RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 HOMER3Q9NSC5 361 aa8.61□□□□□ -1.03
NEDD9-211ENST00000508546 IARS2Q9NSE4 1012 aaKnown RBP8.61□□□□□ -1.03
NEDD9-211ENST00000508546 CNOT11Q9UKZ1 510 aaKnown RBP8.61□□□□□ -1.03
NEDD9-211ENST00000508546 CHCHD2Q9Y6H1 151 aaPredicted RBP8.61□□□□□ -1.03
NEDD9-211ENST00000508546 MYOCOSA0A1B0GUC4 107 aa8.6□□□□□ -1.03
NEDD9-211ENST00000508546 ANKRD33BA6NCL7 494 aa8.6□□□□□ -1.03
NEDD9-211ENST00000508546 TRIM64A6NGJ6 449 aa8.6□□□□□ -1.03
NEDD9-211ENST00000508546 ANKDD1BA6NHY2 528 aa8.6□□□□□ -1.03
NEDD9-211ENST00000508546 TRIM64BA6NI03 449 aa8.6□□□□□ -1.03
NEDD9-211ENST00000508546 LDB3O75112 727 aa8.6□□□□□ -1.03
NEDD9-211ENST00000508546 TRIM3O75382 744 aaPredicted RBP8.6□□□□□ -1.03
NEDD9-211ENST00000508546 AHSGP02765 367 aa8.6□□□□□ -1.03
NEDD9-211ENST00000508546 IGKV3-11P04433 115 aa8.6□□□□□ -1.03
NEDD9-211ENST00000508546 FBXO45P0C2W1 286 aa8.6□□□□□ -1.03
NEDD9-211ENST00000508546 CERS1P27544 350 aa8.6□□□□□ -1.03
NEDD9-211ENST00000508546 SERPINB3P29508 390 aa8.6□□□□□ -1.03
NEDD9-211ENST00000508546 VPS41P49754 854 aa8.6□□□□□ -1.03
NEDD9-211ENST00000508546 PLA2G16P53816 162 aa8.6□□□□□ -1.03
NEDD9-211ENST00000508546 TERF1P54274 439 aa8.6□□□□□ -1.03
NEDD9-211ENST00000508546 IGLV3-21P80748 117 aaPredicted RBP8.6□□□□□ -1.03
NEDD9-211ENST00000508546 CDKL1Q00532 357 aa8.6□□□□□ -1.03
NEDD9-211ENST00000508546 PDAP1Q13442 181 aaKnown RBP8.6□□□□□ -1.03
NEDD9-211ENST00000508546 TRIP13Q15645 432 aaPredicted RBP8.6□□□□□ -1.03
NEDD9-211ENST00000508546 NTRK2Q16620 822 aa8.6□□□□□ -1.03
NEDD9-211ENST00000508546 PPP1R3AQ16821 1122 aa8.6□□□□□ -1.03
NEDD9-211ENST00000508546 NHSL2Q5HYW2 709 aa8.6□□□□□ -1.03
NEDD9-211ENST00000508546 TBCELQ5QJ74 424 aa8.6□□□□□ -1.03
NEDD9-211ENST00000508546 CNTN4Q8IWV2 1026 aa8.6□□□□□ -1.03
NEDD9-211ENST00000508546 C9orf40Q8IXQ3 194 aa8.6□□□□□ -1.03
NEDD9-211ENST00000508546 KRT78Q8N1N4 520 aa8.6□□□□□ -1.03
NEDD9-211ENST00000508546 FAM13CQ8NE31 585 aa8.6□□□□□ -1.03
NEDD9-211ENST00000508546 OR10G3Q8NGC4 313 aa8.6□□□□□ -1.03
NEDD9-211ENST00000508546 CCT6BQ92526 530 aa8.6□□□□□ -1.03
NEDD9-211ENST00000508546 ANKRD7Q92527 254 aa8.6□□□□□ -1.03
NEDD9-211ENST00000508546 ANKRD9Q96BM1 317 aaPredicted RBP8.6□□□□□ -1.03
NEDD9-211ENST00000508546 SENP5Q96HI0 755 aaPredicted RBP8.6□□□□□ -1.03
NEDD9-211ENST00000508546 ART5Q96L15 291 aa8.6□□□□□ -1.03
NEDD9-211ENST00000508546 ZNF597Q96LX8 424 aa8.6□□□□□ -1.03
NEDD9-211ENST00000508546 RUNDC3BQ96NL0 473 aa8.6□□□□□ -1.03
NEDD9-211ENST00000508546 DOHHQ9BU89 302 aa8.6□□□□□ -1.03
NEDD9-211ENST00000508546 RBM24Q9BX46 236 aaKnown RBP8.6□□□□□ -1.03
NEDD9-211ENST00000508546 UBQLN3Q9H347 655 aa8.6□□□□□ -1.03
NEDD9-211ENST00000508546 COPS7BQ9H9Q2 264 aaPredicted RBP8.6□□□□□ -1.03
NEDD9-211ENST00000508546 PRDM7Q9NQW5 492 aa8.6□□□□□ -1.03
NEDD9-211ENST00000508546 EIF3LQ9Y262 564 aaKnown RBP8.6□□□□□ -1.03
NEDD9-211ENST00000508546 CASKO14936 926 aa8.59□□□□□ -1.03
NEDD9-211ENST00000508546 ERN1O75460 977 aaKnown RBP8.59□□□□□ -1.03
NEDD9-211ENST00000508546 FGGP02679 453 aa8.59□□□□□ -1.03
NEDD9-211ENST00000508546 HPNP05981 417 aa8.59□□□□□ -1.03
NEDD9-211ENST00000508546 TMIGD3P0DMS9 266 aaPredicted RBP8.59□□□□□ -1.03
NEDD9-211ENST00000508546 COX7A2P14406 83 aa8.59□□□□□ -1.03
NEDD9-211ENST00000508546 BMP7P18075 431 aa8.59□□□□□ -1.03
NEDD9-211ENST00000508546 STT3AP46977 705 aa8.59□□□□□ -1.03
NEDD9-211ENST00000508546 HNMTP50135 292 aa8.59□□□□□ -1.03
NEDD9-211ENST00000508546 CDK9P50750 372 aaKnown RBP8.59□□□□□ -1.03
NEDD9-211ENST00000508546 AGFG1P52594 562 aaKnown RBP8.59□□□□□ -1.03
NEDD9-211ENST00000508546 TGM3Q08188 693 aa8.59□□□□□ -1.03
NEDD9-211ENST00000508546 CBLBQ13191 982 aa8.59□□□□□ -1.03
NEDD9-211ENST00000508546 BIKQ13323 160 aa8.59□□□□□ -1.03
NEDD9-211ENST00000508546 SLBPQ14493 270 aaKnown RBP eCLIP8.59□□□□□ -1.03
NEDD9-211ENST00000508546 CRYMQ14894 314 aa8.59□□□□□ -1.03
NEDD9-211ENST00000508546 KCTD19Q17RG1 926 aaPredicted RBP8.59□□□□□ -1.03
NEDD9-211ENST00000508546 VN1R5Q7Z5H4 357 aa8.59□□□□□ -1.03
NEDD9-211ENST00000508546 YTHDF3Q7Z739 585 aaKnown RBP8.59□□□□□ -1.03
NEDD9-211ENST00000508546 ZPLD1Q8TCW7 415 aa8.59□□□□□ -1.03
NEDD9-211ENST00000508546 WDYHV1Q96HA8 205 aa8.59□□□□□ -1.03
NEDD9-211ENST00000508546 FBXL20Q96IG2 436 aa8.59□□□□□ -1.03
NEDD9-211ENST00000508546 JSRP1Q96MG2 331 aaPredicted RBP8.59□□□□□ -1.03
NEDD9-211ENST00000508546 ZFP3Q96NJ6 502 aa8.59□□□□□ -1.03
NEDD9-211ENST00000508546 TRIB1Q96RU8 372 aa8.59□□□□□ -1.03
NEDD9-211ENST00000508546 SFXN3Q9BWM7 321 aa8.59□□□□□ -1.03
NEDD9-211ENST00000508546 ROGDIQ9GZN7 287 aa8.59□□□□□ -1.03
NEDD9-211ENST00000508546 EHD1Q9H4M9 534 aa8.59□□□□□ -1.03
NEDD9-211ENST00000508546 LZTFL1Q9NQ48 299 aa8.59□□□□□ -1.03
NEDD9-211ENST00000508546 GALNT8Q9NY28 637 aa8.59□□□□□ -1.03
NEDD9-211ENST00000508546 NDRG3Q9UGV2 375 aa8.59□□□□□ -1.03
NEDD9-211ENST00000508546 IKZF3Q9UKT9 509 aa8.59□□□□□ -1.03
NEDD9-211ENST00000508546 CORO1CQ9ULV4 474 aaPredicted RBP8.59□□□□□ -1.03
NEDD9-211ENST00000508546 CAMK2AQ9UQM7 478 aa8.59□□□□□ -1.03
NEDD9-211ENST00000508546 VWA7Q9Y334 891 aa8.59□□□□□ -1.03
NEDD9-211ENST00000508546 CR1P17927 2039 aa8.58□□□□□ -1.04
NEDD9-211ENST00000508546 GOLGA8MH3BSY2 632 aa8.58□□□□□ -1.04
NEDD9-211ENST00000508546 DYRK3O43781 588 aa8.58□□□□□ -1.04
NEDD9-211ENST00000508546 WDR47O94967 919 aa8.58□□□□□ -1.04
NEDD9-211ENST00000508546 SNX4O95219 450 aa8.58□□□□□ -1.04
NEDD9-211ENST00000508546 ACSL3O95573 720 aa8.58□□□□□ -1.04
NEDD9-211ENST00000508546 TTC4O95801 387 aa8.58□□□□□ -1.04
NEDD9-211ENST00000508546 KRT14P02533 472 aa8.58□□□□□ -1.04
NEDD9-211ENST00000508546 PGAM1P18669 254 aa8.58□□□□□ -1.04
NEDD9-211ENST00000508546 FPR1P21462 350 aa8.58□□□□□ -1.04
NEDD9-211ENST00000508546 RPL21P46778 160 aaKnown RBP8.58□□□□□ -1.04
NEDD9-211ENST00000508546 SLC6A12P48065 614 aa8.58□□□□□ -1.04
NEDD9-211ENST00000508546 KCNC1P48547 511 aa8.58□□□□□ -1.04
NEDD9-211ENST00000508546 PCYT1AP49585 367 aa8.58□□□□□ -1.04
NEDD9-211ENST00000508546 ETF1P62495 437 aaKnown RBP8.58□□□□□ -1.04
NEDD9-211ENST00000508546 KRTAP1-1Q07627 177 aa8.58□□□□□ -1.04
NEDD9-211ENST00000508546 RCAN2Q14206 197 aa8.58□□□□□ -1.04
NEDD9-211ENST00000508546 FAM45BPQ6NSW5 357 aa8.58□□□□□ -1.04
NEDD9-211ENST00000508546 ZNF662Q6ZS27 426 aa8.58□□□□□ -1.04
NEDD9-211ENST00000508546 C9orf106Q8NAJ2 232 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms