RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 OR4F6Q8NGB9 312 aa14.58□□□□□ -0.08
HDAC4-213ENST00000496347 ITLN2Q8WWU7 325 aaPredicted RBP14.58□□□□□ -0.08
HDAC4-213ENST00000496347 SGCZQ96LD1 299 aa14.58□□□□□ -0.08
HDAC4-213ENST00000496347 RHOXF2Q9BQY4 288 aa14.58□□□□□ -0.08
HDAC4-213ENST00000496347 BRF2Q9HAW0 419 aa14.58□□□□□ -0.08
HDAC4-213ENST00000496347 AHSPQ9NZD4 102 aa14.58□□□□□ -0.08
HDAC4-213ENST00000496347 TRPS1Q9UHF7 1281 aa14.58□□□□□ -0.08
HDAC4-213ENST00000496347 TINAGQ9UJW2 476 aa14.58□□□□□ -0.08
HDAC4-213ENST00000496347 SNX6Q9UNH7 406 aa14.58□□□□□ -0.08
HDAC4-213ENST00000496347 CACNA1DQ01668 2161 aa14.58□□□□□ -0.08
HDAC4-213ENST00000496347 PKDREJQ9NTG1 2253 aa14.57□□□□□ -0.08
HDAC4-213ENST00000496347 EXPH5Q8NEV8 1989 aa14.57□□□□□ -0.08
HDAC4-213ENST00000496347 MYOCOSA0A1B0GUC4 107 aa14.57□□□□□ -0.08
HDAC4-213ENST00000496347 A0A1W2PR48 441 aa14.57□□□□□ -0.08
HDAC4-213ENST00000496347 ARHGAP10A1A4S6 786 aa14.57□□□□□ -0.08
HDAC4-213ENST00000496347 PRKRAO75569 313 aaKnown RBP14.57□□□□□ -0.08
HDAC4-213ENST00000496347 ABOP16442 354 aa14.57□□□□□ -0.08
HDAC4-213ENST00000496347 GALNSP34059 522 aa14.57□□□□□ -0.08
HDAC4-213ENST00000496347 C3AR1Q16581 482 aa14.57□□□□□ -0.08
HDAC4-213ENST00000496347 LETMD1Q6P1Q0 360 aa14.57□□□□□ -0.08
HDAC4-213ENST00000496347 OPN5Q6U736 354 aa14.57□□□□□ -0.08
HDAC4-213ENST00000496347 C16orf47Q6ZP98 133 aaPredicted RBP14.57□□□□□ -0.08
HDAC4-213ENST00000496347 GK5Q6ZS86 529 aa14.57□□□□□ -0.08
HDAC4-213ENST00000496347 MILR1Q7Z6M3 343 aa14.57□□□□□ -0.08
HDAC4-213ENST00000496347 OR4N5Q8IXE1 308 aa14.57□□□□□ -0.08
HDAC4-213ENST00000496347 C9orf40Q8IXQ3 194 aa14.57□□□□□ -0.08
HDAC4-213ENST00000496347 DND1Q8IYX4 353 aaKnown RBP14.57□□□□□ -0.08
HDAC4-213ENST00000496347 SLC34A3Q8N130 599 aa14.57□□□□□ -0.08
HDAC4-213ENST00000496347 EID3Q8N140 333 aa14.57□□□□□ -0.08
HDAC4-213ENST00000496347 C16orf52Q8NHV5 167 aa14.57□□□□□ -0.08
HDAC4-213ENST00000496347 SLC22A8Q8TCC7 542 aa14.57□□□□□ -0.08
HDAC4-213ENST00000496347 SENP5Q96HI0 755 aaPredicted RBP14.57□□□□□ -0.08
HDAC4-213ENST00000496347 ZNF382Q96SR6 550 aa14.57□□□□□ -0.08
HDAC4-213ENST00000496347 SH3BGRL2Q9UJC5 107 aa14.57□□□□□ -0.08
HDAC4-213ENST00000496347 STK38LQ9Y2H1 464 aa14.57□□□□□ -0.08
HDAC4-213ENST00000496347 KLF2Q9Y5W3 355 aaPredicted RBP14.57□□□□□ -0.08
HDAC4-213ENST00000496347 EML6Q6ZMW3 1958 aa14.56□□□□□ -0.08
HDAC4-213ENST00000496347 OR6C76A6NM76 312 aa14.56□□□□□ -0.08
HDAC4-213ENST00000496347 ACOT7O00154 380 aa14.56□□□□□ -0.08
HDAC4-213ENST00000496347 GSTA1P08263 222 aa14.56□□□□□ -0.08
HDAC4-213ENST00000496347 HSD3B1P14060 373 aa14.56□□□□□ -0.08
HDAC4-213ENST00000496347 AGAP20933 346 aa14.56□□□□□ -0.08
HDAC4-213ENST00000496347 HSD3B2P26439 372 aa14.56□□□□□ -0.08
HDAC4-213ENST00000496347 GPR85P60893 370 aa14.56□□□□□ -0.08
HDAC4-213ENST00000496347 ART3Q13508 389 aa14.56□□□□□ -0.08
HDAC4-213ENST00000496347 RASA2Q15283 850 aa14.56□□□□□ -0.08
HDAC4-213ENST00000496347 RGS9BPQ6ZS82 235 aa14.56□□□□□ -0.08
HDAC4-213ENST00000496347 SLC22A9Q8IVM8 553 aa14.56□□□□□ -0.08
HDAC4-213ENST00000496347 CHERPQ8IWX8 916 aaKnown RBP14.56□□□□□ -0.08
HDAC4-213ENST00000496347 RIT1Q92963 219 aa14.56□□□□□ -0.08
HDAC4-213ENST00000496347 TMEM237Q96Q45 408 aa14.56□□□□□ -0.08
HDAC4-213ENST00000496347 CNPPD1Q9BV87 410 aa14.56□□□□□ -0.08
HDAC4-213ENST00000496347 EPB41L4BQ9H329 900 aa14.56□□□□□ -0.08
HDAC4-213ENST00000496347 LIN28AQ9H9Z2 209 aaKnown RBP14.56□□□□□ -0.08
HDAC4-213ENST00000496347 PPCSQ9HAB8 311 aa14.56□□□□□ -0.08
HDAC4-213ENST00000496347 ENTPD4Q9Y227 616 aa14.56□□□□□ -0.08
HDAC4-213ENST00000496347 APCP25054 2843 aa14.56□□□□□ -0.08
HDAC4-213ENST00000496347 GLOD5A6NK44 160 aa14.55□□□□□ -0.08
HDAC4-213ENST00000496347 PRRG2O14669 202 aa14.55□□□□□ -0.08
HDAC4-213ENST00000496347 GUCY1B2O75343 617 aa14.55□□□□□ -0.08
HDAC4-213ENST00000496347 WISP2O76076 250 aa14.55□□□□□ -0.08
HDAC4-213ENST00000496347 FAM153BP0C7A2 387 aa14.55□□□□□ -0.08
HDAC4-213ENST00000496347 SLC35E2P0CK97 266 aa14.55□□□□□ -0.08
HDAC4-213ENST00000496347 ATP5F1P24539 256 aaPredicted RBP14.55□□□□□ -0.08
HDAC4-213ENST00000496347 PTGER1P34995 402 aa14.55□□□□□ -0.08
HDAC4-213ENST00000496347 MAPK12P53778 367 aa14.55□□□□□ -0.08
HDAC4-213ENST00000496347 ERVK-8P63133 956 aa14.55□□□□□ -0.08
HDAC4-213ENST00000496347 CLCQ05315 142 aa14.55□□□□□ -0.08
HDAC4-213ENST00000496347 TBL3Q12788 808 aaKnown RBP14.55□□□□□ -0.08
HDAC4-213ENST00000496347 SLC29A2Q14542 456 aa14.55□□□□□ -0.08
HDAC4-213ENST00000496347 FAM153CQ494X1 144 aa14.55□□□□□ -0.08
HDAC4-213ENST00000496347 CMPK2Q5EBM0 449 aa14.55□□□□□ -0.08
HDAC4-213ENST00000496347 NDUFAF5Q5TEU4 345 aa14.55□□□□□ -0.08
HDAC4-213ENST00000496347 IL20RBQ6UXL0 311 aa14.55□□□□□ -0.08
HDAC4-213ENST00000496347 RNF111Q6ZNA4 994 aa14.55□□□□□ -0.08
HDAC4-213ENST00000496347 SLC29A4Q7RTT9 530 aa14.55□□□□□ -0.08
HDAC4-213ENST00000496347 COMMD6Q7Z4G1 85 aa14.55□□□□□ -0.08
HDAC4-213ENST00000496347 GSPT2Q8IYD1 628 aaKnown RBP14.55□□□□□ -0.08
HDAC4-213ENST00000496347 METTL4Q8N3J2 472 aa14.55□□□□□ -0.08
HDAC4-213ENST00000496347 SLC15A4Q8N697 577 aa14.55□□□□□ -0.08
HDAC4-213ENST00000496347 OR2M7Q8NG81 312 aa14.55□□□□□ -0.08
HDAC4-213ENST00000496347 PHF10Q8WUB8 498 aaKnown RBP14.55□□□□□ -0.08
HDAC4-213ENST00000496347 SELENOMQ8WWX9 145 aa14.55□□□□□ -0.08
HDAC4-213ENST00000496347 FAM173AQ9BQD7 235 aa14.55□□□□□ -0.08
HDAC4-213ENST00000496347 MRPL1Q9BYD6 325 aaKnown RBP14.55□□□□□ -0.08
HDAC4-213ENST00000496347 PLSCR2Q9NRY7 297 aa14.55□□□□□ -0.08
HDAC4-213ENST00000496347 DEPPQ9NTK1 212 aa14.55□□□□□ -0.08
HDAC4-213ENST00000496347 NMRK1Q9NWW6 199 aa14.55□□□□□ -0.08
HDAC4-213ENST00000496347 TEX10Q9NXF1 929 aaPredicted RBP14.55□□□□□ -0.08
HDAC4-213ENST00000496347 TMEM216Q9P0N5 145 aa14.55□□□□□ -0.08
HDAC4-213ENST00000496347 SLC12A4Q9UP95 1085 aa14.55□□□□□ -0.08
HDAC4-213ENST00000496347 ERVK-19Q9WJR5 959 aa14.55□□□□□ -0.08
HDAC4-213ENST00000496347 MEMO1Q9Y316 297 aa14.55□□□□□ -0.08
HDAC4-213ENST00000496347 CREBBPQ92793 2442 aa14.55□□□□□ -0.08
HDAC4-213ENST00000496347 A0A1B0GTL3 188 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 HS6ST1O60243 411 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 KRT6AP02538 564 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 GBAP04062 536 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 KRT6BP04259 564 aa14.54□□□□□ -0.08
HDAC4-213ENST00000496347 KLK1P06870 262 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms