RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 HORMAD2Q8N7B1 307 aa14.85□□□□□ -0.03
LIME1-209ENST00000494776 OR4K14Q8NGD5 310 aa14.85□□□□□ -0.03
LIME1-209ENST00000494776 SLC2A12Q8TD20 617 aa14.85□□□□□ -0.03
LIME1-209ENST00000494776 UCN3Q969E3 161 aa14.85□□□□□ -0.03
LIME1-209ENST00000494776 TM4SF18Q96CE8 201 aa14.85□□□□□ -0.03
LIME1-209ENST00000494776 SNRNP40Q96DI7 357 aaKnown RBP14.85□□□□□ -0.03
LIME1-209ENST00000494776 PGM2Q96G03 612 aa14.85□□□□□ -0.03
LIME1-209ENST00000494776 APIPQ96GX9 242 aa14.85□□□□□ -0.03
LIME1-209ENST00000494776 ART5Q96L15 291 aa14.85□□□□□ -0.03
LIME1-209ENST00000494776 NPAS2Q99743 824 aa14.85□□□□□ -0.03
LIME1-209ENST00000494776 SSU72Q9NP77 194 aaKnown RBP14.85□□□□□ -0.03
LIME1-209ENST00000494776 PSME2Q9UL46 239 aa14.85□□□□□ -0.03
LIME1-209ENST00000494776 VPS4AQ9UN37 437 aa14.85□□□□□ -0.03
LIME1-209ENST00000494776 PPIEQ9UNP9 301 aaKnown RBP14.85□□□□□ -0.03
LIME1-209ENST00000494776 WDR91A4D1P6 747 aa14.84□□□□□ -0.03
LIME1-209ENST00000494776 TM9SF1O15321 606 aa14.84□□□□□ -0.03
LIME1-209ENST00000494776 ZIC2O95409 532 aaPredicted RBP14.84□□□□□ -0.03
LIME1-209ENST00000494776 BPGMP07738 259 aa14.84□□□□□ -0.03
LIME1-209ENST00000494776 NEFHP12036 1026 aa14.84□□□□□ -0.03
LIME1-209ENST00000494776 CD96P40200 585 aa14.84□□□□□ -0.03
LIME1-209ENST00000494776 GPR143P51810 404 aa14.84□□□□□ -0.03
LIME1-209ENST00000494776 ARL13AQ5H913 290 aaPredicted RBP14.84□□□□□ -0.03
LIME1-209ENST00000494776 C6orf163Q5TEZ5 329 aa14.84□□□□□ -0.03
LIME1-209ENST00000494776 HOMEZQ8IX15 550 aa14.84□□□□□ -0.03
LIME1-209ENST00000494776 TMEM156Q8N614 296 aa14.84□□□□□ -0.03
LIME1-209ENST00000494776 RIT1Q92963 219 aa14.84□□□□□ -0.03
LIME1-209ENST00000494776 MIB2Q96AX9 1013 aa14.84□□□□□ -0.03
LIME1-209ENST00000494776 C19orf60Q96EN9 201 aa14.84□□□□□ -0.03
LIME1-209ENST00000494776 CNPPD1Q9BV87 410 aa14.84□□□□□ -0.03
LIME1-209ENST00000494776 TNFRSF12AQ9NP84 129 aa14.84□□□□□ -0.03
LIME1-209ENST00000494776 AGPAT4Q9NRZ5 378 aa14.84□□□□□ -0.03
LIME1-209ENST00000494776 ASF1BQ9NVP2 202 aa14.84□□□□□ -0.03
LIME1-209ENST00000494776 ZNF223Q9UK11 482 aaPredicted RBP14.84□□□□□ -0.03
LIME1-209ENST00000494776 PCDHA9Q9Y5H5 950 aa14.84□□□□□ -0.03
LIME1-209ENST00000494776 ACTL7BQ9Y614 415 aa14.84□□□□□ -0.03
LIME1-209ENST00000494776 FLNBO75369 2602 aaKnown RBP14.83□□□□□ -0.03
LIME1-209ENST00000494776 SLC28A1O00337 649 aa14.83□□□□□ -0.04
LIME1-209ENST00000494776 RGS14O43566 566 aa14.83□□□□□ -0.04
LIME1-209ENST00000494776 PRAMEF2O60811 474 aa14.83□□□□□ -0.04
LIME1-209ENST00000494776 ERAL1O75616 437 aaKnown RBP14.83□□□□□ -0.04
LIME1-209ENST00000494776 ZWINTO95229 277 aa14.83□□□□□ -0.04
LIME1-209ENST00000494776 DDAH2O95865 285 aa14.83□□□□□ -0.04
LIME1-209ENST00000494776 CHRNGP07510 517 aa14.83□□□□□ -0.04
LIME1-209ENST00000494776 SLC35E2P0CK97 266 aa14.83□□□□□ -0.04
LIME1-209ENST00000494776 CD46P15529 392 aa14.83□□□□□ -0.04
LIME1-209ENST00000494776 TIA1P31483 386 aaKnown RBP eCLIP14.83□□□□□ -0.04
LIME1-209ENST00000494776 SERPINB4P48594 390 aa14.83□□□□□ -0.04
LIME1-209ENST00000494776 CYB561P49447 251 aa14.83□□□□□ -0.04
LIME1-209ENST00000494776 XKP51811 444 aa14.83□□□□□ -0.04
LIME1-209ENST00000494776 ZNF267Q14586 743 aaPredicted RBP14.83□□□□□ -0.04
LIME1-209ENST00000494776 OR1C1Q15619 314 aa14.83□□□□□ -0.04
LIME1-209ENST00000494776 ZNF766Q5HY98 468 aa14.83□□□□□ -0.04
LIME1-209ENST00000494776 SPINK14Q6IE38 97 aa14.83□□□□□ -0.04
LIME1-209ENST00000494776 FAM180AQ6UWF9 173 aa14.83□□□□□ -0.04
LIME1-209ENST00000494776 TRIM46Q7Z4K8 759 aa14.83□□□□□ -0.04
LIME1-209ENST00000494776 ZNF321PQ8N8H1 164 aa14.83□□□□□ -0.04
LIME1-209ENST00000494776 OR5L2Q8NGL0 311 aa14.83□□□□□ -0.04
LIME1-209ENST00000494776 CDC26Q8NHZ8 85 aa14.83□□□□□ -0.04
LIME1-209ENST00000494776 AGR3Q8TD06 166 aa14.83□□□□□ -0.04
LIME1-209ENST00000494776 DOK4Q8TEW6 326 aa14.83□□□□□ -0.04
LIME1-209ENST00000494776 KLHL29Q96CT2 875 aa14.83□□□□□ -0.04
LIME1-209ENST00000494776 SENP5Q96HI0 755 aaPredicted RBP14.83□□□□□ -0.04
LIME1-209ENST00000494776 C5orf34Q96MH7 638 aa14.83□□□□□ -0.04
LIME1-209ENST00000494776 EBPLQ9BY08 206 aa14.83□□□□□ -0.04
LIME1-209ENST00000494776 PFDN4Q9NQP4 134 aa14.83□□□□□ -0.04
LIME1-209ENST00000494776 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.83□□□□□ -0.04
LIME1-209ENST00000494776 LRFN1Q9P244 771 aa14.83□□□□□ -0.04
LIME1-209ENST00000494776 DLGAP4Q9Y2H0 992 aa14.83□□□□□ -0.04
LIME1-209ENST00000494776 ZNF780BQ9Y6R6 833 aa14.83□□□□□ -0.04
LIME1-209ENST00000494776 CDK2AP1O14519 115 aa14.82□□□□□ -0.04
LIME1-209ENST00000494776 PRKNO60260 465 aaPredicted RBP14.82□□□□□ -0.04
LIME1-209ENST00000494776 SEC22BO75396 215 aa14.82□□□□□ -0.04
LIME1-209ENST00000494776 ITGA10O75578 1167 aa14.82□□□□□ -0.04
LIME1-209ENST00000494776 RSL1D1O76021 490 aaKnown RBP14.82□□□□□ -0.04
LIME1-209ENST00000494776 IL3P08700 152 aa14.82□□□□□ -0.04
LIME1-209ENST00000494776 ANXA4P09525 319 aaPredicted RBP14.82□□□□□ -0.04
LIME1-209ENST00000494776 PORP16435 677 aaPredicted RBP14.82□□□□□ -0.04
LIME1-209ENST00000494776 NT5EP21589 574 aa14.82□□□□□ -0.04
LIME1-209ENST00000494776 SERPINB5P36952 375 aa14.82□□□□□ -0.04
LIME1-209ENST00000494776 ETV4P43268 484 aa14.82□□□□□ -0.04
LIME1-209ENST00000494776 ERVK-8P63133 956 aa14.82□□□□□ -0.04
LIME1-209ENST00000494776 RAE1P78406 368 aaKnown RBP14.82□□□□□ -0.04
LIME1-209ENST00000494776 SH2D4BQ5SQS7 431 aa14.82□□□□□ -0.04
LIME1-209ENST00000494776 KANK2Q63ZY3 851 aa14.82□□□□□ -0.04
LIME1-209ENST00000494776 RPUSD3Q6P087 351 aaKnown RBP14.82□□□□□ -0.04
LIME1-209ENST00000494776 SLC48A1Q6P1K1 146 aa14.82□□□□□ -0.04
LIME1-209ENST00000494776 DGAT2L6Q6ZPD8 337 aa14.82□□□□□ -0.04
LIME1-209ENST00000494776 DDIASQ8IXT1 998 aa14.82□□□□□ -0.04
LIME1-209ENST00000494776 CLYBLQ8N0X4 340 aa14.82□□□□□ -0.04
LIME1-209ENST00000494776 MMP21Q8N119 569 aa14.82□□□□□ -0.04
LIME1-209ENST00000494776 ZNF721Q8TF20 911 aa14.82□□□□□ -0.04
LIME1-209ENST00000494776 C16orf78Q8WTQ4 265 aa14.82□□□□□ -0.04
LIME1-209ENST00000494776 TMEM125Q96AQ2 219 aa14.82□□□□□ -0.04
LIME1-209ENST00000494776 FBXL20Q96IG2 436 aa14.82□□□□□ -0.04
LIME1-209ENST00000494776 PKNOX2Q96KN3 472 aa14.82□□□□□ -0.04
LIME1-209ENST00000494776 SIGLEC12Q96PQ1 595 aa14.82□□□□□ -0.04
LIME1-209ENST00000494776 PAIP2Q9BPZ3 127 aaKnown RBP14.82□□□□□ -0.04
LIME1-209ENST00000494776 LIN28AQ9H9Z2 209 aaKnown RBP14.82□□□□□ -0.04
LIME1-209ENST00000494776 KLHL1Q9NR64 748 aa14.82□□□□□ -0.04
LIME1-209ENST00000494776 ERVK-19Q9WJR5 959 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms