RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 RNASEH1O60930 286 aaKnown RBP3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 N4BP1O75113 896 aaKnown RBP3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 GLRA3O75311 464 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 SAP30O75446 220 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 TXNDC12O95881 172 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 APOHP02749 345 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 MT-ND2P03891 347 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 STAG3L2P0CL84 134 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 HSMCR30P0CW71 290 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 DARSP14868 501 aaKnown RBP3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 UQCRBP14927 111 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 GPD1P21695 349 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 FCARP24071 287 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 ACKR3P25106 362 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 CTNNA2P26232 953 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 CHMLP26374 656 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 EPHA2P29317 976 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 C21orf33P30042 268 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 CASP14P31944 242 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 MPLP40238 635 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 LBX1P52954 281 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 CDH11P55287 796 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 RAG2P55895 527 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 SLC8A3P57103 927 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 INHBEP58166 350 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 SELENOVP59797 346 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 PPIAP62937 165 aaKnown RBP3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 OTUD4Q01804 1114 aaKnown RBP3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 TAF10Q12962 218 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 MSLNQ13421 630 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 TGFBIQ15582 683 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 DUSP6Q16828 381 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 PARP6Q2NL67 630 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 ITPRIPL2Q3MIP1 535 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 HSP90AA4PQ58FG1 418 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 XKR7Q5GH72 579 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 XKR3Q5GH77 459 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 FGD3Q5JSP0 725 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 SPDYCQ5MJ68 293 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 CTSL3PQ5NE16 218 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 WASHC2DQ5SRD0 308 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 FNBP1LQ5T0N5 605 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 PLCXD3Q63HM9 321 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 ZNF776Q68DI1 518 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 PDPK2PQ6A1A2 396 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 DHRS11Q6UWP2 260 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 CCNI2Q6ZMN8 369 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 RFPL4BQ6ZWI9 263 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 UTS2BQ765I0 119 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 CCDC80Q76M96 950 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 Q7L0L9 218 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 ASRGL1Q7L266 308 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 CTU1Q7Z7A3 348 aaKnown RBP3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 VTCN1Q7Z7D3 282 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 SERINC5Q86VE9 423 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 COMTD1Q86VU5 262 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 RNF113BQ8IZP6 322 aaKnown RBP3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 ELMOD1Q8N336 334 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 PARP8Q8N3A8 854 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 CLIP4Q8N3C7 705 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 GPR137CQ8N3F9 429 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 BHLHE22Q8NFJ8 381 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 TSEN15Q8WW01 171 aaKnown RBP3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 EXTL1Q92935 676 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 C3orf30Q96M34 536 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 INPP4AQ96PE3 977 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 UHRF2Q96PU4 802 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 S1PR3Q99500 378 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 DNTTIP1Q9H147 329 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 RGCCQ9H4X1 137 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 C3orf14Q9HBI5 128 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 POLD4Q9HCU8 107 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 A4GALTQ9NPC4 353 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 GDF3Q9NR23 364 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 SLC38A7Q9NVC3 462 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 PTTG3PQ9NZH4 202 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 POLKQ9UBT6 870 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 PISDQ9UG56 409 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 SERGEFQ9UGK8 458 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 PITPNC1Q9UKF7 332 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 PACSIN3Q9UKS6 424 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 FZR1Q9UM11 496 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 ZNF175Q9Y473 711 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 BZW2Q9Y6E2 419 aaKnown RBP3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 ZMYM6O95789 1325 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 CARMIL1Q5VZK9 1371 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 CUX2O14529 1486 aa3.33□□□□□ -1.88
HMGB1P22-201ENST00000505315 PPIAL4CA0A0B4J2A2 164 aa3.32□□□□□ -1.88
HMGB1P22-201ENST00000505315 ATP6AP2A0A1C7CYW4 349 aa3.32□□□□□ -1.88
HMGB1P22-201ENST00000505315 OR6C74A6NCV1 312 aa3.32□□□□□ -1.88
HMGB1P22-201ENST00000505315 WASHC1A8K0Z3 465 aa3.32□□□□□ -1.88
HMGB1P22-201ENST00000505315 A8MVM7 634 aa3.32□□□□□ -1.88
HMGB1P22-201ENST00000505315 C9JVG2 144 aa3.32□□□□□ -1.88
HMGB1P22-201ENST00000505315 TEX46H3BTG2 121 aa3.32□□□□□ -1.88
HMGB1P22-201ENST00000505315 H3BTX0 84 aa3.32□□□□□ -1.88
HMGB1P22-201ENST00000505315 I6L893 689 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P22-201ENST00000505315 TULP2O00295 520 aa3.32□□□□□ -1.88
HMGB1P22-201ENST00000505315 PRRG2O14669 202 aa3.32□□□□□ -1.88
HMGB1P22-201ENST00000505315 LRATO95237 230 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms