RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 I6L893 689 aaPredicted RBP4.86□□□□□ -1.63
NIPBL-204ENST00000504430 J3QR06 171 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 ZSCAN12O43309 604 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 MSI1O43347 362 aaKnown RBP4.86□□□□□ -1.63
NIPBL-204ENST00000504430 TMPRSS11DO60235 418 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 ANXA4P09525 319 aaPredicted RBP4.86□□□□□ -1.63
NIPBL-204ENST00000504430 MATN1P21941 496 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 SSTR1P30872 391 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 SERPINB9P50453 376 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 TPD52L1Q16890 204 aaPredicted RBP4.86□□□□□ -1.63
NIPBL-204ENST00000504430 SEL1L3Q68CR1 1132 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 SFRP4Q6FHJ7 346 aaPredicted RBP4.86□□□□□ -1.63
NIPBL-204ENST00000504430 ZNF770Q6IQ21 691 aaPredicted RBP4.86□□□□□ -1.63
NIPBL-204ENST00000504430 MFSD12Q6NUT3 480 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 NIPAL3Q6P499 406 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 RHBDF2Q6PJF5 856 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 IRF2BP2Q7Z5L9 587 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 ZDHHC13Q8IUH4 622 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 B3GALNT2Q8NCR0 500 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 OR1J2Q8NGS2 313 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 UBTD2Q8WUN7 234 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 TMEM45BQ96B21 275 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 HARBI1Q96MB7 349 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 ABT1Q9ULW3 272 aaKnown RBP4.86□□□□□ -1.63
NIPBL-204ENST00000504430 PIGLQ9Y2B2 252 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 CGNL1Q0VF96 1302 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 A0A0J9YYE9 177 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 DBX1A6NMT0 343 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 SERPINE3A8MV23 424 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 FAM157AC9JC47 383 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 M0QXV9 152 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 SDC3O75056 442 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 ENTPD5O75356 428 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 OR2J3O76001 311 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 CIAO1O76071 339 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 SYNGR4O95473 234 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 SNAI1O95863 264 aaPredicted RBP4.85□□□□□ -1.63
NIPBL-204ENST00000504430 TRBC1P01850 177 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 PRF1P14222 555 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 CCNB1P14635 433 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 HOXA9P31269 272 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 CCR8P51685 355 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 DLK1P80370 383 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 SLC34A1Q06495 639 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 MSMPQ1L6U9 139 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 ZNF528Q3MIS6 628 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 LINC01620Q4KN68 170 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 SOWAHCQ53LP3 525 aaPredicted RBP4.85□□□□□ -1.63
NIPBL-204ENST00000504430 EPHA10Q5JZY3 1008 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 OR5M10Q6IEU7 315 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 ANKRD46Q86W74 232 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 GPSM1Q86YR5 675 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 PLD3Q8IV08 490 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 C4orf19Q8IY42 314 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 CCDC36Q8IYA8 594 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 CSNK1A1LQ8N752 337 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 LRRC75AQ8NAA5 344 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 HTR3CQ8WXA8 447 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 DNAAF4Q8WXU2 420 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 DEFB118Q96PH6 123 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 VPS35Q96QK1 796 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 DUSP16Q9BY84 665 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 PPP1R3EQ9H7J1 279 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 CATSPERBQ9H7T0 1116 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 SP140LQ9H930 580 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 C3orf18Q9UK00 162 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 ANKRD30AQ9BXX3 1397 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 ZMYM6O95789 1325 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 A0A1B0GUA9 196 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 C9JVG2 144 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 RS1O15537 224 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 MMP10P09238 476 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 ST6GAL1P15907 406 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 DUTP33316 252 aaKnown RBP4.85□□□□□ -1.63
NIPBL-204ENST00000504430 SPAM1P38567 509 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 ZNF84P51523 738 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 CXADRP78310 365 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 NAAAQ02083 359 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 MELKQ14680 651 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 PLEKHA7Q6IQ23 1121 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 SLC8B1Q6J4K2 584 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 TMPRSS11FQ6ZWK6 438 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 PAQR7Q86WK9 346 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 OR5M8Q8NGP6 311 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 DTD1Q8TEA8 209 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 ZNF775Q96BV0 537 aaPredicted RBP4.85□□□□□ -1.63
NIPBL-204ENST00000504430 COQ2Q96H96 371 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 CCDC28BQ9BUN5 200 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 C20orf24Q9BUV8 137 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 NEUROG2Q9H2A3 272 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 SMOXQ9NWM0 555 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 A0A1W2PQ67 120 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 MYADML2A6NDP7 307 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 F8VP50 259 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 OR10H2O60403 315 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 LDB3O75112 727 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 FARP2O94887 1054 aaPredicted RBP4.85□□□□□ -1.63
NIPBL-204ENST00000504430 CTSAP10619 480 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 CNR1P21554 472 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 HRH2P25021 359 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms