RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 TMEM151BQ8IW70 566 aa20.4■□□□□ 0.86
C9orf3-222ENST00000496567 CPSF7Q8N684 471 aaKnown RBP20.4■□□□□ 0.86
C9orf3-222ENST00000496567 OR7A2PQ8NGA2 310 aa20.4■□□□□ 0.86
C9orf3-222ENST00000496567 BCAS4Q8TDM0 211 aa20.4■□□□□ 0.86
C9orf3-222ENST00000496567 COQ8BQ96D53 544 aa20.4■□□□□ 0.86
C9orf3-222ENST00000496567 PELOQ9BRX2 385 aaKnown RBP20.4■□□□□ 0.86
C9orf3-222ENST00000496567 ZNF385DQ9H6B1 395 aa20.4■□□□□ 0.86
C9orf3-222ENST00000496567 CLDN16Q9Y5I7 305 aa20.4■□□□□ 0.86
C9orf3-222ENST00000496567 TMEM8BA6NDV4 472 aa20.39■□□□□ 0.85
C9orf3-222ENST00000496567 TGFBR3LH3BV60 316 aa20.39■□□□□ 0.85
C9orf3-222ENST00000496567 NDUFAB1O14561 156 aa20.39■□□□□ 0.85
C9orf3-222ENST00000496567 SLC35E2P0CK97 266 aa20.39■□□□□ 0.85
C9orf3-222ENST00000496567 PORP16435 677 aaPredicted RBP20.39■□□□□ 0.85
C9orf3-222ENST00000496567 NTSP30990 170 aa20.39■□□□□ 0.85
C9orf3-222ENST00000496567 PLIN5Q00G26 463 aa20.39■□□□□ 0.85
C9orf3-222ENST00000496567 ANKRD26P1Q6NSI1 321 aa20.39■□□□□ 0.85
C9orf3-222ENST00000496567 PAOXQ6QHF9 649 aa20.39■□□□□ 0.85
C9orf3-222ENST00000496567 ANKRD37Q7Z713 158 aa20.39■□□□□ 0.85
C9orf3-222ENST00000496567 ST13P4Q8IZP2 240 aaPredicted RBP20.39■□□□□ 0.85
C9orf3-222ENST00000496567 CNRIP1Q96F85 164 aaPredicted RBP20.39■□□□□ 0.85
C9orf3-222ENST00000496567 RBM18Q96H35 190 aaKnown RBP20.39■□□□□ 0.85
C9orf3-222ENST00000496567 TEX37Q96LM6 180 aa20.39■□□□□ 0.85
C9orf3-222ENST00000496567 IP6K3Q96PC2 410 aa20.39■□□□□ 0.85
C9orf3-222ENST00000496567 BBS4Q96RK4 519 aa20.39■□□□□ 0.85
C9orf3-222ENST00000496567 IFNA16P05015 189 aa20.38■□□□□ 0.85
C9orf3-222ENST00000496567 CPMP14384 443 aa20.38■□□□□ 0.85
C9orf3-222ENST00000496567 OTX2P32243 289 aa20.38■□□□□ 0.85
C9orf3-222ENST00000496567 MPIP34949 423 aa20.38■□□□□ 0.85
C9orf3-222ENST00000496567 FEN1P39748 380 aaKnown RBP20.38■□□□□ 0.85
C9orf3-222ENST00000496567 STT3AP46977 705 aa20.38■□□□□ 0.85
C9orf3-222ENST00000496567 OR4D2P58180 307 aa20.38■□□□□ 0.85
C9orf3-222ENST00000496567 CEBPEQ15744 281 aa20.38■□□□□ 0.85
C9orf3-222ENST00000496567 PGS1Q32NB8 556 aa20.38■□□□□ 0.85
C9orf3-222ENST00000496567 LRRC69Q6ZNQ3 347 aa20.38■□□□□ 0.85
C9orf3-222ENST00000496567 LANCL3Q6ZV70 420 aa20.38■□□□□ 0.85
C9orf3-222ENST00000496567 LRRC25Q8N386 305 aaPredicted RBP20.38■□□□□ 0.85
C9orf3-222ENST00000496567 OR8J2Q8NGG1 315 aa20.38■□□□□ 0.85
C9orf3-222ENST00000496567 ZNF681Q96N22 645 aa20.38■□□□□ 0.85
C9orf3-222ENST00000496567 DGAT2Q96PD7 388 aa20.38■□□□□ 0.85
C9orf3-222ENST00000496567 DUSP26Q9BV47 211 aa20.38■□□□□ 0.85
C9orf3-222ENST00000496567 BHLHE41Q9C0J9 482 aaPredicted RBP20.38■□□□□ 0.85
C9orf3-222ENST00000496567 SAR1AQ9NR31 198 aa20.38■□□□□ 0.85
C9orf3-222ENST00000496567 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.38■□□□□ 0.85
C9orf3-222ENST00000496567 HS3ST3B1Q9Y662 390 aa20.38■□□□□ 0.85
C9orf3-222ENST00000496567 FREM2Q5SZK8 3169 aa20.38■□□□□ 0.85
C9orf3-222ENST00000496567 ASPMQ8IZT6 3477 aa20.38■□□□□ 0.85
C9orf3-222ENST00000496567 CROCCQ5TZA2 2017 aa20.38■□□□□ 0.85
C9orf3-222ENST00000496567 LOC102723996A0A087X1L8 192 aa20.38■□□□□ 0.85
C9orf3-222ENST00000496567 PDPK1O15530 556 aa20.38■□□□□ 0.85
C9orf3-222ENST00000496567 OR10H2O60403 315 aa20.38■□□□□ 0.85
C9orf3-222ENST00000496567 LAMP1P11279 417 aa20.38■□□□□ 0.85
C9orf3-222ENST00000496567 IL12AP29459 219 aa20.38■□□□□ 0.85
C9orf3-222ENST00000496567 KIR3DL1P43629 444 aa20.38■□□□□ 0.85
C9orf3-222ENST00000496567 IL10RAQ13651 578 aa20.38■□□□□ 0.85
C9orf3-222ENST00000496567 ZNF385BQ569K4 471 aa20.38■□□□□ 0.85
C9orf3-222ENST00000496567 CPEB2Q7Z5Q1 589 aaKnown RBP20.38■□□□□ 0.85
C9orf3-222ENST00000496567 SPACA3Q8IXA5 215 aa20.38■□□□□ 0.85
C9orf3-222ENST00000496567 ANKS4BQ8N8V4 417 aa20.38■□□□□ 0.85
C9orf3-222ENST00000496567 CCDC197Q8NCU1 140 aa20.38■□□□□ 0.85
C9orf3-222ENST00000496567 NMUR2Q9GZQ4 415 aa20.38■□□□□ 0.85
C9orf3-222ENST00000496567 ADAP2Q9NPF8 381 aa20.38■□□□□ 0.85
C9orf3-222ENST00000496567 SSUH2Q9Y2M2 353 aa20.38■□□□□ 0.85
C9orf3-222ENST00000496567 MYOCOSA0A1B0GUC4 107 aa20.37■□□□□ 0.85
C9orf3-222ENST00000496567 FAM234BA2RU67 622 aa20.37■□□□□ 0.85
C9orf3-222ENST00000496567 ZNF891A8MT65 544 aaPredicted RBP20.37■□□□□ 0.85
C9orf3-222ENST00000496567 MYO1GB0I1T2 1018 aa20.37■□□□□ 0.85
C9orf3-222ENST00000496567 IL6P05231 212 aa20.37■□□□□ 0.85
C9orf3-222ENST00000496567 ADSLP30566 484 aaPredicted RBP20.37■□□□□ 0.85
C9orf3-222ENST00000496567 S100A3P33764 101 aa20.37■□□□□ 0.85
C9orf3-222ENST00000496567 GALNSP34059 522 aa20.37■□□□□ 0.85
C9orf3-222ENST00000496567 POLR2JP52435 117 aaKnown RBP20.37■□□□□ 0.85
C9orf3-222ENST00000496567 FOXK2Q01167 660 aa20.37■□□□□ 0.85
C9orf3-222ENST00000496567 SRSF6Q13247 344 aaKnown RBP20.37■□□□□ 0.85
C9orf3-222ENST00000496567 ELAVL1Q15717 326 aaKnown RBP20.37■□□□□ 0.85
C9orf3-222ENST00000496567 PRSS53Q2L4Q9 553 aa20.37■□□□□ 0.85
C9orf3-222ENST00000496567 FAM174BQ3ZCQ3 159 aa20.37■□□□□ 0.85
C9orf3-222ENST00000496567 CRTC2Q53ET0 693 aaPredicted RBP20.37■□□□□ 0.85
C9orf3-222ENST00000496567 AGKQ53H12 422 aa20.37■□□□□ 0.85
C9orf3-222ENST00000496567 SFT2D3Q587I9 215 aa20.37■□□□□ 0.85
C9orf3-222ENST00000496567 BROXQ5VW32 411 aa20.37■□□□□ 0.85
C9orf3-222ENST00000496567 FAM180BQ6P0A1 224 aa20.37■□□□□ 0.85
C9orf3-222ENST00000496567 PPP1R32Q7Z5V6 425 aa20.37■□□□□ 0.85
C9orf3-222ENST00000496567 MTDHQ86UE4 582 aaKnown RBP20.37■□□□□ 0.85
C9orf3-222ENST00000496567 ZSCAN1Q8NBB4 408 aa20.37■□□□□ 0.85
C9orf3-222ENST00000496567 VPS37AQ8NEZ2 397 aa20.37■□□□□ 0.85
C9orf3-222ENST00000496567 OR9I1Q8NGQ6 314 aa20.37■□□□□ 0.85
C9orf3-222ENST00000496567 ZCCHC14Q8WYQ9 949 aaKnown RBP20.37■□□□□ 0.85
C9orf3-222ENST00000496567 ZBED6CLQ96FA7 236 aaPredicted RBP20.37■□□□□ 0.85
C9orf3-222ENST00000496567 DCBLD2Q96PD2 775 aa20.37■□□□□ 0.85
C9orf3-222ENST00000496567 PNO1Q9NRX1 252 aaKnown RBP20.37■□□□□ 0.85
C9orf3-222ENST00000496567 CCDC167Q9P0B6 97 aa20.37■□□□□ 0.85
C9orf3-222ENST00000496567 FCHO1O14526 889 aa20.36■□□□□ 0.85
C9orf3-222ENST00000496567 SOCS6O14544 535 aa20.36■□□□□ 0.85
C9orf3-222ENST00000496567 DYRK3O43781 588 aa20.36■□□□□ 0.85
C9orf3-222ENST00000496567 ATP1B1P05026 303 aa20.36■□□□□ 0.85
C9orf3-222ENST00000496567 ZNF750Q32MQ0 723 aa20.36■□□□□ 0.85
C9orf3-222ENST00000496567 SPANXN4Q5MJ08 99 aa20.36■□□□□ 0.85
C9orf3-222ENST00000496567 ANXA8L1Q5VT79 327 aa20.36■□□□□ 0.85
C9orf3-222ENST00000496567 CPZQ66K79 652 aa20.36■□□□□ 0.85
C9orf3-222ENST00000496567 PROSER1Q86XN7 944 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms