RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 FOXM1Q08050 763 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 GNA13Q14344 377 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 GRM3Q14832 879 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 INPP5JQ15735 1006 aaPredicted RBP4.29□□□□□ -1.72
MATR3-202ENST00000502422 PYCR3Q53H96 274 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 CLVS2Q5SYC1 327 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 ZNF385CQ66K41 422 aaPredicted RBP4.29□□□□□ -1.72
MATR3-202ENST00000502422 STEAP4Q687X5 459 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 TMEM65Q6PI78 240 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 NPNTQ6UXI9 565 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 FAM183BPQ6ZVS7 135 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 CYS1Q717R9 158 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 ENOSF1Q7L5Y1 443 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 ADCK1Q86TW2 530 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 AQP12AQ8IXF9 295 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 LINC00518Q8N0U6 118 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 TCAIMQ8N3R3 496 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 NKAPQ8N5F7 415 aaKnown RBP4.29□□□□□ -1.72
MATR3-202ENST00000502422 NIPA2Q8N8Q9 360 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 ANKRD53Q8N9V6 530 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 PLA2G15Q8NCC3 412 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 GLB1L3Q8NCI6 653 aaPredicted RBP4.29□□□□□ -1.72
MATR3-202ENST00000502422 TNRC6AQ8NDV7 1962 aaKnown RBP4.29□□□□□ -1.72
MATR3-202ENST00000502422 CHDHQ8NE62 594 aaPredicted RBP4.29□□□□□ -1.72
MATR3-202ENST00000502422 C7orf57Q8NEG2 295 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 SPATA3Q8NHX4 192 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 MAGEE2Q8TD90 523 aaPredicted RBP4.29□□□□□ -1.72
MATR3-202ENST00000502422 HDAC2Q92769 488 aaKnown RBP4.29□□□□□ -1.72
MATR3-202ENST00000502422 ISL2Q96A47 359 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 FAF2Q96CS3 445 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 CPXM1Q96SM3 734 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 SDHCQ99643 169 aaPredicted RBP4.29□□□□□ -1.72
MATR3-202ENST00000502422 EBNA1BP2Q99848 306 aaKnown RBP4.29□□□□□ -1.72
MATR3-202ENST00000502422 NUDT16L1Q9BRJ7 211 aaKnown RBP4.29□□□□□ -1.72
MATR3-202ENST00000502422 ULBP3Q9BZM4 244 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 ROGDIQ9GZN7 287 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 TWSG1Q9GZX9 223 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.29□□□□□ -1.72
MATR3-202ENST00000502422 WDR26Q9H7D7 661 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 APMAPQ9HDC9 416 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 SPAG4Q9NPE6 437 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 DTLQ9NZJ0 730 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 COQ3Q9NZJ6 369 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 TAAR2Q9P1P5 351 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 ACTR3BQ9P1U1 418 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 ZDHHC2Q9UIJ5 367 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 ERRFI1Q9UJM3 462 aaPredicted RBP4.29□□□□□ -1.72
MATR3-202ENST00000502422 AURKCQ9UQB9 309 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 SLC5A6Q9Y289 635 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 WBP11Q9Y2W2 641 aaKnown RBP4.29□□□□□ -1.72
MATR3-202ENST00000502422 RAP2CQ9Y3L5 183 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 TMEM184BQ9Y519 407 aaPredicted RBP4.29□□□□□ -1.72
MATR3-202ENST00000502422 PRRC2CQ9Y520 2896 aaKnown RBP4.29□□□□□ -1.72
MATR3-202ENST00000502422 AUP1Q9Y679 476 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 POLQO75417 2590 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 TCRBV5S2A0A599 114 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 CCDC78A2IDD5 438 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 FAM221AA4D161 298 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 WIPF3A6NGB9 483 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 METTL15A6NJ78 407 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 PCP4L1A6NKN8 68 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 ZNF99A8MXY4 864 aaPredicted RBP4.28□□□□□ -1.72
MATR3-202ENST00000502422 FAM25EA8MYX2 175 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 APOC4-APOC2K7ER74 178 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 M0R3G1 203 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 SDHDO14521 159 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 SGTAO43765 313 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 RAMP2O60895 175 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 LRCH4O75427 683 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 OR7A10O76100 309 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 RECQL5O94762 991 aaPredicted RBP4.28□□□□□ -1.72
MATR3-202ENST00000502422 LDLRP01130 860 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 PRLP01236 227 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 APOC2P02655 101 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 PF4P02776 101 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 ELFN1P0C7U0 828 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 NID1P14543 1247 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 ZNF250P15622 560 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 CAPN3P20807 821 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 F8A1P23610 371 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 KDELR1P24390 212 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 CCNCP24863 283 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 IL12AP29459 219 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 UGT2B10P36537 528 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 GNPDA1P46926 289 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 RPL14P50914 215 aaKnown RBP4.28□□□□□ -1.72
MATR3-202ENST00000502422 CCL11P51671 97 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 SLC7A2P52569 658 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 TPD52P55327 224 aaPredicted RBP4.28□□□□□ -1.72
MATR3-202ENST00000502422 HSD17B7P56937 341 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 GABARAPL2P60520 117 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 IL1RL1Q01638 556 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 SEMA5AQ13591 1074 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 PDK2Q15119 407 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 SMTNL2Q2TAL5 461 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 TBRG1Q3YBR2 411 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 MINDY4Q4G0A6 757 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 IGSF11Q5DX21 431 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 SAMD4BQ5PRF9 694 aaKnown RBP4.28□□□□□ -1.72
MATR3-202ENST00000502422 C6orf141Q5SZD1 244 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms