RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 SAXO2Q658L1 398 aa20.9■□□□□ 0.94
SPCS3-203ENST00000507678 DNAJC22Q8N4W6 341 aa20.9■□□□□ 0.94
SPCS3-203ENST00000507678 RHOXF1Q8NHV9 184 aa20.9■□□□□ 0.94
SPCS3-203ENST00000507678 TRUB1Q8WWH5 349 aaKnown RBP20.9■□□□□ 0.94
SPCS3-203ENST00000507678 LGALS12Q96DT0 336 aa20.9■□□□□ 0.94
SPCS3-203ENST00000507678 MTIF3Q9H2K0 278 aaKnown RBP20.9■□□□□ 0.94
SPCS3-203ENST00000507678 KCNK12Q9HB15 430 aa20.9■□□□□ 0.94
SPCS3-203ENST00000507678 ZBTB20Q9HC78 741 aaPredicted RBP20.9■□□□□ 0.94
SPCS3-203ENST00000507678 CTPS2Q9NRF8 586 aa20.9■□□□□ 0.94
SPCS3-203ENST00000507678 SIRT3Q9NTG7 399 aaPredicted RBP20.9■□□□□ 0.94
SPCS3-203ENST00000507678 MS4A12Q9NXJ0 267 aa20.9■□□□□ 0.94
SPCS3-203ENST00000507678 PSORS1C1Q9UIG5 152 aa20.9■□□□□ 0.94
SPCS3-203ENST00000507678 SLC31A1O15431 190 aa20.89■□□□□ 0.93
SPCS3-203ENST00000507678 C8orf89P0DMQ9 161 aa20.89■□□□□ 0.93
SPCS3-203ENST00000507678 NDUFAF5Q5TEU4 345 aa20.89■□□□□ 0.93
SPCS3-203ENST00000507678 SCAIQ8N9R8 606 aa20.89■□□□□ 0.93
SPCS3-203ENST00000507678 GPR32P1Q8NGA4 272 aa20.89■□□□□ 0.93
SPCS3-203ENST00000507678 PDXPQ96GD0 296 aa20.89■□□□□ 0.93
SPCS3-203ENST00000507678 CAMK1GQ96NX5 476 aa20.89■□□□□ 0.93
SPCS3-203ENST00000507678 TEX101Q9BY14 249 aa20.89■□□□□ 0.93
SPCS3-203ENST00000507678 FBXL12Q9NXK8 326 aa20.89■□□□□ 0.93
SPCS3-203ENST00000507678 RFXAPO00287 272 aa20.89■□□□□ 0.93
SPCS3-203ENST00000507678 HMGN4O00479 90 aa20.89■□□□□ 0.93
SPCS3-203ENST00000507678 SEMA3DO95025 777 aa20.89■□□□□ 0.93
SPCS3-203ENST00000507678 APODP05090 189 aa20.89■□□□□ 0.93
SPCS3-203ENST00000507678 DUSP6Q16828 381 aa20.89■□□□□ 0.93
SPCS3-203ENST00000507678 KLHL17Q6TDP4 642 aa20.89■□□□□ 0.93
SPCS3-203ENST00000507678 OR8K5Q8NH50 307 aa20.89■□□□□ 0.93
SPCS3-203ENST00000507678 IL4I1Q96RQ9 567 aa20.89■□□□□ 0.93
SPCS3-203ENST00000507678 MKRN2Q9H000 416 aaKnown RBP20.89■□□□□ 0.93
SPCS3-203ENST00000507678 GDE1Q9NZC3 331 aa20.89■□□□□ 0.93
SPCS3-203ENST00000507678 LOC100506127A0A0U1RQW1 187 aa20.88■□□□□ 0.93
SPCS3-203ENST00000507678 CLCA1A8K7I4 914 aa20.88■□□□□ 0.93
SPCS3-203ENST00000507678 EFCAB9A8MZ26 197 aa20.88■□□□□ 0.93
SPCS3-203ENST00000507678 LINC01565O15544 149 aa20.88■□□□□ 0.93
SPCS3-203ENST00000507678 NME6O75414 186 aaPredicted RBP20.88■□□□□ 0.93
SPCS3-203ENST00000507678 RHCEP18577 417 aa20.88■□□□□ 0.93
SPCS3-203ENST00000507678 CD72P21854 359 aa20.88■□□□□ 0.93
SPCS3-203ENST00000507678 CRISP3P54108 245 aa20.88■□□□□ 0.93
SPCS3-203ENST00000507678 TIGD6Q17RP2 521 aa20.88■□□□□ 0.93
SPCS3-203ENST00000507678 OR4C11Q6IEV9 310 aa20.88■□□□□ 0.93
SPCS3-203ENST00000507678 ZNF793Q6ZN11 406 aa20.88■□□□□ 0.93
SPCS3-203ENST00000507678 CACTIN-AS1Q8N1I8 211 aa20.88■□□□□ 0.93
SPCS3-203ENST00000507678 ZBED6CLQ96FA7 236 aaPredicted RBP20.88■□□□□ 0.93
SPCS3-203ENST00000507678 ITPAQ9BY32 194 aa20.88■□□□□ 0.93
SPCS3-203ENST00000507678 SERHL2Q9H4I8 314 aa20.88■□□□□ 0.93
SPCS3-203ENST00000507678 PHPT1Q9NRX4 125 aaPredicted RBP20.88■□□□□ 0.93
SPCS3-203ENST00000507678 AP1M2Q9Y6Q5 423 aa20.88■□□□□ 0.93
SPCS3-203ENST00000507678 CLDN25C9JDP6 229 aa20.88■□□□□ 0.93
SPCS3-203ENST00000507678 SEMA7AO75326 666 aa20.88■□□□□ 0.93
SPCS3-203ENST00000507678 TGFBR2P37173 567 aa20.88■□□□□ 0.93
SPCS3-203ENST00000507678 ST3GAL4Q11206 333 aa20.88■□□□□ 0.93
SPCS3-203ENST00000507678 SOWAHCQ53LP3 525 aaPredicted RBP20.88■□□□□ 0.93
SPCS3-203ENST00000507678 PARM1Q6UWI2 310 aa20.88■□□□□ 0.93
SPCS3-203ENST00000507678 RAB42Q8N4Z0 105 aa20.88■□□□□ 0.93
SPCS3-203ENST00000507678 TMEM145Q8NBT3 493 aa20.88■□□□□ 0.93
SPCS3-203ENST00000507678 OR2A1Q8NGT9 310 aa20.88■□□□□ 0.93
SPCS3-203ENST00000507678 FGF14Q92915 247 aa20.88■□□□□ 0.93
SPCS3-203ENST00000507678 ZHX1-C8orf76Q96EF9 292 aa20.88■□□□□ 0.93
SPCS3-203ENST00000507678 AICDAQ9GZX7 198 aa20.88■□□□□ 0.93
SPCS3-203ENST00000507678 SEC14L3Q9UDX4 400 aa20.88■□□□□ 0.93
SPCS3-203ENST00000507678 FBXW2Q9UKT8 454 aa20.88■□□□□ 0.93
SPCS3-203ENST00000507678 YBX2Q9Y2T7 364 aaKnown RBP20.88■□□□□ 0.93
SPCS3-203ENST00000507678 PMF1-BGLAPU3KQ54 211 aa20.88■□□□□ 0.93
SPCS3-203ENST00000507678 A0A1W2PQU0 124 aa20.87■□□□□ 0.93
SPCS3-203ENST00000507678 A0A1W2PS29 197 aa20.87■□□□□ 0.93
SPCS3-203ENST00000507678 ERI3O43414 337 aaKnown RBP20.87■□□□□ 0.93
SPCS3-203ENST00000507678 RAB15P59190 212 aa20.87■□□□□ 0.93
SPCS3-203ENST00000507678 DGUOKQ16854 277 aa20.87■□□□□ 0.93
SPCS3-203ENST00000507678 LACC1Q8IV20 430 aa20.87■□□□□ 0.93
SPCS3-203ENST00000507678 PCBD2Q9H0N5 130 aa20.87■□□□□ 0.93
SPCS3-203ENST00000507678 RSPH9Q9H1X1 276 aaPredicted RBP20.87■□□□□ 0.93
SPCS3-203ENST00000507678 ANKRA2Q9H9E1 313 aa20.87■□□□□ 0.93
SPCS3-203ENST00000507678 NEUROD4Q9HD90 331 aa20.87■□□□□ 0.93
SPCS3-203ENST00000507678 NECTIN3Q9NQS3 549 aa20.87■□□□□ 0.93
SPCS3-203ENST00000507678 ZCCHC3Q9NUD5 404 aaKnown RBP20.87■□□□□ 0.93
SPCS3-203ENST00000507678 TRBV23OR9-2A0A075B6M9 112 aa20.87■□□□□ 0.93
SPCS3-203ENST00000507678 OR10H3O60404 316 aa20.87■□□□□ 0.93
SPCS3-203ENST00000507678 CHMP24386 653 aa20.87■□□□□ 0.93
SPCS3-203ENST00000507678 CNR2P34972 360 aa20.87■□□□□ 0.93
SPCS3-203ENST00000507678 BCL6P41182 706 aa20.87■□□□□ 0.93
SPCS3-203ENST00000507678 NCBP2P52298 156 aaKnown RBP eCLIP20.87■□□□□ 0.93
SPCS3-203ENST00000507678 LBX1P52954 281 aa20.87■□□□□ 0.93
SPCS3-203ENST00000507678 PCBP4P57723 403 aaKnown RBP20.87■□□□□ 0.93
SPCS3-203ENST00000507678 PRDX1Q06830 199 aaKnown RBP20.87■□□□□ 0.93
SPCS3-203ENST00000507678 SEC23BQ15437 767 aa20.87■□□□□ 0.93
SPCS3-203ENST00000507678 RD3Q7Z3Z2 195 aa20.87■□□□□ 0.93
SPCS3-203ENST00000507678 OR4D11Q8NGI4 311 aa20.87■□□□□ 0.93
SPCS3-203ENST00000507678 OR52E1Q8NGJ3 308 aa20.87■□□□□ 0.93
SPCS3-203ENST00000507678 MYDGFQ969H8 173 aa20.87■□□□□ 0.93
SPCS3-203ENST00000507678 QRFPRQ96P65 431 aa20.87■□□□□ 0.93
SPCS3-203ENST00000507678 OR51I1Q9H343 314 aa20.87■□□□□ 0.93
SPCS3-203ENST00000507678 RNF167Q9H6Y7 350 aa20.87■□□□□ 0.93
SPCS3-203ENST00000507678 ACSL5Q9ULC5 683 aa20.87■□□□□ 0.93
SPCS3-203ENST00000507678 C4orf51C9J302 202 aa20.86■□□□□ 0.93
SPCS3-203ENST00000507678 MFN2O95140 757 aa20.86■□□□□ 0.93
SPCS3-203ENST00000507678 GADD45AP24522 165 aa20.86■□□□□ 0.93
SPCS3-203ENST00000507678 HSD17B2P37059 387 aa20.86■□□□□ 0.93
SPCS3-203ENST00000507678 RAB28P51157 221 aa20.86■□□□□ 0.93
SPCS3-203ENST00000507678 RAB8AP61006 207 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms