RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 LIM2P55344 173 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 SEC13P55735 322 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 SMIM11AP58511 58 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 FBXO43Q4G163 708 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 DCST1Q5T197 706 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 SDE2Q6IQ49 451 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 KLHL17Q6TDP4 642 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 KRT73Q86Y46 540 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 SRFBP1Q8NEF9 429 aaKnown RBP10.49□□□□□ -0.73
CMSS1-208ENST00000496116 COL21A1Q96P44 957 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 BBS4Q96RK4 519 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 TRMT61BQ9BVS5 477 aaKnown RBP10.49□□□□□ -0.73
CMSS1-208ENST00000496116 GLIPR2Q9H4G4 154 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 AMBNQ9NP70 447 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 SEMA3GQ9NS98 782 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 ZCCHC3Q9NUD5 404 aaKnown RBP10.49□□□□□ -0.73
CMSS1-208ENST00000496116 ZNF226Q9NYT6 803 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 HEBP2Q9Y5Z4 205 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 DOCK8Q8NF50 2099 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 CHD9Q3L8U1 2897 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 OR52A4PA6NMU1 304 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 ZAR1LA6NP61 321 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 EFCAB9A8MZ26 197 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 FAAHO00519 579 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 FFAR1O14842 300 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 AXIN1O15169 862 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 MAGEB3O15480 346 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 RNGTTO60942 597 aaKnown RBP10.49□□□□□ -0.73
CMSS1-208ENST00000496116 NADKO95544 446 aaPredicted RBP10.49□□□□□ -0.73
CMSS1-208ENST00000496116 H1F0P07305 194 aaKnown RBP10.49□□□□□ -0.73
CMSS1-208ENST00000496116 OR12D1P0DN82 309 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 TGFBR2P37173 567 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 BCL6P41182 706 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 KCNJ5P48544 419 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 CLK1P49759 484 aaKnown RBP10.49□□□□□ -0.73
CMSS1-208ENST00000496116 KHKP50053 298 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 CRISP3P54108 245 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 OLR1P78380 273 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 GNA13Q14344 377 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 TIGD6Q17RP2 521 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 RGS21Q2M5E4 152 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 C9orf50Q5SZB4 431 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 FRMPD2BQ6IN97 320 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 ZNF770Q6IQ21 691 aaPredicted RBP10.49□□□□□ -0.73
CMSS1-208ENST00000496116 ZNF793Q6ZN11 406 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 GPR32P1Q8NGA4 272 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 C9orf43Q8TAL5 461 aaPredicted RBP10.49□□□□□ -0.73
CMSS1-208ENST00000496116 DYNC2LI1Q8TCX1 351 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 XAGE5Q8WWM1 108 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 ZHX1-C8orf76Q96EF9 292 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 COX4I2Q96KJ9 171 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 AMDHD1Q96NU7 426 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 APOOQ9BUR5 198 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 SPATA5L1Q9BVQ7 753 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 OR51I1Q9H343 314 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 CLN6Q9NWW5 311 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 MGAT4BQ9UQ53 548 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 ERGIC3Q9Y282 383 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 YBX2Q9Y2T7 364 aaKnown RBP10.49□□□□□ -0.73
CMSS1-208ENST00000496116 CORINQ9Y5Q5 1042 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 COLEC10Q9Y6Z7 277 aa10.49□□□□□ -0.73
CMSS1-208ENST00000496116 TBC1D3DA0A087WVF3 549 aa10.48□□□□□ -0.73
CMSS1-208ENST00000496116 TBC1D3IA0A087WXS9 549 aa10.48□□□□□ -0.73
CMSS1-208ENST00000496116 TBC1D3EA0A087X179 549 aa10.48□□□□□ -0.73
CMSS1-208ENST00000496116 TBC1D3KA0A087X1G2 549 aa10.48□□□□□ -0.73
CMSS1-208ENST00000496116 TBC1D3FA6NER0 549 aaPredicted RBP10.48□□□□□ -0.73
CMSS1-208ENST00000496116 EFCAB10A6NFE3 127 aa10.48□□□□□ -0.73
CMSS1-208ENST00000496116 TBC1D3LB9A6J9 549 aa10.48□□□□□ -0.73
CMSS1-208ENST00000496116 MAN2B1O00754 1011 aa10.48□□□□□ -0.73
CMSS1-208ENST00000496116 ERI3O43414 337 aaKnown RBP10.48□□□□□ -0.73
CMSS1-208ENST00000496116 OR10H3O60404 316 aa10.48□□□□□ -0.73
CMSS1-208ENST00000496116 B4GALT2O60909 372 aa10.48□□□□□ -0.73
CMSS1-208ENST00000496116 TBC1D3HP0C7X1 549 aa10.48□□□□□ -0.73
CMSS1-208ENST00000496116 NR2F1P10589 423 aa10.48□□□□□ -0.73
CMSS1-208ENST00000496116 HIST1H1TP22492 207 aaPredicted RBP10.48□□□□□ -0.73
CMSS1-208ENST00000496116 CHMP24386 653 aa10.48□□□□□ -0.73
CMSS1-208ENST00000496116 ALDH4A1P30038 563 aa10.48□□□□□ -0.73
CMSS1-208ENST00000496116 CMPK1P30085 196 aa10.48□□□□□ -0.73
CMSS1-208ENST00000496116 IGFALSP35858 605 aa10.48□□□□□ -0.73
CMSS1-208ENST00000496116 SLC19A1P41440 591 aa10.48□□□□□ -0.73
CMSS1-208ENST00000496116 KIR2DL1P43626 348 aaPredicted RBP10.48□□□□□ -0.73
CMSS1-208ENST00000496116 TSFMP43897 325 aaKnown RBP10.48□□□□□ -0.73
CMSS1-208ENST00000496116 NUDT6P53370 316 aa10.48□□□□□ -0.73
CMSS1-208ENST00000496116 NCS1P62166 190 aa10.48□□□□□ -0.73
CMSS1-208ENST00000496116 TUBA1BP68363 451 aa10.48□□□□□ -0.73
CMSS1-208ENST00000496116 SLAMF1Q13291 335 aa10.48□□□□□ -0.73
CMSS1-208ENST00000496116 ZIC1Q15915 447 aa10.48□□□□□ -0.73
CMSS1-208ENST00000496116 ATAT1Q5SQI0 421 aa10.48□□□□□ -0.73
CMSS1-208ENST00000496116 TBC1D3GQ6DHY5 549 aa10.48□□□□□ -0.73
CMSS1-208ENST00000496116 TBC1D3CQ6IPX1 549 aa10.48□□□□□ -0.73
CMSS1-208ENST00000496116 TCTN3Q6NUS6 607 aa10.48□□□□□ -0.73
CMSS1-208ENST00000496116 PARM1Q6UWI2 310 aa10.48□□□□□ -0.73
CMSS1-208ENST00000496116 TMEM64Q6YI46 380 aa10.48□□□□□ -0.73
CMSS1-208ENST00000496116 DEF8Q6ZN54 512 aa10.48□□□□□ -0.73
CMSS1-208ENST00000496116 PTCHD4Q6ZW05 846 aa10.48□□□□□ -0.73
CMSS1-208ENST00000496116 TUBA1AQ71U36 451 aa10.48□□□□□ -0.73
CMSS1-208ENST00000496116 TBC1D3Q8IZP1 549 aaPredicted RBP10.48□□□□□ -0.73
CMSS1-208ENST00000496116 AMER3Q8N944 861 aa10.48□□□□□ -0.73
CMSS1-208ENST00000496116 FAM46DQ8NEK8 389 aa10.48□□□□□ -0.73
CMSS1-208ENST00000496116 OR2L3Q8NG85 312 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms