RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 ZNF175Q9Y473 711 aa12.46□□□□□ -0.42
GAPVD1-220ENST00000497580 ZAR1LA6NP61 321 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 RHCEP18577 417 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 CD79BP40259 229 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 EVX1P49640 407 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 GPR85P60893 370 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 IL10RBQ08334 325 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 ACSM2AQ08AH3 577 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 FGL2Q14314 439 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 GRIN2CQ14957 1233 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 DUSP6Q16828 381 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 ACSM2BQ68CK6 577 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 SPATA2LQ8IUW3 424 aaPredicted RBP12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 ADGRF3Q8IZF5 1079 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 STPG2Q8N412 459 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 PROKR2Q8NFJ6 384 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 ASZ1Q8WWH4 475 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 UFD1Q92890 307 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 MYEOVQ96EZ4 313 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 NARS2Q96I59 477 aaKnown RBP12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 C12orf57Q99622 126 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 PKMYT1Q99640 499 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 P2RY13Q9BPV8 354 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 THAP7Q9BT49 309 aaPredicted RBP12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 TTYH1Q9H313 450 aaPredicted RBP12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 ACER3Q9NUN7 267 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 NYNRINQ9P2P1 1898 aaKnown RBP12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 CYB5R1Q9UHQ9 305 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 PCDHGA9Q9Y5G4 932 aaKnown RBP12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 PHIPQ8WWQ0 1821 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 QSOX1O00391 747 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 CD3GP09693 182 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 FAM157BP0CG42 384 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 POU3F2P20265 443 aaPredicted RBP12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 PRPS1L1P21108 318 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 GPR15P49685 360 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 HJURPQ8NCD3 748 aaPredicted RBP12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 KIAA1143Q96AT1 154 aaPredicted RBP12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 LRR1Q96L50 414 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 ERMAPQ96PL5 475 aaPredicted RBP12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 DDOQ99489 341 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 PIP5K1AQ99755 562 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 IFT22Q9H7X7 185 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 KCTD5Q9NXV2 234 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 PRG3Q9Y2Y8 225 aaPredicted RBP12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 PRSS21Q9Y6M0 314 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 CNMDO75829 334 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 ALDOBP05062 364 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 ELK1P19419 428 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 LCN1P31025 176 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 PTGER3P43115 390 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 SERINC3Q13530 473 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 C6orf132Q5T0Z8 1188 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 ARMC12Q5T9G4 340 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 CPTPQ5TA50 214 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 SERPINA9Q86WD7 417 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 OR4C15Q8NGM1 316 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 OR6K2Q8NGY2 324 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 ELMOD3Q96FG2 381 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 ZC3HAV1LQ96H79 300 aaKnown RBP12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 SENP5Q96HI0 755 aaPredicted RBP12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 POLR2J3Q9H1A7 115 aaKnown RBP12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 SERHL2Q9H4I8 314 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 MRPL15Q9P015 296 aaKnown RBP12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 FTSJ1Q9UET6 329 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 TRPS1Q9UHF7 1281 aa12.45□□□□□ -0.42
GAPVD1-220ENST00000497580 SEPT4O43236 478 aa12.44□□□□□ -0.42
GAPVD1-220ENST00000497580 CBX7O95931 251 aa12.44□□□□□ -0.42
GAPVD1-220ENST00000497580 KCNE1P15382 129 aa12.44□□□□□ -0.42
GAPVD1-220ENST00000497580 BPIP17213 487 aa12.44□□□□□ -0.42
GAPVD1-220ENST00000497580 GJA1P17302 382 aa12.44□□□□□ -0.42
GAPVD1-220ENST00000497580 ZP3P21754 424 aa12.44□□□□□ -0.42
GAPVD1-220ENST00000497580 CHI3L1P36222 383 aaPredicted RBP12.44□□□□□ -0.42
GAPVD1-220ENST00000497580 ATP6V1E1P36543 226 aa12.44□□□□□ -0.42
GAPVD1-220ENST00000497580 VEZF1Q14119 521 aa12.44□□□□□ -0.42
GAPVD1-220ENST00000497580 HSD17B12Q53GQ0 312 aa12.44□□□□□ -0.42
GAPVD1-220ENST00000497580 RAET1GQ6H3X3 334 aa12.44□□□□□ -0.42
GAPVD1-220ENST00000497580 MZT2AQ6P582 158 aa12.44□□□□□ -0.42
GAPVD1-220ENST00000497580 LINGO4Q6UY18 593 aa12.44□□□□□ -0.42
GAPVD1-220ENST00000497580 LSRQ86X29 649 aaPredicted RBP12.44□□□□□ -0.42
GAPVD1-220ENST00000497580 LAS2Q8IYD9 372 aa12.44□□□□□ -0.42
GAPVD1-220ENST00000497580 LINC00469Q8N7U9 141 aa12.44□□□□□ -0.42
GAPVD1-220ENST00000497580 VPS37AQ8NEZ2 397 aa12.44□□□□□ -0.42
GAPVD1-220ENST00000497580 OR7G3Q8NG95 312 aa12.44□□□□□ -0.42
GAPVD1-220ENST00000497580 SLC6A18Q96N87 628 aa12.44□□□□□ -0.42
GAPVD1-220ENST00000497580 ARHGAP39Q9C0H5 1083 aa12.44□□□□□ -0.42
GAPVD1-220ENST00000497580 ASB8Q9H765 288 aa12.44□□□□□ -0.42
GAPVD1-220ENST00000497580 NMRK2Q9NPI5 230 aa12.44□□□□□ -0.42
GAPVD1-220ENST00000497580 SLCO1C1Q9NYB5 712 aa12.44□□□□□ -0.42
GAPVD1-220ENST00000497580 SRRDQ9UH36 339 aa12.44□□□□□ -0.42
GAPVD1-220ENST00000497580 ZFR2Q9UPR6 939 aaKnown RBP12.44□□□□□ -0.42
GAPVD1-220ENST00000497580 CCDC88CQ9P219 2028 aa12.44□□□□□ -0.42
GAPVD1-220ENST00000497580 ZNF236Q9UL36 1845 aa12.44□□□□□ -0.42
GAPVD1-220ENST00000497580 SLC22A23A1A5C7 686 aa12.44□□□□□ -0.42
GAPVD1-220ENST00000497580 PRR23D1E9PI22 279 aaPredicted RBP12.44□□□□□ -0.42
GAPVD1-220ENST00000497580 PITPNM1O00562 1244 aa12.44□□□□□ -0.42
GAPVD1-220ENST00000497580 KHNYNO15037 678 aaKnown RBP12.44□□□□□ -0.42
GAPVD1-220ENST00000497580 GCM2O75603 506 aaPredicted RBP12.44□□□□□ -0.42
GAPVD1-220ENST00000497580 IGLV3-25P01717 112 aa12.44□□□□□ -0.42
GAPVD1-220ENST00000497580 ANXA5P08758 320 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms