RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 TGM3Q08188 693 aa10.03□□□□□ -0.8
PRPF4B-209ENST00000494674 TP53BP2Q13625 1128 aa10.03□□□□□ -0.8
PRPF4B-209ENST00000494674 GPR19Q15760 415 aa10.03□□□□□ -0.8
PRPF4B-209ENST00000494674 SPDYE7PQ495Y7 208 aa10.03□□□□□ -0.8
PRPF4B-209ENST00000494674 LAIR2Q6ISS4 152 aa10.03□□□□□ -0.8
PRPF4B-209ENST00000494674 ZNF438Q7Z4V0 828 aa10.03□□□□□ -0.8
PRPF4B-209ENST00000494674 DEFB119Q8N690 84 aa10.03□□□□□ -0.8
PRPF4B-209ENST00000494674 GPR32P1Q8NGA4 272 aa10.03□□□□□ -0.8
PRPF4B-209ENST00000494674 FAM174AQ8TBP5 190 aa10.03□□□□□ -0.8
PRPF4B-209ENST00000494674 SPPL2AQ8TCT8 520 aa10.03□□□□□ -0.8
PRPF4B-209ENST00000494674 SFXN5Q8TD22 340 aa10.03□□□□□ -0.8
PRPF4B-209ENST00000494674 RSC1A1Q92681 617 aa10.03□□□□□ -0.8
PRPF4B-209ENST00000494674 THAP11Q96EK4 314 aa10.03□□□□□ -0.8
PRPF4B-209ENST00000494674 TMEM19Q96HH6 336 aa10.03□□□□□ -0.8
PRPF4B-209ENST00000494674 ZNF300Q96RE9 604 aaPredicted RBP10.03□□□□□ -0.8
PRPF4B-209ENST00000494674 REEP1Q9H902 201 aa10.03□□□□□ -0.8
PRPF4B-209ENST00000494674 THUMPD1Q9NXG2 353 aaKnown RBP10.03□□□□□ -0.8
PRPF4B-209ENST00000494674 WNT16Q9UBV4 365 aa10.03□□□□□ -0.8
PRPF4B-209ENST00000494674 C3orf18Q9UK00 162 aa10.03□□□□□ -0.8
PRPF4B-209ENST00000494674 MRPS17Q9Y2R5 130 aaKnown RBP10.03□□□□□ -0.8
PRPF4B-209ENST00000494674 LYVE1Q9Y5Y7 322 aa10.03□□□□□ -0.8
PRPF4B-209ENST00000494674 A0A0J9YY10 115 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 OR5K3A6NET4 321 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 H0YGG7 62 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 HCRTR1O43613 425 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 NDUFS2O75306 463 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 ERAL1O75616 437 aaKnown RBP10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 BMP10O95393 424 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 C9P02748 559 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 BCHEP06276 602 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 NR2F6P10588 404 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 ALPPL2P10696 532 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 NME1P15531 152 aaKnown RBP10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 FUT4P22083 530 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 ELK4P28324 431 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 RRM2P31350 389 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 XCR1P46094 333 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 OR1E2P47887 323 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 ARF3P61204 181 aaPredicted RBP10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 TNFRSF17Q02223 184 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 FUT5Q11128 374 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 RUNX2Q13950 521 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 PUM1Q14671 1186 aaKnown RBP eCLIP10.02□□□□□ -0.89e-6■■□□□ 13.5
PRPF4B-209ENST00000494674 CTU2Q2VPK5 515 aaKnown RBP10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 RFX4Q33E94 735 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 CYP27C1Q4G0S4 372 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 TTC23Q5W5X9 447 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 ZNF605Q86T29 641 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 ARMC8Q8IUR7 673 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 SHISA5Q8N114 240 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 SMYD1Q8NB12 490 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 PIK3C3Q8NEB9 887 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 C1orf216Q8TAB5 229 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 ZCCHC10Q8TBK6 192 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 ADAMTS16Q8TE57 1224 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 ZDHHC1Q8WTX9 485 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 FBLIM1Q8WUP2 373 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 GEMIN6Q8WXD5 167 aaKnown RBP10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 SLC35G5Q96KT7 338 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 BBS4Q96RK4 519 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 ZFYVE21Q9BQ24 234 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 YIPF3Q9GZM5 350 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 PCED1AQ9H1Q7 454 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 OR51I1Q9H343 314 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 ZCCHC3Q9NUD5 404 aaKnown RBP10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 HRASLS2Q9NWW9 162 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 TUBA8Q9NY65 449 aaPredicted RBP10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 PDP1Q9P0J1 537 aaPredicted RBP10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 POMT2Q9UKY4 750 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 BAG5Q9UL15 447 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 RAB23Q9ULC3 237 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 PCDHGA8Q9Y5G5 932 aa10.02□□□□□ -0.8
PRPF4B-209ENST00000494674 COL6A3P12111 3177 aa10.02□□□□□ -0.81
PRPF4B-209ENST00000494674 CACNA1IQ9P0X4 2223 aa10.02□□□□□ -0.81
PRPF4B-209ENST00000494674 B4DGG1 531 aa10.02□□□□□ -0.81
PRPF4B-209ENST00000494674 MFN2O95140 757 aa10.02□□□□□ -0.81
PRPF4B-209ENST00000494674 CSF2P04141 144 aa10.02□□□□□ -0.81
PRPF4B-209ENST00000494674 C8orf89P0DMQ9 161 aa10.02□□□□□ -0.81
PRPF4B-209ENST00000494674 CTSEP14091 401 aa10.02□□□□□ -0.81
PRPF4B-209ENST00000494674 PAX7P23759 505 aa10.02□□□□□ -0.81
PRPF4B-209ENST00000494674 FEN1P39748 380 aaKnown RBP10.02□□□□□ -0.81
PRPF4B-209ENST00000494674 LIMS1P48059 325 aa10.02□□□□□ -0.81
PRPF4B-209ENST00000494674 BLKP51451 505 aa10.02□□□□□ -0.81
PRPF4B-209ENST00000494674 ISL1P61371 349 aa10.02□□□□□ -0.81
PRPF4B-209ENST00000494674 HHEXQ03014 270 aa10.02□□□□□ -0.81
PRPF4B-209ENST00000494674 DUSP7Q16829 419 aa10.02□□□□□ -0.81
PRPF4B-209ENST00000494674 CNPY1Q3B7I2 92 aa10.02□□□□□ -0.81
PRPF4B-209ENST00000494674 DEFB134Q4QY38 66 aa10.02□□□□□ -0.81
PRPF4B-209ENST00000494674 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.02□□□□□ -0.81
PRPF4B-209ENST00000494674 ZNF691Q5VV52 312 aa10.02□□□□□ -0.81
PRPF4B-209ENST00000494674 GPR153Q6NV75 609 aa10.02□□□□□ -0.81
PRPF4B-209ENST00000494674 Q7L0L9 218 aa10.02□□□□□ -0.81
PRPF4B-209ENST00000494674 THAP5Q7Z6K1 395 aa10.02□□□□□ -0.81
PRPF4B-209ENST00000494674 CCDC116Q8IYX3 515 aa10.02□□□□□ -0.81
PRPF4B-209ENST00000494674 CHDHQ8NE62 594 aaPredicted RBP10.02□□□□□ -0.81
PRPF4B-209ENST00000494674 FAM46DQ8NEK8 389 aa10.02□□□□□ -0.81
PRPF4B-209ENST00000494674 CADM4Q8NFZ8 388 aa10.02□□□□□ -0.81
PRPF4B-209ENST00000494674 OR5D16Q8NGK9 328 aa10.02□□□□□ -0.81
PRPF4B-209ENST00000494674 MIPOL1Q8TD10 442 aa10.02□□□□□ -0.81
PRPF4B-209ENST00000494674 LZICQ8WZA0 190 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms