RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 PMPCAQ10713 525 aa11.68□□□□□ -0.54
KDM3B-206ENST00000509468 UAP1Q16222 522 aaPredicted RBP11.68□□□□□ -0.54
KDM3B-206ENST00000509468 CPSF6Q16630 551 aaKnown RBP eCLIP11.68□□□□□ -0.54
KDM3B-206ENST00000509468 ZNF791Q3KP31 576 aaPredicted RBP11.68□□□□□ -0.54
KDM3B-206ENST00000509468 EMC4Q5J8M3 183 aa11.68□□□□□ -0.54
KDM3B-206ENST00000509468 C8orf74Q6P047 294 aa11.68□□□□□ -0.54
KDM3B-206ENST00000509468 MEX3BQ6ZN04 569 aaKnown RBP11.68□□□□□ -0.54
KDM3B-206ENST00000509468 SLC29A4Q7RTT9 530 aa11.68□□□□□ -0.54
KDM3B-206ENST00000509468 L3MBTL4Q8NA19 623 aa11.68□□□□□ -0.54
KDM3B-206ENST00000509468 ACBD4Q8NC06 268 aa11.68□□□□□ -0.54
KDM3B-206ENST00000509468 SREK1Q8WXA9 508 aaKnown RBP11.68□□□□□ -0.54
KDM3B-206ENST00000509468 RIT1Q92963 219 aa11.68□□□□□ -0.54
KDM3B-206ENST00000509468 ATP6V1E2Q96A05 226 aa11.68□□□□□ -0.54
KDM3B-206ENST00000509468 SORBS1Q9BX66 1292 aaKnown RBP11.68□□□□□ -0.54
KDM3B-206ENST00000509468 LDAHQ9H6V9 325 aa11.68□□□□□ -0.54
KDM3B-206ENST00000509468 DDX31Q9H8H2 851 aaKnown RBP11.68□□□□□ -0.54
KDM3B-206ENST00000509468 AHSPQ9NZD4 102 aa11.68□□□□□ -0.54
KDM3B-206ENST00000509468 CNIH4Q9P003 139 aa11.68□□□□□ -0.54
KDM3B-206ENST00000509468 MTRF1LQ9UGC7 380 aaKnown RBP11.68□□□□□ -0.54
KDM3B-206ENST00000509468 ASB4Q9Y574 426 aa11.68□□□□□ -0.54
KDM3B-206ENST00000509468 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.68□□□□□ -0.54
KDM3B-206ENST00000509468 HCFC1P51610 2035 aa11.68□□□□□ -0.54
KDM3B-206ENST00000509468 CACNA1CQ13936 2221 aa11.68□□□□□ -0.54
KDM3B-206ENST00000509468 PDZD2O15018 2839 aa11.68□□□□□ -0.54
KDM3B-206ENST00000509468 HMX2A2RU54 273 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 OR6C76A6NM76 312 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 FIGNL2A6NMB9 653 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 CAPN14A8MX76 684 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 OR10H2O60403 315 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 HOXD4P09016 255 aaPredicted RBP11.67□□□□□ -0.54
KDM3B-206ENST00000509468 FAM58BPP0C7Q3 252 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 SLC35E2P0CK97 266 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 ACVR2AP27037 513 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 SERPINB3P29508 390 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 MAGEA5P43359 124 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 MAN2A2P49641 1150 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 SERPINB8P50452 374 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 IRF9Q00978 393 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 SPRED3Q2MJR0 410 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 C10orf62Q5T681 223 aaPredicted RBP11.67□□□□□ -0.54
KDM3B-206ENST00000509468 C18orf63Q68DL7 685 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 MRM1Q6IN84 353 aaKnown RBP11.67□□□□□ -0.54
KDM3B-206ENST00000509468 ZNF585AQ6P3V2 769 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 TRILQ7L0X0 811 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 GOLGA7Q7Z5G4 137 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 RELL1Q8IUW5 271 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 RNF175Q8N4F7 328 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 MARVELD2Q8N4S9 558 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 TMEM251Q8N6I4 163 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 OR5M3Q8NGP4 307 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 SARAFQ96BY9 339 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 GPR78Q96P69 363 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 SMC6Q96SB8 1091 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 SERPINI1Q99574 410 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 LRRC1Q9BTT6 524 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 VPS11Q9H270 941 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 SLC24A3Q9HC58 644 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 ZDHHC18Q9NUE0 388 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 CPSF2Q9P2I0 782 aaKnown RBP11.67□□□□□ -0.54
KDM3B-206ENST00000509468 ACAD8Q9UKU7 415 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 RNF6Q9Y252 685 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 RNF11Q9Y3C5 154 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 IKBKGQ9Y6K9 419 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.67□□□□□ -0.54
KDM3B-206ENST00000509468 PKDREJQ9NTG1 2253 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 ABCA12Q86UK0 2595 aa11.67□□□□□ -0.54
KDM3B-206ENST00000509468 A0A0A6YYD5 115 aa11.66□□□□□ -0.54
KDM3B-206ENST00000509468 A0A0G2JMM0 328 aa11.66□□□□□ -0.54
KDM3B-206ENST00000509468 ATP6AP2A0A1C7CYW4 349 aa11.66□□□□□ -0.54
KDM3B-206ENST00000509468 A0A1W2PPB8 328 aa11.66□□□□□ -0.54
KDM3B-206ENST00000509468 A0A1W2PR48 441 aa11.66□□□□□ -0.54
KDM3B-206ENST00000509468 A0A1W2PRS3 328 aa11.66□□□□□ -0.54
KDM3B-206ENST00000509468 KIR3DP1A8MWS1 328 aa11.66□□□□□ -0.54
KDM3B-206ENST00000509468 G3V3Y1 287 aa11.66□□□□□ -0.54
KDM3B-206ENST00000509468 AQP7O14520 342 aa11.66□□□□□ -0.54
KDM3B-206ENST00000509468 HCN1O60741 890 aa11.66□□□□□ -0.54
KDM3B-206ENST00000509468 ZNF354AO60765 605 aaPredicted RBP11.66□□□□□ -0.54
KDM3B-206ENST00000509468 ATP6AP2O75787 350 aa11.66□□□□□ -0.54
KDM3B-206ENST00000509468 CCL3P10147 92 aa11.66□□□□□ -0.54
KDM3B-206ENST00000509468 COL6A2P12110 1019 aa11.66□□□□□ -0.54
KDM3B-206ENST00000509468 BSGP35613 385 aa11.66□□□□□ -0.54
KDM3B-206ENST00000509468 ARL1P40616 181 aaPredicted RBP11.66□□□□□ -0.54
KDM3B-206ENST00000509468 DNASE1L1P49184 302 aa11.66□□□□□ -0.54
KDM3B-206ENST00000509468 CCNG1P51959 295 aa11.66□□□□□ -0.54
KDM3B-206ENST00000509468 HNRNPH2P55795 449 aaKnown RBP11.66□□□□□ -0.54
KDM3B-206ENST00000509468 FOXO1Q12778 655 aa11.66□□□□□ -0.54
KDM3B-206ENST00000509468 ZNF267Q14586 743 aaPredicted RBP11.66□□□□□ -0.54
KDM3B-206ENST00000509468 RNF111Q6ZNA4 994 aa11.66□□□□□ -0.54
KDM3B-206ENST00000509468 NUDT13Q86X67 352 aa11.66□□□□□ -0.54
KDM3B-206ENST00000509468 C9orf40Q8IXQ3 194 aa11.66□□□□□ -0.54
KDM3B-206ENST00000509468 TAGAPQ8N103 731 aa11.66□□□□□ -0.54
KDM3B-206ENST00000509468 OR10Q1Q8NGQ4 319 aa11.66□□□□□ -0.54
KDM3B-206ENST00000509468 WDR20Q8TBZ3 569 aa11.66□□□□□ -0.54
KDM3B-206ENST00000509468 PAQR8Q8TEZ7 354 aa11.66□□□□□ -0.54
KDM3B-206ENST00000509468 SPACA9Q96E40 222 aaPredicted RBP11.66□□□□□ -0.54
KDM3B-206ENST00000509468 TREX2Q9BQ50 279 aaPredicted RBP11.66□□□□□ -0.54
KDM3B-206ENST00000509468 CNPPD1Q9BV87 410 aa11.66□□□□□ -0.54
KDM3B-206ENST00000509468 ACSS3Q9H6R3 686 aa11.66□□□□□ -0.54
KDM3B-206ENST00000509468 EXO5Q9H790 373 aa11.66□□□□□ -0.54
KDM3B-206ENST00000509468 NOL11Q9H8H0 719 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms