RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 PCDHGB3Q9Y5G1 929 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 A0A0J9YY10 115 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 LOC100130705A0A1B0GUX0 176 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 LRIT2A6NDA9 550 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 A8MVJ9 347 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 TNFRSF11BO00300 401 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 RTCAO00442 366 aaKnown RBP6.56□□□□□ -1.36
USP39-219ENST00000496047 VILLO15195 856 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 ZSCAN9O15535 394 aaPredicted RBP6.56□□□□□ -1.36
USP39-219ENST00000496047 B3GALT2O43825 422 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 MAN1A2O60476 641 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 TNFRSF21O75509 655 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 JRKO75564 520 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 ERAL1O75616 437 aaKnown RBP6.56□□□□□ -1.36
USP39-219ENST00000496047 DNAJB5O75953 348 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 SLITRK5O94991 958 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 BCHEP06276 602 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 ASGR2P07307 311 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 FHP07954 510 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 THEGLP0DJG4 465 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 CPN2P22792 545 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 AK4P27144 223 aaPredicted RBP6.56□□□□□ -1.36
USP39-219ENST00000496047 AQP1P29972 269 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 RRM2P31350 389 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 FRKP42685 505 aaPredicted RBP6.56□□□□□ -1.36
USP39-219ENST00000496047 CCT3P49368 545 aaKnown RBP6.56□□□□□ -1.36
USP39-219ENST00000496047 PPM1FP49593 454 aaPredicted RBP6.56□□□□□ -1.36
USP39-219ENST00000496047 MAPK10P53779 464 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 CRISP3P54108 245 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 CSNK2BP67870 215 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 IL5RAQ01344 420 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 SLAMF1Q13291 335 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 KCNAB2Q13303 367 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 DYNC1I2Q13409 638 aaKnown RBP6.56□□□□□ -1.36
USP39-219ENST00000496047 ELOCQ15369 112 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 ZIC1Q15915 447 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.56□□□□□ -1.36
USP39-219ENST00000496047 C11orf91Q3C1V1 193 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 ADPRMQ3LIE5 342 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 ZIK1Q3SY52 487 aaPredicted RBP6.56□□□□□ -1.36
USP39-219ENST00000496047 C4orf17Q53FE4 359 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 CRB2Q5IJ48 1285 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 MANEAQ5SRI9 462 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 ZNF425Q6IV72 752 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 ABHD17CQ6PCB6 329 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 B3GNT6Q6ZMB0 384 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 USP51Q70EK9 711 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 PRICKLE2Q7Z3G6 844 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 TAF8Q7Z7C8 310 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 ABI3BPQ7Z7G0 1075 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 SATL1Q86VE3 508 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 PAQR7Q86WK9 346 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 GKN2Q86XP6 184 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 ALDH16A1Q8IZ83 802 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 OFCC1Q8IZS5 231 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 NAGSQ8N159 534 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 SVOPQ8N4V2 548 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 LINC00471Q8N535 108 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 FAM86B1Q8N7N1 296 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 FLCNQ8NFG4 579 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 OR10G6Q8NH81 332 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 RNF217Q8TC41 542 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 CREB3L4Q8TEY5 395 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 GIPC3Q8TF64 312 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 RSC1A1Q92681 617 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 FKBP10Q96AY3 582 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 MS4A6EQ96DS6 147 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 FBXL20Q96IG2 436 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 TEFMQ96QE5 360 aaKnown RBP6.56□□□□□ -1.36
USP39-219ENST00000496047 SERINC2Q96SA4 455 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 ZFYVE21Q9BQ24 234 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 DPH2Q9BQC3 489 aaPredicted RBP6.56□□□□□ -1.36
USP39-219ENST00000496047 TUBA1CQ9BQE3 449 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.56□□□□□ -1.36
USP39-219ENST00000496047 CHST8Q9H2A9 424 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 RIBC2Q9H4K1 309 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 TIMMDC1Q9NPL8 285 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 ZCCHC3Q9NUD5 404 aaKnown RBP6.56□□□□□ -1.36
USP39-219ENST00000496047 FAM118AQ9NWS6 357 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 TAS2R7Q9NYW3 318 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 ACTR10Q9NZ32 417 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 TRPC4Q9UBN4 977 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 SEC14L3Q9UDX4 400 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 TBC1D29Q9UFV1 150 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 RSL24D1Q9UHA3 163 aaKnown RBP6.56□□□□□ -1.36
USP39-219ENST00000496047 FBXW2Q9UKT8 454 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 ACSL6Q9UKU0 697 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 TMCC3Q9ULS5 477 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 SLC9A8Q9Y2E8 581 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 BTBD3Q9Y2F9 522 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 POFUT2Q9Y2G5 429 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 GMPPBQ9Y5P6 360 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 ATRXP46100 2492 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 EPG5Q9HCE0 2579 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 SPAG17Q6Q759 2223 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 CACNA1IQ9P0X4 2223 aa6.56□□□□□ -1.36
USP39-219ENST00000496047 A0A1W2PPC4 97 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 OR2A25A4D2G3 310 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 OR6C74A6NCV1 312 aa6.55□□□□□ -1.36
USP39-219ENST00000496047 ARRDC5A6NEK1 342 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms