RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 REXO4Q9GZR2 422 aaKnown RBP17.39■□□□□ 0.37
HMGCS1-206ENST00000511774 DEFB108AA8MXU0 73 aa17.38■□□□□ 0.37
HMGCS1-206ENST00000511774 FGF17O60258 216 aa17.38■□□□□ 0.37
HMGCS1-206ENST00000511774 IL18BPO95998 194 aa17.38■□□□□ 0.37
HMGCS1-206ENST00000511774 FGGP02679 453 aa17.38■□□□□ 0.37
HMGCS1-206ENST00000511774 ENO2P09104 434 aaPredicted RBP17.38■□□□□ 0.37
HMGCS1-206ENST00000511774 CDK9P50750 372 aaKnown RBP17.38■□□□□ 0.37
HMGCS1-206ENST00000511774 EFTUD2Q15029 972 aaKnown RBP eCLIP17.38■□□□□ 0.376e-14■■■□□ 16.8
HMGCS1-206ENST00000511774 EIPR1Q53HC9 387 aa17.38■□□□□ 0.37
HMGCS1-206ENST00000511774 TTC27Q6P3X3 843 aa17.38■□□□□ 0.37
HMGCS1-206ENST00000511774 MCUQ8NE86 351 aa17.38■□□□□ 0.37
HMGCS1-206ENST00000511774 SLC22A8Q8TCC7 542 aa17.38■□□□□ 0.37
HMGCS1-206ENST00000511774 ISL2Q96A47 359 aa17.38■□□□□ 0.37
HMGCS1-206ENST00000511774 PIGQQ9BRB3 760 aa17.38■□□□□ 0.37
HMGCS1-206ENST00000511774 XAB2Q9HCS7 855 aaKnown RBP17.38■□□□□ 0.37
HMGCS1-206ENST00000511774 CNIH4Q9P003 139 aa17.38■□□□□ 0.37
HMGCS1-206ENST00000511774 COPS7AQ9UBW8 275 aa17.38■□□□□ 0.37
HMGCS1-206ENST00000511774 ZNF490Q9ULM2 529 aaPredicted RBP17.38■□□□□ 0.37
HMGCS1-206ENST00000511774 TESMINQ9Y4I5 508 aa17.38■□□□□ 0.37
HMGCS1-206ENST00000511774 WIF1Q9Y5W5 379 aa17.38■□□□□ 0.37
HMGCS1-206ENST00000511774 NPEPPSL1A6NEC2 478 aa17.37■□□□□ 0.37
HMGCS1-206ENST00000511774 BANF1O75531 89 aa17.37■□□□□ 0.37
HMGCS1-206ENST00000511774 CLEC3AO75596 197 aa17.37■□□□□ 0.37
HMGCS1-206ENST00000511774 TRAPPC6AO75865 159 aa17.37■□□□□ 0.37
HMGCS1-206ENST00000511774 HPNP05981 417 aa17.37■□□□□ 0.37
HMGCS1-206ENST00000511774 CCDC175P0C221 793 aa17.37■□□□□ 0.37
HMGCS1-206ENST00000511774 TMIGD3P0DMS9 266 aaPredicted RBP17.37■□□□□ 0.37
HMGCS1-206ENST00000511774 NID1P14543 1247 aa17.37■□□□□ 0.37
HMGCS1-206ENST00000511774 IGLV3-21P80748 117 aaPredicted RBP17.37■□□□□ 0.37
HMGCS1-206ENST00000511774 PDAP1Q13442 181 aaKnown RBP17.37■□□□□ 0.37
HMGCS1-206ENST00000511774 SERTAD2Q14140 314 aa17.37■□□□□ 0.37
HMGCS1-206ENST00000511774 CRYMQ14894 314 aa17.37■□□□□ 0.37
HMGCS1-206ENST00000511774 TRIM40Q6P9F5 258 aa17.37■□□□□ 0.37
HMGCS1-206ENST00000511774 SYDE1Q6ZW31 735 aaPredicted RBP17.37■□□□□ 0.37
HMGCS1-206ENST00000511774 PM20D2Q8IYS1 436 aa17.37■□□□□ 0.37
HMGCS1-206ENST00000511774 SLC15A4Q8N697 577 aa17.37■□□□□ 0.37
HMGCS1-206ENST00000511774 ZNF597Q96LX8 424 aa17.37■□□□□ 0.37
HMGCS1-206ENST00000511774 GNRHR2Q96P88 292 aa17.37■□□□□ 0.37
HMGCS1-206ENST00000511774 CALHM2Q9HA72 323 aa17.37■□□□□ 0.37
HMGCS1-206ENST00000511774 PLAC1Q9HBJ0 212 aa17.37■□□□□ 0.37
HMGCS1-206ENST00000511774 ZKSCAN5Q9Y2L8 839 aa17.37■□□□□ 0.37
HMGCS1-206ENST00000511774 SYNDIG1LA6NDD5 238 aa17.36■□□□□ 0.37
HMGCS1-206ENST00000511774 PABPN1LA6NDY0 278 aaKnown RBP17.36■□□□□ 0.37
HMGCS1-206ENST00000511774 RTCAO00442 366 aaKnown RBP17.36■□□□□ 0.37
HMGCS1-206ENST00000511774 KRT14P02533 472 aa17.36■□□□□ 0.37
HMGCS1-206ENST00000511774 SLC6A12P48065 614 aa17.36■□□□□ 0.37
HMGCS1-206ENST00000511774 NTRK2Q16620 822 aa17.36■□□□□ 0.37
HMGCS1-206ENST00000511774 NHSL2Q5HYW2 709 aa17.36■□□□□ 0.37
HMGCS1-206ENST00000511774 TTLQ8NG68 377 aa17.36■□□□□ 0.37
HMGCS1-206ENST00000511774 PIGTQ969N2 578 aa17.36■□□□□ 0.37
HMGCS1-206ENST00000511774 BAG1Q99933 345 aaPredicted RBP17.36■□□□□ 0.37
HMGCS1-206ENST00000511774 UBTD1Q9HAC8 227 aa17.36■□□□□ 0.37
HMGCS1-206ENST00000511774 LYRM4Q9HD34 91 aa17.36■□□□□ 0.37
HMGCS1-206ENST00000511774 PRR14LQ5THK1 2151 aa17.35■□□□□ 0.37
HMGCS1-206ENST00000511774 A0A088AWK7 358 aa17.35■□□□□ 0.37
HMGCS1-206ENST00000511774 RNF212BA8MTL3 300 aa17.35■□□□□ 0.37
HMGCS1-206ENST00000511774 WDR47O94967 919 aa17.35■□□□□ 0.37
HMGCS1-206ENST00000511774 CNOT4O95628 575 aaKnown RBP17.35■□□□□ 0.37
HMGCS1-206ENST00000511774 CLPSP04118 112 aa17.35■□□□□ 0.37
HMGCS1-206ENST00000511774 CD22P20273 847 aa17.35■□□□□ 0.37
HMGCS1-206ENST00000511774 ZNF10P21506 573 aaPredicted RBP17.35■□□□□ 0.37
HMGCS1-206ENST00000511774 STT3AP46977 705 aa17.35■□□□□ 0.37
HMGCS1-206ENST00000511774 NAGLUP54802 743 aa17.35■□□□□ 0.37
HMGCS1-206ENST00000511774 CAPRIN1Q14444 709 aaKnown RBP17.35■□□□□ 0.37
HMGCS1-206ENST00000511774 ACKR1Q16570 336 aa17.35■□□□□ 0.37
HMGCS1-206ENST00000511774 WIPI1Q5MNZ9 446 aaPredicted RBP17.35■□□□□ 0.37
HMGCS1-206ENST00000511774 CNTN4Q8IWV2 1026 aa17.35■□□□□ 0.37
HMGCS1-206ENST00000511774 RNF10Q8N5U6 811 aaKnown RBP17.35■□□□□ 0.37
HMGCS1-206ENST00000511774 GPATCH11Q8N954 259 aa17.35■□□□□ 0.37
HMGCS1-206ENST00000511774 PDLIM5Q96HC4 596 aaKnown RBP17.35■□□□□ 0.37
HMGCS1-206ENST00000511774 HS3ST6Q96QI5 342 aa17.35■□□□□ 0.37
HMGCS1-206ENST00000511774 GAL3ST4Q96RP7 486 aa17.35■□□□□ 0.37
HMGCS1-206ENST00000511774 CCL19Q99731 98 aa17.35■□□□□ 0.37
HMGCS1-206ENST00000511774 TUBA1CQ9BQE3 449 aa17.35■□□□□ 0.37
HMGCS1-206ENST00000511774 G6PC3Q9BUM1 346 aa17.35■□□□□ 0.37
HMGCS1-206ENST00000511774 WWTR1Q9GZV5 400 aa17.35■□□□□ 0.37
HMGCS1-206ENST00000511774 NT5DC2Q9H857 520 aa17.35■□□□□ 0.37
HMGCS1-206ENST00000511774 COPS7BQ9H9Q2 264 aaPredicted RBP17.35■□□□□ 0.37
HMGCS1-206ENST00000511774 GUCA1BQ9UMX6 200 aa17.35■□□□□ 0.37
HMGCS1-206ENST00000511774 EIF3LQ9Y262 564 aaKnown RBP17.35■□□□□ 0.37
HMGCS1-206ENST00000511774 CR1P17927 2039 aa17.35■□□□□ 0.37
HMGCS1-206ENST00000511774 ANKRD33BA6NCL7 494 aa17.34■□□□□ 0.37
HMGCS1-206ENST00000511774 CTIFO43310 598 aaKnown RBP17.34■□□□□ 0.37
HMGCS1-206ENST00000511774 ERN1O75460 977 aaKnown RBP17.34■□□□□ 0.37
HMGCS1-206ENST00000511774 GNAZP19086 355 aa17.34■□□□□ 0.37
HMGCS1-206ENST00000511774 ATP5A1P25705 553 aaKnown RBP17.34■□□□□ 0.37
HMGCS1-206ENST00000511774 MSH2P43246 934 aa17.34■□□□□ 0.37
HMGCS1-206ENST00000511774 ZNF75DP51815 510 aa17.34■□□□□ 0.37
HMGCS1-206ENST00000511774 FBXW4P57775 412 aa17.34■□□□□ 0.37
HMGCS1-206ENST00000511774 TBL3Q12788 808 aaKnown RBP17.34■□□□□ 0.37
HMGCS1-206ENST00000511774 EBPQ15125 230 aaKnown RBP17.34■□□□□ 0.37
HMGCS1-206ENST00000511774 FBXO48Q5FWF7 155 aa17.34■□□□□ 0.37
HMGCS1-206ENST00000511774 NAT8LQ8N9F0 302 aa17.34■□□□□ 0.37
HMGCS1-206ENST00000511774 ACOT4Q8N9L9 421 aa17.34■□□□□ 0.37
HMGCS1-206ENST00000511774 GABPB2Q8TAK5 448 aaPredicted RBP17.34■□□□□ 0.37
HMGCS1-206ENST00000511774 DIO2Q92813 273 aa17.34■□□□□ 0.37
HMGCS1-206ENST00000511774 NTNG2Q96CW9 530 aa17.34■□□□□ 0.37
HMGCS1-206ENST00000511774 RILPQ96NA2 401 aa17.34■□□□□ 0.37
HMGCS1-206ENST00000511774 WFIKKN1Q96NZ8 548 aa17.34■□□□□ 0.37
HMGCS1-206ENST00000511774 C15orf41Q9Y2V0 281 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms