RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 TSPAN10Q9H1Z9 355 aaPredicted RBP22.46■■□□□ 1.19
HLA-C-209ENST00000495835 BRF2Q9HAW0 419 aa22.46■■□□□ 1.19
HLA-C-209ENST00000495835 SEMA4BQ9NPR2 832 aaPredicted RBP22.46■■□□□ 1.19
HLA-C-209ENST00000495835 ENTPD4Q9Y227 616 aa22.46■■□□□ 1.19
HLA-C-209ENST00000495835 ITPR2Q14571 2701 aa22.46■■□□□ 1.19
HLA-C-209ENST00000495835 A0A1W2PR48 441 aa22.45■■□□□ 1.18
HLA-C-209ENST00000495835 A8MT66 165 aa22.45■■□□□ 1.18
HLA-C-209ENST00000495835 OR6B1O95007 311 aa22.45■■□□□ 1.18
HLA-C-209ENST00000495835 SLC35E2P0CK97 266 aa22.45■■□□□ 1.18
HLA-C-209ENST00000495835 ABOP16442 354 aa22.45■■□□□ 1.18
HLA-C-209ENST00000495835 SOX3P41225 446 aa22.45■■□□□ 1.18
HLA-C-209ENST00000495835 TBL3Q12788 808 aaKnown RBP22.45■■□□□ 1.18
HLA-C-209ENST00000495835 RTL4Q6ZR62 310 aa22.45■■□□□ 1.18
HLA-C-209ENST00000495835 MRGPRGQ86SM5 289 aa22.45■■□□□ 1.18
HLA-C-209ENST00000495835 DND1Q8IYX4 353 aaKnown RBP22.45■■□□□ 1.18
HLA-C-209ENST00000495835 MTFMTQ96DP5 389 aaKnown RBP22.45■■□□□ 1.18
HLA-C-209ENST00000495835 TXLNGYQ9BZA5 131 aa22.45■■□□□ 1.18
HLA-C-209ENST00000495835 ELOVL6Q9H5J4 265 aa22.45■■□□□ 1.18
HLA-C-209ENST00000495835 LIN28AQ9H9Z2 209 aaKnown RBP22.45■■□□□ 1.18
HLA-C-209ENST00000495835 NMRK1Q9NWW6 199 aa22.45■■□□□ 1.18
HLA-C-209ENST00000495835 SNX6Q9UNH7 406 aa22.45■■□□□ 1.18
HLA-C-209ENST00000495835 OR6C76A6NM76 312 aa22.44■■□□□ 1.18
HLA-C-209ENST00000495835 PRRG2O14669 202 aa22.44■■□□□ 1.18
HLA-C-209ENST00000495835 GUCY1B2O75343 617 aa22.44■■□□□ 1.18
HLA-C-209ENST00000495835 SMSP52788 366 aa22.44■■□□□ 1.18
HLA-C-209ENST00000495835 HERVK_113P63132 956 aa22.44■■□□□ 1.18
HLA-C-209ENST00000495835 OR52E8Q6IFG1 317 aa22.44■■□□□ 1.18
HLA-C-209ENST00000495835 PAOXQ6QHF9 649 aa22.44■■□□□ 1.18
HLA-C-209ENST00000495835 C16orf47Q6ZP98 133 aaPredicted RBP22.44■■□□□ 1.18
HLA-C-209ENST00000495835 CHERPQ8IWX8 916 aaKnown RBP22.44■■□□□ 1.18
HLA-C-209ENST00000495835 METTL4Q8N3J2 472 aa22.44■■□□□ 1.18
HLA-C-209ENST00000495835 PPWD1Q96BP3 646 aaKnown RBP22.44■■□□□ 1.18
HLA-C-209ENST00000495835 ERVK-6Q9BXR3 956 aa22.44■■□□□ 1.18
HLA-C-209ENST00000495835 PLSCR2Q9NRY7 297 aa22.44■■□□□ 1.18
HLA-C-209ENST00000495835 TRPS1Q9UHF7 1281 aa22.44■■□□□ 1.18
HLA-C-209ENST00000495835 NCOA6Q14686 2063 aaPredicted RBP22.43■■□□□ 1.18
HLA-C-209ENST00000495835 OR10H2O60403 315 aa22.43■■□□□ 1.18
HLA-C-209ENST00000495835 GSTA1P08263 222 aa22.43■■□□□ 1.18
HLA-C-209ENST00000495835 CNR1P21554 472 aa22.43■■□□□ 1.18
HLA-C-209ENST00000495835 SLC29A2Q14542 456 aa22.43■■□□□ 1.18
HLA-C-209ENST00000495835 ZNF787Q6DD87 383 aa22.43■■□□□ 1.18
HLA-C-209ENST00000495835 OR2M7Q8NG81 312 aa22.43■■□□□ 1.18
HLA-C-209ENST00000495835 SLC22A8Q8TCC7 542 aa22.43■■□□□ 1.18
HLA-C-209ENST00000495835 PHF10Q8WUB8 498 aaKnown RBP22.43■■□□□ 1.18
HLA-C-209ENST00000495835 RIT1Q92963 219 aa22.43■■□□□ 1.18
HLA-C-209ENST00000495835 FAM173AQ9BQD7 235 aa22.43■■□□□ 1.18
HLA-C-209ENST00000495835 PSMC3IPQ9P2W1 217 aaPredicted RBP22.43■■□□□ 1.18
HLA-C-209ENST00000495835 TINAGQ9UJW2 476 aa22.43■■□□□ 1.18
HLA-C-209ENST00000495835 STK38LQ9Y2H1 464 aa22.43■■□□□ 1.18
HLA-C-209ENST00000495835 MEMO1Q9Y316 297 aa22.43■■□□□ 1.18
HLA-C-209ENST00000495835 ARHGAP10A1A4S6 786 aa22.42■■□□□ 1.18
HLA-C-209ENST00000495835 E9PLN8 166 aa22.42■■□□□ 1.18
HLA-C-209ENST00000495835 AIFM1O95831 613 aa22.42■■□□□ 1.18
HLA-C-209ENST00000495835 RHOXF2BP0C7M4 288 aa22.42■■□□□ 1.18
HLA-C-209ENST00000495835 HSD17B3P37058 310 aa22.42■■□□□ 1.18
HLA-C-209ENST00000495835 CLCQ05315 142 aa22.42■■□□□ 1.18
HLA-C-209ENST00000495835 CMPK2Q5EBM0 449 aa22.42■■□□□ 1.18
HLA-C-209ENST00000495835 NDUFAF5Q5TEU4 345 aa22.42■■□□□ 1.18
HLA-C-209ENST00000495835 SP5Q6BEB4 398 aaPredicted RBP22.42■■□□□ 1.18
HLA-C-209ENST00000495835 GK5Q6ZS86 529 aa22.42■■□□□ 1.18
HLA-C-209ENST00000495835 SLC29A4Q7RTT9 530 aa22.42■■□□□ 1.18
HLA-C-209ENST00000495835 SLC22A9Q8IVM8 553 aa22.42■■□□□ 1.18
HLA-C-209ENST00000495835 C9orf40Q8IXQ3 194 aa22.42■■□□□ 1.18
HLA-C-209ENST00000495835 VKORC1Q9BQB6 163 aa22.42■■□□□ 1.18
HLA-C-209ENST00000495835 RHOXF2Q9BQY4 288 aa22.42■■□□□ 1.18
HLA-C-209ENST00000495835 SACM1LQ9NTJ5 587 aa22.42■■□□□ 1.18
HLA-C-209ENST00000495835 DEPPQ9NTK1 212 aa22.42■■□□□ 1.18
HLA-C-209ENST00000495835 TMEM216Q9P0N5 145 aa22.42■■□□□ 1.18
HLA-C-209ENST00000495835 SH3BGRL2Q9UJC5 107 aa22.42■■□□□ 1.18
HLA-C-209ENST00000495835 NOTCH2Q04721 2471 aa22.42■■□□□ 1.18
HLA-C-209ENST00000495835 CACNA1DQ01668 2161 aa22.41■■□□□ 1.18
HLA-C-209ENST00000495835 ACOT7O00154 380 aa22.41■■□□□ 1.18
HLA-C-209ENST00000495835 HNRNPRO43390 633 aaKnown RBP22.41■■□□□ 1.18
HLA-C-209ENST00000495835 HS6ST1O60243 411 aa22.41■■□□□ 1.18
HLA-C-209ENST00000495835 HSD3B1P14060 373 aa22.41■■□□□ 1.18
HLA-C-209ENST00000495835 IMPDH1P20839 514 aa22.41■■□□□ 1.18
HLA-C-209ENST00000495835 HSD3B2P26439 372 aa22.41■■□□□ 1.18
HLA-C-209ENST00000495835 PIK3R1P27986 724 aa22.41■■□□□ 1.18
HLA-C-209ENST00000495835 PTGS2P35354 604 aa22.41■■□□□ 1.18
HLA-C-209ENST00000495835 GPR85P60893 370 aa22.41■■□□□ 1.18
HLA-C-209ENST00000495835 ZNF678Q5SXM1 525 aa22.41■■□□□ 1.18
HLA-C-209ENST00000495835 TEX35Q5T0J7 233 aa22.41■■□□□ 1.18
HLA-C-209ENST00000495835 CCNYL2Q5T2Q4 361 aa22.41■■□□□ 1.18
HLA-C-209ENST00000495835 LETMD1Q6P1Q0 360 aa22.41■■□□□ 1.18
HLA-C-209ENST00000495835 ARHGAP11AQ6P4F7 1023 aa22.41■■□□□ 1.18
HLA-C-209ENST00000495835 DGAT2L6Q6ZPD8 337 aa22.41■■□□□ 1.18
HLA-C-209ENST00000495835 SLC22A16Q86VW1 577 aa22.41■■□□□ 1.18
HLA-C-209ENST00000495835 DOLPP1Q86YN1 238 aa22.41■■□□□ 1.18
HLA-C-209ENST00000495835 OR4K14Q8NGD5 310 aa22.41■■□□□ 1.18
HLA-C-209ENST00000495835 SELENOMQ8WWX9 145 aa22.41■■□□□ 1.18
HLA-C-209ENST00000495835 RUBCNLQ9H714 662 aa22.41■■□□□ 1.18
HLA-C-209ENST00000495835 CHST11Q9NPF2 352 aa22.41■■□□□ 1.18
HLA-C-209ENST00000495835 DCDC2Q9UHG0 476 aa22.41■■□□□ 1.18
HLA-C-209ENST00000495835 GLOD5A6NK44 160 aa22.4■■□□□ 1.18
HLA-C-209ENST00000495835 PRSS44E7EML9 344 aa22.4■■□□□ 1.18
HLA-C-209ENST00000495835 PRKRAO75569 313 aaKnown RBP22.4■■□□□ 1.18
HLA-C-209ENST00000495835 P04436 131 aa22.4■■□□□ 1.18
HLA-C-209ENST00000495835 KLK1P06870 262 aa22.4■■□□□ 1.18
HLA-C-209ENST00000495835 FAM153BP0C7A2 387 aa22.4■■□□□ 1.18
HLA-C-209ENST00000495835 ATP5F1P24539 256 aaPredicted RBP22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms