Q16342 344 aaPredicted RBP11.92□□□□□ -0.5
CDK7-209ENST00000512985 SPRED3Q2MJR0 410 aa11.92□□□□□ -0.5
CDK7-209ENST00000512985 XKR7Q5GH72 579 aa11.92□□□□□ -0.5
CDK7-209ENST00000512985 H3F3CQ6NXT2 135 aa11.92□□□□□ -0.5
CDK7-209ENST00000512985 Q6ZSR9 355 aa11.92□□□□□ -0.5
CDK7-209ENST00000512985 R3HCC1LQ7Z5L2 792 aaKnown RBP11.92□□□□□ -0.5
CDK7-209ENST00000512985 CRLF3Q8IUI8 442 aa11.92□□□□□ -0.5
CDK7-209ENST00000512985 OR4N5Q8IXE1 308 aa11.92□□□□□ -0.5
CDK7-209ENST00000512985 GALNT12Q8IXK2 581 aa11.92□□□□□ -0.5
CDK7-209ENST00000512985 SHISA5Q8N114 240 aa11.92□□□□□ -0.5
CDK7-209ENST00000512985 LRRC25Q8N386 305 aaPredicted RBP11.92□□□□□ -0.5
CDK7-209ENST00000512985 SIRT6Q8N6T7 355 aa11.92□□□□□ -0.5
CDK7-209ENST00000512985 FNDC5Q8NAU1 212 aa11.92□□□□□ -0.5
CDK7-209ENST00000512985 OR8K3Q8NH51 312 aa11.92□□□□□ -0.5
CDK7-209ENST00000512985 SLC2A12Q8TD20 617 aa11.92□□□□□ -0.5
CDK7-209ENST00000512985 NCLNQ969V3 563 aa11.92□□□□□ -0.5
CDK7-209ENST00000512985 PRPF18Q99633 342 aaKnown RBP11.92□□□□□ -0.5
CDK7-209ENST00000512985 MESP1Q9BRJ9 268 aa11.92□□□□□ -0.5
CDK7-209ENST00000512985 RNF32Q9H0A6 362 aa11.92□□□□□ -0.5
CDK7-209ENST00000512985 TUBB1Q9H4B7 451 aa11.92□□□□□ -0.5
CDK7-209ENST00000512985 STMN3Q9NZ72 180 aa11.92□□□□□ -0.5
CDK7-209ENST00000512985 CFL2Q9Y281 166 aa11.92□□□□□ -0.5
CDK7-209ENST00000512985 CCL27Q9Y4X3 112 aa11.92□□□□□ -0.5
CDK7-209ENST00000512985 POLR3HQ9Y535 204 aaPredicted RBP11.92□□□□□ -0.5
CDK7-209ENST00000512985 TRBV11-1A0A0K0K1C0 115 aa11.91□□□□□ -0.5
CDK7-209ENST00000512985 OR6C76A6NM76 312 aa11.91□□□□□ -0.5
CDK7-209ENST00000512985 HDAC3O15379 428 aa11.91□□□□□ -0.5
CDK7-209ENST00000512985 PEX11AO75192 247 aa11.91□□□□□ -0.5
CDK7-209ENST00000512985 SNNO75324 88 aaPredicted RBP11.91□□□□□ -0.5
CDK7-209ENST00000512985 PRKRAO75569 313 aaKnown RBP11.91□□□□□ -0.5
CDK7-209ENST00000512985 BCAS2O75934 225 aaPredicted RBP11.91□□□□□ -0.5
CDK7-209ENST00000512985 SASH3O75995 380 aa11.91□□□□□ -0.5
CDK7-209ENST00000512985 SLITRK5O94991 958 aa11.91□□□□□ -0.5
CDK7-209ENST00000512985 ATP1B1P05026 303 aa11.91□□□□□ -0.5
CDK7-209ENST00000512985 CPMP14384 443 aa11.91□□□□□ -0.5
CDK7-209ENST00000512985 NR1D1P20393 614 aa11.91□□□□□ -0.5
CDK7-209ENST00000512985 NT5EP21589 574 aa11.91□□□□□ -0.5
CDK7-209ENST00000512985 SOX11P35716 441 aa11.91□□□□□ -0.5
CDK7-209ENST00000512985 HPCAL1P37235 193 aa11.91□□□□□ -0.5
CDK7-209ENST00000512985 KIAA0040Q15053 153 aa11.91□□□□□ -0.5
CDK7-209ENST00000512985 TLR1Q15399 786 aa11.91□□□□□ -0.5
CDK7-209ENST00000512985 ACER2Q5QJU3 275 aa11.91□□□□□ -0.5
CDK7-209ENST00000512985 IGFL2Q6UWQ7 119 aa11.91□□□□□ -0.5
CDK7-209ENST00000512985 LINC00696Q6ZRV3 163 aa11.91□□□□□ -0.5
CDK7-209ENST00000512985 SLC29A4Q7RTT9 530 aa11.91□□□□□ -0.5
CDK7-209ENST00000512985 RPS19BP1Q86WX3 136 aaKnown RBP11.91□□□□□ -0.5
CDK7-209ENST00000512985 NATD1Q8N6N6 113 aa11.91□□□□□ -0.5
CDK7-209ENST00000512985 NFAM1Q8NET5 270 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms