RNA–Protein interactions for RNA: ENST00000509420.5

SDHA-210, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 580 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-210ENST00000509420 CPSF6Q16630 551 aaKnown RBP eCLIP12.32□□□□□ -0.44
SDHA-210ENST00000509420 MPEG1Q2M385 716 aa12.32□□□□□ -0.44
SDHA-210ENST00000509420 HYAL4Q2M3T9 481 aa12.32□□□□□ -0.44
SDHA-210ENST00000509420 SPRED3Q2MJR0 410 aa12.32□□□□□ -0.44
SDHA-210ENST00000509420 TMEM251Q8N6I4 163 aa12.32□□□□□ -0.44
SDHA-210ENST00000509420 PTGR2Q8N8N7 351 aaPredicted RBP12.32□□□□□ -0.44
SDHA-210ENST00000509420 NUBPLQ8TB37 319 aa12.32□□□□□ -0.44
SDHA-210ENST00000509420 ASB15Q8WXK1 588 aa12.32□□□□□ -0.44
SDHA-210ENST00000509420 ANP32BQ92688 251 aaKnown RBP12.32□□□□□ -0.44
SDHA-210ENST00000509420 RGMAQ96B86 450 aa12.32□□□□□ -0.44
SDHA-210ENST00000509420 FBXL20Q96IG2 436 aa12.32□□□□□ -0.44
SDHA-210ENST00000509420 PAFAH2Q99487 392 aa12.32□□□□□ -0.44
SDHA-210ENST00000509420 CCDC77Q9BR77 488 aa12.32□□□□□ -0.44
SDHA-210ENST00000509420 TIMMDC1Q9NPL8 285 aa12.32□□□□□ -0.44
SDHA-210ENST00000509420 NPDC1Q9NQX5 325 aaPredicted RBP12.32□□□□□ -0.44
SDHA-210ENST00000509420 HPF1Q9NWY4 346 aa12.32□□□□□ -0.44
SDHA-210ENST00000509420 TEX10Q9NXF1 929 aaPredicted RBP12.32□□□□□ -0.44
SDHA-210ENST00000509420 PSD3Q9NYI0 1048 aa12.32□□□□□ -0.44
SDHA-210ENST00000509420 ADGRE2Q9UHX3 823 aa12.32□□□□□ -0.44
SDHA-210ENST00000509420 FREM3P0C091 2139 aa12.32□□□□□ -0.44
SDHA-210ENST00000509420 INTS1Q8N201 2190 aaKnown RBP12.32□□□□□ -0.44
SDHA-210ENST00000509420 A0A1B0GVC2 190 aa12.31□□□□□ -0.44
SDHA-210ENST00000509420 LRRC3CA6NJW4 275 aa12.31□□□□□ -0.44
SDHA-210ENST00000509420 GLOD5A6NK44 160 aa12.31□□□□□ -0.44
SDHA-210ENST00000509420 FOXE1O00358 373 aaPredicted RBP12.31□□□□□ -0.44
SDHA-210ENST00000509420 PGRMC2O15173 223 aa12.31□□□□□ -0.44
SDHA-210ENST00000509420 PDE9AO76083 593 aa12.31□□□□□ -0.44
SDHA-210ENST00000509420 ACSL3O95573 720 aa12.31□□□□□ -0.44
SDHA-210ENST00000509420 MLYCDO95822 493 aa12.31□□□□□ -0.44
SDHA-210ENST00000509420 GBAP04062 536 aa12.31□□□□□ -0.44
SDHA-210ENST00000509420 SNRPB2P08579 225 aaKnown RBP12.31□□□□□ -0.44
SDHA-210ENST00000509420 RPS17P08708 135 aaKnown RBP12.31□□□□□ -0.44
SDHA-210ENST00000509420 CT62P0C5K7 136 aa12.31□□□□□ -0.44
SDHA-210ENST00000509420 GFAPP14136 432 aa12.31□□□□□ -0.44
SDHA-210ENST00000509420 TYK2P29597 1187 aa12.31□□□□□ -0.44
SDHA-210ENST00000509420 PTGER4P35408 488 aa12.31□□□□□ -0.44
SDHA-210ENST00000509420 DNASE1L1P49184 302 aa12.31□□□□□ -0.44
SDHA-210ENST00000509420 CKAP4Q07065 602 aaKnown RBP12.31□□□□□ -0.44
SDHA-210ENST00000509420 ASPHQ12797 758 aa12.31□□□□□ -0.44
SDHA-210ENST00000509420 RCN2Q14257 317 aa12.31□□□□□ -0.44
SDHA-210ENST00000509420 UAP1Q16222 522 aaPredicted RBP12.31□□□□□ -0.44
SDHA-210ENST00000509420 WHAMMP3Q1A5X7 153 aa12.31□□□□□ -0.44
SDHA-210ENST00000509420 RTL6Q6ICC9 239 aa12.31□□□□□ -0.44
SDHA-210ENST00000509420 METTL2BQ6P1Q9 378 aaKnown RBP12.31□□□□□ -0.44
SDHA-210ENST00000509420 GOLM1Q8NBJ4 401 aa12.31□□□□□ -0.44
SDHA-210ENST00000509420 TANKQ92844 425 aa12.31□□□□□ -0.44
SDHA-210ENST00000509420 MTFMTQ96DP5 389 aaKnown RBP12.31□□□□□ -0.44
SDHA-210ENST00000509420 NTMT1Q9BV86 223 aa12.31□□□□□ -0.44
SDHA-210ENST00000509420 ENKD1Q9H0I2 346 aa12.31□□□□□ -0.44
SDHA-210ENST00000509420 DEFB127Q9H1M4 99 aa12.31□□□□□ -0.44
SDHA-210ENST00000509420 NOL11Q9H8H0 719 aaKnown RBP12.31□□□□□ -0.44
SDHA-210ENST00000509420 ACTR8Q9H981 624 aa12.31□□□□□ -0.44
SDHA-210ENST00000509420 TUBA8Q9NY65 449 aaPredicted RBP12.31□□□□□ -0.44
SDHA-210ENST00000509420 CPSF2Q9P2I0 782 aaKnown RBP12.31□□□□□ -0.44
SDHA-210ENST00000509420 XPR1Q9UBH6 696 aa12.31□□□□□ -0.44
SDHA-210ENST00000509420 PCDHGA11Q9Y5H2 935 aa12.31□□□□□ -0.44
SDHA-210ENST00000509420 FAM215AQ9Y5M1 114 aa12.31□□□□□ -0.44
SDHA-210ENST00000509420 CHCHD2Q9Y6H1 151 aaPredicted RBP12.31□□□□□ -0.44
SDHA-210ENST00000509420 NINQ8N4C6 2090 aa12.31□□□□□ -0.44
SDHA-210ENST00000509420 MTORP42345 2549 aa12.3□□□□□ -0.44
SDHA-210ENST00000509420 STX16-NPEPL1H3BU86 382 aa12.3□□□□□ -0.44
SDHA-210ENST00000509420 STX16O14662 325 aa12.3□□□□□ -0.44
SDHA-210ENST00000509420 CDC40O60508 579 aaKnown RBP eCLIP12.3□□□□□ -0.44
SDHA-210ENST00000509420 GPR75O95800 540 aa12.3□□□□□ -0.44
SDHA-210ENST00000509420 RFPL3SP0C7P2 107 aa12.3□□□□□ -0.44
SDHA-210ENST00000509420 FAM58BPP0C7Q3 252 aa12.3□□□□□ -0.44
SDHA-210ENST00000509420 ESRRAP11474 423 aaPredicted RBP12.3□□□□□ -0.44
SDHA-210ENST00000509420 ALOX15P16050 662 aaPredicted RBP12.3□□□□□ -0.44
SDHA-210ENST00000509420 S1PR1P21453 382 aa12.3□□□□□ -0.44
SDHA-210ENST00000509420 CNR1P21554 472 aa12.3□□□□□ -0.44
SDHA-210ENST00000509420 PTX3P26022 381 aaPredicted RBP12.3□□□□□ -0.44
SDHA-210ENST00000509420 PIGAP37287 484 aa12.3□□□□□ -0.44
SDHA-210ENST00000509420 MAGEA5P43359 124 aa12.3□□□□□ -0.44
SDHA-210ENST00000509420 SMSP52788 366 aa12.3□□□□□ -0.44
SDHA-210ENST00000509420 CASP6P55212 293 aa12.3□□□□□ -0.44
SDHA-210ENST00000509420 PPIAP62937 165 aaKnown RBP12.3□□□□□ -0.44
SDHA-210ENST00000509420 DUSP8Q13202 625 aa12.3□□□□□ -0.44
SDHA-210ENST00000509420 EBPQ15125 230 aaKnown RBP12.3□□□□□ -0.44
SDHA-210ENST00000509420 RTL4Q6ZR62 310 aa12.3□□□□□ -0.44
SDHA-210ENST00000509420 ST13P4Q8IZP2 240 aaPredicted RBP12.3□□□□□ -0.44
SDHA-210ENST00000509420 MMP21Q8N119 569 aa12.3□□□□□ -0.44
SDHA-210ENST00000509420 PAQR8Q8TEZ7 354 aa12.3□□□□□ -0.44
SDHA-210ENST00000509420 ZNF483Q8TF39 744 aaPredicted RBP12.3□□□□□ -0.44
SDHA-210ENST00000509420 PHF21BQ96EK2 531 aa12.3□□□□□ -0.44
SDHA-210ENST00000509420 C1QTNF3Q9BXJ4 246 aa12.3□□□□□ -0.44
SDHA-210ENST00000509420 WWTR1Q9GZV5 400 aa12.3□□□□□ -0.44
SDHA-210ENST00000509420 VPS11Q9H270 941 aa12.3□□□□□ -0.44
SDHA-210ENST00000509420 EPB41L4BQ9H329 900 aa12.3□□□□□ -0.44
SDHA-210ENST00000509420 CHST11Q9NPF2 352 aa12.3□□□□□ -0.44
SDHA-210ENST00000509420 FARSBQ9NSD9 589 aaKnown RBP12.3□□□□□ -0.44
SDHA-210ENST00000509420 PNPLA3Q9NST1 481 aa12.3□□□□□ -0.44
SDHA-210ENST00000509420 MS4A12Q9NXJ0 267 aa12.3□□□□□ -0.44
SDHA-210ENST00000509420 TNFRSF10DQ9UBN6 386 aa12.3□□□□□ -0.44
SDHA-210ENST00000509420 PHF11Q9UIL8 331 aa12.3□□□□□ -0.44
SDHA-210ENST00000509420 CES1P1Q9UKY3 287 aa12.3□□□□□ -0.44
SDHA-210ENST00000509420 ERVK-11Q9UQG0 969 aa12.3□□□□□ -0.44
SDHA-210ENST00000509420 KIAA1549Q9HCM3 1950 aa12.3□□□□□ -0.44
SDHA-210ENST00000509420 VPS13CQ709C8 3753 aa12.3□□□□□ -0.44
SDHA-210ENST00000509420 ANKHD1Q8IWZ3 2542 aaKnown RBP12.3□□□□□ -0.44
SDHA-210ENST00000509420 PRRG2O14669 202 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms