RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 CAPN12Q6ZSI9 719 aa9.5□□□□□ -0.89
MBD4-208ENST00000509828 YTHDF3Q7Z739 585 aaKnown RBP9.5□□□□□ -0.89
MBD4-208ENST00000509828 LUZP2Q86TE4 346 aa9.5□□□□□ -0.89
MBD4-208ENST00000509828 PPIL6Q8IXY8 311 aa9.5□□□□□ -0.89
MBD4-208ENST00000509828 OR10G3Q8NGC4 313 aa9.5□□□□□ -0.89
MBD4-208ENST00000509828 DOK4Q8TEW6 326 aa9.5□□□□□ -0.89
MBD4-208ENST00000509828 NANOS1Q8WY41 292 aaKnown RBP9.5□□□□□ -0.89
MBD4-208ENST00000509828 ABTB1Q969K4 478 aaPredicted RBP9.5□□□□□ -0.89
MBD4-208ENST00000509828 CFAP36Q96G28 342 aa9.5□□□□□ -0.89
MBD4-208ENST00000509828 PDLIM5Q96HC4 596 aaKnown RBP9.5□□□□□ -0.89
MBD4-208ENST00000509828 MAPKAP1Q9BPZ7 522 aa9.5□□□□□ -0.89
MBD4-208ENST00000509828 TBCDQ9BTW9 1192 aa9.5□□□□□ -0.89
MBD4-208ENST00000509828 PHACTR1Q9C0D0 580 aa9.5□□□□□ -0.89
MBD4-208ENST00000509828 PITHD1Q9GZP4 211 aaPredicted RBP9.5□□□□□ -0.89
MBD4-208ENST00000509828 NT5DC2Q9H857 520 aa9.5□□□□□ -0.89
MBD4-208ENST00000509828 CNOT10Q9H9A5 744 aaKnown RBP9.5□□□□□ -0.89
MBD4-208ENST00000509828 LZTFL1Q9NQ48 299 aa9.5□□□□□ -0.89
MBD4-208ENST00000509828 WWOXQ9NZC7 414 aa9.5□□□□□ -0.89
MBD4-208ENST00000509828 CORO1CQ9ULV4 474 aaPredicted RBP9.5□□□□□ -0.89
MBD4-208ENST00000509828 JMJD1CQ15652 2540 aa9.5□□□□□ -0.89
MBD4-208ENST00000509828 LRRC3CA6NJW4 275 aa9.49□□□□□ -0.89
MBD4-208ENST00000509828 CD8B2A6NJW9 211 aa9.49□□□□□ -0.89
MBD4-208ENST00000509828 KDM4EB2RXH2 506 aaPredicted RBP9.49□□□□□ -0.89
MBD4-208ENST00000509828 INAFM1C9JVW0 142 aa9.49□□□□□ -0.89
MBD4-208ENST00000509828 S100BP04271 92 aaPredicted RBP9.49□□□□□ -0.89
MBD4-208ENST00000509828 FBXO45P0C2W1 286 aa9.49□□□□□ -0.89
MBD4-208ENST00000509828 PCNAP12004 261 aa9.49□□□□□ -0.89
MBD4-208ENST00000509828 KRT15P19012 456 aa9.49□□□□□ -0.89
MBD4-208ENST00000509828 FPR1P21462 350 aa9.49□□□□□ -0.89
MBD4-208ENST00000509828 SSR2P43308 183 aa9.49□□□□□ -0.89
MBD4-208ENST00000509828 RAP1GDS1P52306 607 aa9.49□□□□□ -0.89
MBD4-208ENST00000509828 SLC12A2P55011 1212 aa9.49□□□□□ -0.89
MBD4-208ENST00000509828 DIO3P55073 304 aa9.49□□□□□ -0.89
MBD4-208ENST00000509828 CDKL1Q00532 357 aa9.49□□□□□ -0.89
MBD4-208ENST00000509828 CRYZQ08257 329 aaKnown RBP9.49□□□□□ -0.89
MBD4-208ENST00000509828 CBLBQ13191 982 aa9.49□□□□□ -0.89
MBD4-208ENST00000509828 BIKQ13323 160 aa9.49□□□□□ -0.89
MBD4-208ENST00000509828 LAPTM5Q13571 262 aa9.49□□□□□ -0.89
MBD4-208ENST00000509828 PPP1R7Q15435 360 aa9.49□□□□□ -0.89
MBD4-208ENST00000509828 C18orf21Q32NC0 220 aaPredicted RBP9.49□□□□□ -0.89
MBD4-208ENST00000509828 CCDC137Q6PK04 289 aaKnown RBP9.49□□□□□ -0.89
MBD4-208ENST00000509828 ADAMTSL2Q86TH1 951 aa9.49□□□□□ -0.89
MBD4-208ENST00000509828 C9orf40Q8IXQ3 194 aa9.49□□□□□ -0.89
MBD4-208ENST00000509828 LRRC75A-AS1Q8N1F1 130 aa9.49□□□□□ -0.89
MBD4-208ENST00000509828 CIARTQ8N365 385 aaPredicted RBP9.49□□□□□ -0.89
MBD4-208ENST00000509828 ACOT4Q8N9L9 421 aa9.49□□□□□ -0.89
MBD4-208ENST00000509828 SPC24Q8NBT2 197 aa9.49□□□□□ -0.89
MBD4-208ENST00000509828 SMPDL3BQ92485 455 aa9.49□□□□□ -0.89
MBD4-208ENST00000509828 PERPQ96FX8 193 aa9.49□□□□□ -0.89
MBD4-208ENST00000509828 CERS2Q96G23 380 aa9.49□□□□□ -0.89
MBD4-208ENST00000509828 VPS39Q96JC1 886 aa9.49□□□□□ -0.89
MBD4-208ENST00000509828 COX4I2Q96KJ9 171 aa9.49□□□□□ -0.89
MBD4-208ENST00000509828 SECISBP2Q96T21 854 aaKnown RBP9.49□□□□□ -0.89
MBD4-208ENST00000509828 CCL19Q99731 98 aa9.49□□□□□ -0.89
MBD4-208ENST00000509828 NAT9Q9BTE0 207 aa9.49□□□□□ -0.89
MBD4-208ENST00000509828 CALHM2Q9HA72 323 aa9.49□□□□□ -0.89
MBD4-208ENST00000509828 UBTD1Q9HAC8 227 aa9.49□□□□□ -0.89
MBD4-208ENST00000509828 PRDM7Q9NQW5 492 aa9.49□□□□□ -0.89
MBD4-208ENST00000509828 DNAJC11Q9NVH1 559 aa9.49□□□□□ -0.89
MBD4-208ENST00000509828 GPRC5BQ9NZH0 403 aa9.49□□□□□ -0.89
MBD4-208ENST00000509828 IKZF3Q9UKT9 509 aa9.49□□□□□ -0.89
MBD4-208ENST00000509828 OARD1Q9Y530 152 aa9.49□□□□□ -0.89
MBD4-208ENST00000509828 DNHD1Q96M86 4753 aa9.49□□□□□ -0.89
MBD4-208ENST00000509828 C2orf92A0A1B0GVN3 265 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 H0Y3Z8 333 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 RTCAO00442 366 aaKnown RBP9.48□□□□□ -0.89
MBD4-208ENST00000509828 FGF17O60258 216 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 SNX4O95219 450 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 IL18BPO95998 194 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 ALOX15P16050 662 aaPredicted RBP9.48□□□□□ -0.89
MBD4-208ENST00000509828 ATP5A1P25705 553 aaKnown RBP9.48□□□□□ -0.89
MBD4-208ENST00000509828 CPOXP36551 454 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 CDK9P50750 372 aaKnown RBP9.48□□□□□ -0.89
MBD4-208ENST00000509828 NRG3P56975 720 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 HERVK_113P63132 956 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 ERVK-8P63133 956 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 IRF8Q02556 426 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 SRYQ05066 204 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 SLAMF1Q13291 335 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 DOC2AQ14183 400 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 SETDB1Q15047 1291 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 TSNQ15631 228 aaKnown RBP9.48□□□□□ -0.89
MBD4-208ENST00000509828 ADPRMQ3LIE5 342 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 KBTBD12Q3ZCT8 623 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 TMEM35AQ53FP2 167 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 WIPI1Q5MNZ9 446 aaPredicted RBP9.48□□□□□ -0.89
MBD4-208ENST00000509828 VASNQ6EMK4 673 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 TTC27Q6P3X3 843 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 TMEM64Q6YI46 380 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 CXorf67Q86X51 503 aaPredicted RBP9.48□□□□□ -0.89
MBD4-208ENST00000509828 TMEM139Q8IV31 216 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 AGGF1Q8N302 714 aaeCLIP9.48□□□□□ -0.89
MBD4-208ENST00000509828 TCAIMQ8N3R3 496 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 GRK7Q8WTQ7 553 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 ANKRD7Q92527 254 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 TANKQ92844 425 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 UBE2E3Q969T4 207 aa9.48□□□□□ -0.89
MBD4-208ENST00000509828 ANKRD9Q96BM1 317 aaPredicted RBP9.48□□□□□ -0.89
MBD4-208ENST00000509828 INTS12Q96CB8 462 aaKnown RBP9.48□□□□□ -0.89
MBD4-208ENST00000509828 PTCD3Q96EY7 689 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms