RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 RNF215Q9Y6U7 377 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 KIF7Q2M1P5 1343 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 FGD5Q6ZNL6 1462 aa2.82□□□□□ -1.96
LSM6-205ENST00000507449 IGLV4-3A0A075B6K6 122 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 IQCMA0A1B0GVH7 501 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 A0A1W2PPR1 153 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 YJEFN3A6XGL0 299 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 ADAM12O43184 909 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 FRAT2O75474 233 aaPredicted RBP2.81□□□□□ -1.96
LSM6-205ENST00000507449 IGHG3P01860 377 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 PGK2P07205 417 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 SERPINF2P08697 491 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 CCDC159P0C7I6 412 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 PCP11498 1178 aaKnown RBP2.81□□□□□ -1.96
LSM6-205ENST00000507449 ZNF18P17022 549 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 PTPN4P29074 926 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 MARCKSP29966 332 aaPredicted RBP2.81□□□□□ -1.96
LSM6-205ENST00000507449 AKT2P31751 481 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 SFNP31947 248 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 TRIM23P36406 574 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 ATP4BP51164 291 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 NDUFV3P56181 108 aaKnown RBP2.81□□□□□ -1.96
LSM6-205ENST00000507449 CCZ1BP86790 482 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 CCZ1P86791 482 aaPredicted RBP2.81□□□□□ -1.96
LSM6-205ENST00000507449 IL1RL1Q01638 556 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 WASHC5Q12768 1159 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 ENPP2Q13822 863 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 SIX1Q15475 284 aaPredicted RBP2.81□□□□□ -1.96
LSM6-205ENST00000507449 ZNF528Q3MIS6 628 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 GLIPR1L2Q4G1C9 344 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 LIPJQ5W064 366 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 CDC42EP5Q6NZY7 148 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 ZNF343Q6P1L6 599 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 ZCCHC12Q6PEW1 402 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 CNSTQ6PJW8 725 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 WDR88Q6ZMY6 472 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 BNIPLQ7Z465 357 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 ELMOD2Q8IZ81 293 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 BATF2Q8N1L9 274 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 GVQW1Q8N7I0 195 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 OR4F5Q8NH21 305 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 TCP11Q8WWU5 503 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 C16orf58Q96GQ5 468 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 COG3Q96JB2 828 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 RPGRIP1Q96KN7 1286 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 CAPNS2Q96L46 248 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 RUNDC3BQ96NL0 473 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 DCTN5Q9BTE1 182 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 LRRC61Q9BV99 259 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 DDX47Q9H0S4 455 aaKnown RBP2.81□□□□□ -1.96
LSM6-205ENST00000507449 LIME1Q9H400 295 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 DEPPQ9NTK1 212 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 ZNF446Q9NWS9 450 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 SPASTQ9UBP0 616 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 CTSZQ9UBR2 303 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 COPS7AQ9UBW8 275 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 KCNN3Q9UGI6 736 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 SALL1Q9NSC2 1324 aa2.81□□□□□ -1.96
LSM6-205ENST00000507449 ZMYM6O95789 1325 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 TRGV8A0A0C4DH27 118 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 A0A0J9YWU9 116 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 IGLON5A6NGN9 336 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 ASB14A6NK59 587 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 A8MXK9 166 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 NEDD8-MDP1E9PL57 170 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 EEF2KO00418 725 aaKnown RBP2.8□□□□□ -1.96
LSM6-205ENST00000507449 NTN3O00634 580 aaPredicted RBP2.8□□□□□ -1.96
LSM6-205ENST00000507449 PI15O43692 258 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 NME2P1O60361 137 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 HSF2BPO75031 334 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 SORBS2O94875 1100 aaKnown RBP2.8□□□□□ -1.96
LSM6-205ENST00000507449 GAS8-AS1O95177 125 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 IGHG1P01857 330 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 HCKP08631 526 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 TRIM49P0CI25 452 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 TRIM49CP0CI26 452 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 ADORA3P0DMS8 318 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 GAP43P17677 238 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 ZNF10P21506 573 aaPredicted RBP2.8□□□□□ -1.96
LSM6-205ENST00000507449 MAT2AP31153 395 aaKnown RBP2.8□□□□□ -1.96
LSM6-205ENST00000507449 RPL9P32969 192 aaKnown RBP2.8□□□□□ -1.96
LSM6-205ENST00000507449 GSK3BP49841 420 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 BPIFB3P59826 476 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 ELAVL2Q12926 359 aaKnown RBP2.8□□□□□ -1.96
LSM6-205ENST00000507449 KLF5Q13887 457 aaPredicted RBP2.8□□□□□ -1.96
LSM6-205ENST00000507449 CCL14Q16627 93 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 SNAI3Q3KNW1 292 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 POM121L1PQ3SYA9 428 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 WDR25Q64LD2 544 aaPredicted RBP2.8□□□□□ -1.96
LSM6-205ENST00000507449 RTL6Q6ICC9 239 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 OR6B2Q6IFH4 312 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 FAAP20Q6NZ36 180 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 MFSD7Q6UXD7 560 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 RPAINQ86UA6 219 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 LMNTD2Q8IXW0 634 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 ZNF440Q8IYI8 595 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 MRPL43Q8N983 215 aaKnown RBP2.8□□□□□ -1.96
LSM6-205ENST00000507449 OR1K1Q8NGR3 316 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 PCNPQ8WW12 178 aaKnown RBP2.8□□□□□ -1.96
LSM6-205ENST00000507449 MRPL38Q96DV4 380 aaKnown RBP2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms