RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 EXTL2Q9UBQ6 330 aa6.77□□□□□ -1.33
CLCN3-206ENST00000507875 IL19Q9UHD0 177 aa6.77□□□□□ -1.33
CLCN3-206ENST00000507875 CBY1Q9Y3M2 126 aa6.77□□□□□ -1.33
CLCN3-206ENST00000507875 TMEM247A6NEH6 219 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 LIPT2A6NK58 231 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 TMEM114B3SHH9 223 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 PLRG1O43660 514 aaKnown RBP6.76□□□□□ -1.33
CLCN3-206ENST00000507875 TRIM13O60858 407 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 MTX2O75431 263 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 KLF8O95600 359 aaPredicted RBP6.76□□□□□ -1.33
CLCN3-206ENST00000507875 ANP32DO95626 131 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 IGLV3-19P01714 112 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 SLC35E2BP0CK96 405 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 HLA-EP13747 358 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 ENO3P13929 434 aaPredicted RBP6.76□□□□□ -1.33
CLCN3-206ENST00000507875 CPT2P23786 658 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 OXTRP30559 389 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 CSTF2P33240 577 aaKnown RBP eCLIP6.76□□□□□ -1.33
CLCN3-206ENST00000507875 P2RY2P41231 377 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 PSMD8P48556 350 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 CLCNKAP51800 687 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 RRADP55042 308 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 TAS2R39P59534 338 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 PLOD1Q02809 727 aaPredicted RBP6.76□□□□□ -1.33
CLCN3-206ENST00000507875 TUBB3Q13509 450 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 TRA2AQ13595 282 aaKnown RBP eCLIP6.76□□□□□ -1.33
CLCN3-206ENST00000507875 CYLC2Q14093 348 aaPredicted RBP6.76□□□□□ -1.33
CLCN3-206ENST00000507875 CHRNA6Q15825 494 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 FAM214AQ32MH5 1076 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 PLEKHN1Q494U1 663 aaPredicted RBP6.76□□□□□ -1.33
CLCN3-206ENST00000507875 PIP5KL1Q5T9C9 394 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 METTL2BQ6P1Q9 378 aaKnown RBP6.76□□□□□ -1.33
CLCN3-206ENST00000507875 MMAAQ8IVH4 418 aaKnown RBP6.76□□□□□ -1.33
CLCN3-206ENST00000507875 METTL25Q8N6Q8 603 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 MCUR1Q96AQ8 359 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 NUS1Q96E22 293 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 DCUN1D1Q96GG9 259 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 FER1L6-AS2Q96M78 137 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 MNTQ99583 582 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 THUMPD3Q9BV44 507 aaKnown RBP6.76□□□□□ -1.33
CLCN3-206ENST00000507875 GON7Q9BXV9 100 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 DERL2Q9GZP9 239 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 ABCG8Q9H221 673 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 SGK2Q9HBY8 427 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 HEBP1Q9NRV9 189 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 SH3BP4Q9P0V3 963 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 NCDNQ9UBB6 729 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 TRMT6Q9UJA5 497 aaKnown RBP6.76□□□□□ -1.33
CLCN3-206ENST00000507875 DHRS7Q9Y394 339 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 ADAM18Q9Y3Q7 739 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 LYVE1Q9Y5Y7 322 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 TARM1B6A8C7 271 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 ZNF195O14628 629 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 GPRIN2O60269 458 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 TM7SF2O76062 418 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 RHOBTB1O94844 696 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 PDGFBP01127 241 aaPredicted RBP6.76□□□□□ -1.33
CLCN3-206ENST00000507875 FTH1P02794 183 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 ENO1P06733 434 aaKnown RBP6.76□□□□□ -1.33
CLCN3-206ENST00000507875 MPC1LP0DKB6 136 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 GM2AP17900 193 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 SAT1P21673 171 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 DGKAP23743 735 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 TRIM23P36406 574 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 RGS4P49798 205 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 DGKEP52429 567 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 DNAJB13P59910 316 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 RPS21P63220 83 aaKnown RBP6.76□□□□□ -1.33
CLCN3-206ENST00000507875 MESP2Q0VG99 397 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 ACOX1Q15067 660 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 PLEKHS1Q5SXH7 462 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 LIPMQ5VYY2 423 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 ERICH5Q6P6B1 374 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 ZNF549Q6P9A3 640 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 NAPRTQ6XQN6 538 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 MAVSQ7Z434 540 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 HSD11B1LQ7Z5J1 315 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 TSPAN33Q86UF1 283 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 PDSS2Q86YH6 399 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 TMPRSS6Q8IU80 811 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 TMEM151AQ8N4L1 468 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 ANKFN1Q8N957 763 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 OR6S1Q8NH40 331 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 ATOH1Q92858 354 aaPredicted RBP6.76□□□□□ -1.33
CLCN3-206ENST00000507875 ART5Q96L15 291 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 BIRC8Q96P09 236 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 FCRL4Q96PJ5 515 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 RBM4BQ9BQ04 359 aaKnown RBP6.76□□□□□ -1.33
CLCN3-206ENST00000507875 RBM4Q9BWF3 364 aaKnown RBP6.76□□□□□ -1.33
CLCN3-206ENST00000507875 SLC32A1Q9H598 525 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 RNPEPL1Q9HAU8 725 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 FBRSL1Q9HCM7 1045 aaKnown RBP6.76□□□□□ -1.33
CLCN3-206ENST00000507875 BPIFA1Q9NP55 256 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 SMPD3Q9NY59 655 aaPredicted RBP6.76□□□□□ -1.33
CLCN3-206ENST00000507875 NOP53Q9NZM5 478 aaKnown RBP6.76□□□□□ -1.33
CLCN3-206ENST00000507875 POMT1Q9Y6A1 747 aa6.76□□□□□ -1.33
CLCN3-206ENST00000507875 OR51F1A6NGY5 319 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 SH2D7A6NKC9 451 aaPredicted RBP6.75□□□□□ -1.33
CLCN3-206ENST00000507875 SYCE1LA8MT33 242 aa6.75□□□□□ -1.33
CLCN3-206ENST00000507875 E5RI56 91 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms