RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 PRKAA2P54646 552 aa12.33□□□□□ -0.44
RNF4-215ENST00000511843 ERVK-8P63133 956 aa12.33□□□□□ -0.44
RNF4-215ENST00000511843 RNF4P78317 190 aa12.33□□□□□ -0.44
RNF4-215ENST00000511843 HSF1Q00613 529 aa12.33□□□□□ -0.44
RNF4-215ENST00000511843 PLIN5Q00G26 463 aa12.33□□□□□ -0.44
RNF4-215ENST00000511843 ALDH6A1Q02252 535 aaKnown RBP12.33□□□□□ -0.44
RNF4-215ENST00000511843 SCIMPQ6UWF3 145 aa12.33□□□□□ -0.44
RNF4-215ENST00000511843 SH2D5Q6ZV89 423 aa12.33□□□□□ -0.44
RNF4-215ENST00000511843 GPRIN3Q6ZVF9 776 aa12.33□□□□□ -0.44
RNF4-215ENST00000511843 COMMD6Q7Z4G1 85 aa12.33□□□□□ -0.44
RNF4-215ENST00000511843 LCA5Q86VQ0 697 aa12.33□□□□□ -0.44
RNF4-215ENST00000511843 FJX1Q86VR8 437 aa12.33□□□□□ -0.44
RNF4-215ENST00000511843 SULF2Q8IWU5 870 aa12.33□□□□□ -0.44
RNF4-215ENST00000511843 C9orf40Q8IXQ3 194 aa12.33□□□□□ -0.44
RNF4-215ENST00000511843 C4orf33Q8N1A6 199 aa12.33□□□□□ -0.44
RNF4-215ENST00000511843 METTL4Q8N3J2 472 aa12.33□□□□□ -0.44
RNF4-215ENST00000511843 CCNYL1Q8N7R7 359 aa12.33□□□□□ -0.44
RNF4-215ENST00000511843 TMEM125Q96AQ2 219 aa12.33□□□□□ -0.44
RNF4-215ENST00000511843 RASL10BQ96S79 203 aa12.33□□□□□ -0.44
RNF4-215ENST00000511843 CNPPD1Q9BV87 410 aa12.33□□□□□ -0.44
RNF4-215ENST00000511843 MYOTQ9UBF9 498 aa12.33□□□□□ -0.44
RNF4-215ENST00000511843 PPT2Q9UMR5 302 aa12.33□□□□□ -0.44
RNF4-215ENST00000511843 SNX6Q9UNH7 406 aa12.33□□□□□ -0.44
RNF4-215ENST00000511843 ERVK-11Q9UQG0 969 aa12.33□□□□□ -0.44
RNF4-215ENST00000511843 ERVK-19Q9WJR5 959 aa12.33□□□□□ -0.44
RNF4-215ENST00000511843 YARS2Q9Y2Z4 477 aaKnown RBP12.33□□□□□ -0.44
RNF4-215ENST00000511843 TIMM22Q9Y584 194 aa12.33□□□□□ -0.44
RNF4-215ENST00000511843 NINQ8N4C6 2090 aa12.33□□□□□ -0.44
RNF4-215ENST00000511843 TRGV8A0A0C4DH27 118 aa12.32□□□□□ -0.44
RNF4-215ENST00000511843 TLDC2A0PJX2 215 aa12.32□□□□□ -0.44
RNF4-215ENST00000511843 A8MVJ9 347 aa12.32□□□□□ -0.44
RNF4-215ENST00000511843 OR10H2O60403 315 aa12.32□□□□□ -0.44
RNF4-215ENST00000511843 ZG16O60844 167 aa12.32□□□□□ -0.44
RNF4-215ENST00000511843 GLRA3O75311 464 aa12.32□□□□□ -0.44
RNF4-215ENST00000511843 PROCP04070 461 aa12.32□□□□□ -0.44
RNF4-215ENST00000511843 STSP08842 583 aa12.32□□□□□ -0.44
RNF4-215ENST00000511843 MYL2P10916 166 aa12.32□□□□□ -0.44
RNF4-215ENST00000511843 IMPDH1P20839 514 aa12.32□□□□□ -0.44
RNF4-215ENST00000511843 COL8A1P27658 744 aa12.32□□□□□ -0.44
RNF4-215ENST00000511843 NR0B1P51843 470 aaKnown RBP12.32□□□□□ -0.44
RNF4-215ENST00000511843 MAPK12P53778 367 aa12.32□□□□□ -0.44
RNF4-215ENST00000511843 GALNT1Q10472 559 aaPredicted RBP12.32□□□□□ -0.44
RNF4-215ENST00000511843 TBL3Q12788 808 aaKnown RBP12.32□□□□□ -0.44
RNF4-215ENST00000511843 ASPHQ12797 758 aa12.32□□□□□ -0.44
RNF4-215ENST00000511843 ZNF267Q14586 743 aaPredicted RBP12.32□□□□□ -0.44
RNF4-215ENST00000511843 RASA2Q15283 850 aa12.32□□□□□ -0.44
RNF4-215ENST00000511843 CCNYL2Q5T2Q4 361 aa12.32□□□□□ -0.44
RNF4-215ENST00000511843 NDUFAF5Q5TEU4 345 aa12.32□□□□□ -0.44
RNF4-215ENST00000511843 OR52E8Q6IFG1 317 aa12.32□□□□□ -0.44
RNF4-215ENST00000511843 ZYG11AQ6WRX3 759 aa12.32□□□□□ -0.44
RNF4-215ENST00000511843 SLC22A9Q8IVM8 553 aa12.32□□□□□ -0.44
RNF4-215ENST00000511843 SIAH3Q8IW03 269 aa12.32□□□□□ -0.44
RNF4-215ENST00000511843 C1orf52Q8N6N3 182 aaKnown RBP12.32□□□□□ -0.44
RNF4-215ENST00000511843 FAM98AQ8NCA5 519 aaKnown RBP12.32□□□□□ -0.44
RNF4-215ENST00000511843 ASB15Q8WXK1 588 aa12.32□□□□□ -0.44
RNF4-215ENST00000511843 L3HYPDHQ96EM0 354 aa12.32□□□□□ -0.44
RNF4-215ENST00000511843 RBM18Q96H35 190 aaKnown RBP12.32□□□□□ -0.44
RNF4-215ENST00000511843 ZNF382Q96SR6 550 aa12.32□□□□□ -0.44
RNF4-215ENST00000511843 GSTO2Q9H4Y5 243 aa12.32□□□□□ -0.44
RNF4-215ENST00000511843 WDR41Q9HAD4 459 aa12.32□□□□□ -0.44
RNF4-215ENST00000511843 DEPPQ9NTK1 212 aa12.32□□□□□ -0.44
RNF4-215ENST00000511843 HPF1Q9NWY4 346 aa12.32□□□□□ -0.44
RNF4-215ENST00000511843 COPS7AQ9UBW8 275 aa12.32□□□□□ -0.44
RNF4-215ENST00000511843 DCDC2Q9UHG0 476 aa12.32□□□□□ -0.44
RNF4-215ENST00000511843 FREM3P0C091 2139 aa12.32□□□□□ -0.44
RNF4-215ENST00000511843 ZNF407Q9C0G0 2248 aa12.31□□□□□ -0.44
RNF4-215ENST00000511843 PINLYPA6NC86 204 aa12.31□□□□□ -0.44
RNF4-215ENST00000511843 WIPF3A6NGB9 483 aa12.31□□□□□ -0.44
RNF4-215ENST00000511843 UBFD1O14562 309 aaKnown RBP12.31□□□□□ -0.44
RNF4-215ENST00000511843 PEX1O43933 1283 aa12.31□□□□□ -0.44
RNF4-215ENST00000511843 PLIN3O60664 434 aa12.31□□□□□ -0.44
RNF4-215ENST00000511843 CLPSP04118 112 aa12.31□□□□□ -0.44
RNF4-215ENST00000511843 IGKV3-11P04433 115 aa12.31□□□□□ -0.44
RNF4-215ENST00000511843 CT62P0C5K7 136 aa12.31□□□□□ -0.44
RNF4-215ENST00000511843 ZNF24P17028 368 aa12.31□□□□□ -0.44
RNF4-215ENST00000511843 PIK3R1P27986 724 aa12.31□□□□□ -0.44
RNF4-215ENST00000511843 HMOX2P30519 316 aa12.31□□□□□ -0.44
RNF4-215ENST00000511843 SSTR4P31391 388 aa12.31□□□□□ -0.44
RNF4-215ENST00000511843 FOXA1P55317 472 aa12.31□□□□□ -0.44
RNF4-215ENST00000511843 HMGCS1Q01581 520 aa12.31□□□□□ -0.44
RNF4-215ENST00000511843 LCP2Q13094 533 aa12.31□□□□□ -0.44
RNF4-215ENST00000511843 FAM180BQ6P0A1 224 aa12.31□□□□□ -0.44
RNF4-215ENST00000511843 TDRPQ86YL5 185 aa12.31□□□□□ -0.44
RNF4-215ENST00000511843 ST13P4Q8IZP2 240 aaPredicted RBP12.31□□□□□ -0.44
RNF4-215ENST00000511843 MYRIPQ8NFW9 859 aa12.31□□□□□ -0.44
RNF4-215ENST00000511843 METTL6Q8TCB7 284 aa12.31□□□□□ -0.44
RNF4-215ENST00000511843 FBXL20Q96IG2 436 aa12.31□□□□□ -0.44
RNF4-215ENST00000511843 GPR137Q96N19 417 aa12.31□□□□□ -0.44
RNF4-215ENST00000511843 GAL3ST4Q96RP7 486 aa12.31□□□□□ -0.44
RNF4-215ENST00000511843 ACPTQ9BZG2 426 aa12.31□□□□□ -0.44
RNF4-215ENST00000511843 SHCBP1LQ9BZQ2 653 aa12.31□□□□□ -0.44
RNF4-215ENST00000511843 BRF2Q9HAW0 419 aa12.31□□□□□ -0.44
RNF4-215ENST00000511843 TNFRSF12AQ9NP84 129 aa12.31□□□□□ -0.44
RNF4-215ENST00000511843 MID1IP1Q9NPA3 183 aa12.31□□□□□ -0.44
RNF4-215ENST00000511843 AHSPQ9NZD4 102 aa12.31□□□□□ -0.44
RNF4-215ENST00000511843 TINAGQ9UJW2 476 aa12.31□□□□□ -0.44
RNF4-215ENST00000511843 KLF13Q9Y2Y9 288 aaPredicted RBP12.31□□□□□ -0.44
RNF4-215ENST00000511843 CRYBG3Q68DQ2 2970 aa12.3□□□□□ -0.44
RNF4-215ENST00000511843 SYNDIG1LA6NDD5 238 aa12.3□□□□□ -0.44
RNF4-215ENST00000511843 MLYCDO95822 493 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms