RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 DGAT2Q96PD7 388 aa8.41□□□□□ -1.06
PDLIM5-209ENST00000506632 FRG2BQ96QU4 278 aa8.41□□□□□ -1.06
PDLIM5-209ENST00000506632 SERPINI1Q99574 410 aa8.41□□□□□ -1.06
PDLIM5-209ENST00000506632 TIMMDC1Q9NPL8 285 aa8.41□□□□□ -1.06
PDLIM5-209ENST00000506632 DEPPQ9NTK1 212 aa8.41□□□□□ -1.06
PDLIM5-209ENST00000506632 HPF1Q9NWY4 346 aa8.41□□□□□ -1.06
PDLIM5-209ENST00000506632 FETUBQ9UGM5 382 aa8.41□□□□□ -1.06
PDLIM5-209ENST00000506632 TINAGQ9UJW2 476 aa8.41□□□□□ -1.06
PDLIM5-209ENST00000506632 ZNF225Q9UK10 706 aa8.41□□□□□ -1.06
PDLIM5-209ENST00000506632 ADAM29Q9UKF5 820 aa8.41□□□□□ -1.06
PDLIM5-209ENST00000506632 PINLYPA6NC86 204 aa8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 HRKO00198 91 aa8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 WWP2O00308 870 aa8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 NADKO95544 446 aaPredicted RBP8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 OTCP00480 354 aa8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 CLPSP04118 112 aa8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 COX7A2P14406 83 aa8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 ALOX15P16050 662 aaPredicted RBP8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 TNNI3P19429 210 aa8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 GALNSP34059 522 aa8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 PTGER1P34995 402 aa8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 GPR85P60893 370 aa8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 HSF1Q00613 529 aa8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 ART3Q13508 389 aa8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 CMPK2Q5EBM0 449 aa8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 PIGGQ5H8A4 983 aa8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 SWT1Q5T5J6 900 aaKnown RBP8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 LGSNQ5TDP6 509 aa8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 LETMD1Q6P1Q0 360 aa8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 LYPD8Q6UX82 237 aa8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 IL20RBQ6UXL0 311 aa8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 RPTNQ6XPR3 784 aa8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 MILR1Q7Z6M3 343 aa8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 C9orf40Q8IXQ3 194 aa8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 SLC34A3Q8N130 599 aa8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 METTL4Q8N3J2 472 aa8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 GOLM1Q8NBJ4 401 aa8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 OR2M7Q8NG81 312 aa8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 OR5L2Q8NGL0 311 aa8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 MZB1Q8WU39 189 aa8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 UCN3Q969E3 161 aa8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 ATP6V1E2Q96A05 226 aa8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 PPWD1Q96BP3 646 aaKnown RBP8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 RBM18Q96H35 190 aaKnown RBP8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 ART5Q96L15 291 aa8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 SGCZQ96LD1 299 aa8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 PELOQ9BRX2 385 aaKnown RBP8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 MRPL1Q9BYD6 325 aaKnown RBP8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 SH2D2AQ9NP31 389 aa8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 SEMA4BQ9NPR2 832 aaPredicted RBP8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 TEX10Q9NXF1 929 aaPredicted RBP8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 TMEM216Q9P0N5 145 aa8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 SUCOQ9UBS9 1254 aaKnown RBP8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 COPS7AQ9UBW8 275 aa8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 ENTPD4Q9Y227 616 aa8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 KLF2Q9Y5W3 355 aaPredicted RBP8.4□□□□□ -1.06
PDLIM5-209ENST00000506632 ZNF407Q9C0G0 2248 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 A0A0G2JMM0 328 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 A0A1W2PPB8 328 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 A0A1W2PRS3 328 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 A0A1W2PS29 197 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 GLOD5A6NK44 160 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 KIR3DP1A8MWS1 328 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 ADAM10O14672 748 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 TFECO14948 347 aaPredicted RBP8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 PGRMC2O15173 223 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 HS6ST1O60243 411 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 DLX3O60479 287 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 GLSO94925 669 aaPredicted RBP8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 GBAP04062 536 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 RHOXF2BP0C7M4 288 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 SLC35E2P0CK97 266 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 AGAP20933 346 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 HSD17B3P37058 310 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 RFC3P40938 356 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 CASP6P55212 293 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 CDH13P55290 713 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 SLC37A1P57057 533 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 HERVK_113P63132 956 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 GALNT1Q10472 559 aaPredicted RBP8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 ASPHQ12797 758 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 SLC29A2Q14542 456 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 ZNF750Q32MQ0 723 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 ZNF791Q3KP31 576 aaPredicted RBP8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 UNC50Q53HI1 259 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 ZNF678Q5SXM1 525 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 FAM219BQ5XKK7 198 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 OR52E8Q6IFG1 317 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 OPN5Q6U736 354 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 CYP20A1Q6UW02 462 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 RTL4Q6ZR62 310 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 MRGPRGQ86SM5 289 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 DOLPP1Q86YN1 238 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 CNPY4Q8N129 248 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 SLC15A4Q8N697 577 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 ZNF441Q8N8Z8 693 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 EIF1ADQ8N9N8 165 aaKnown RBP8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 LRRN4CLQ8ND94 238 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 ACMSDQ8TDX5 336 aa8.39□□□□□ -1.07
PDLIM5-209ENST00000506632 TRPC4APQ8TEL6 797 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms