RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 SRA1Q9HD15 236 aaKnown RBP8.19□□□□□ -1.1
ITGB1-217ENST00000494395 ADAP2Q9NPF8 381 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 RRAGDQ9NQL2 400 aaPredicted RBP8.19□□□□□ -1.1
ITGB1-217ENST00000494395 LYARQ9NX58 379 aaKnown RBP8.19□□□□□ -1.1
ITGB1-217ENST00000494395 MS4A12Q9NXJ0 267 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 SENP1Q9P0U3 644 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 PHF11Q9UIL8 331 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 MID2Q9UJV3 735 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 ZNF223Q9UK11 482 aaPredicted RBP8.19□□□□□ -1.1
ITGB1-217ENST00000494395 ADAM29Q9UKF5 820 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 FBXW2Q9UKT8 454 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 G3BP2Q9UN86 482 aaKnown RBP8.19□□□□□ -1.1
ITGB1-217ENST00000494395 MRPS33Q9Y291 106 aaKnown RBP8.19□□□□□ -1.1
ITGB1-217ENST00000494395 TIMM22Q9Y584 194 aa8.19□□□□□ -1.1
ITGB1-217ENST00000494395 HEMK1Q9Y5R4 338 aaPredicted RBP8.19□□□□□ -1.1
ITGB1-217ENST00000494395 A0A1W2PR48 441 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 SYNDIG1LA6NDD5 238 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 H3BQF6 201 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 CLDN4O14493 209 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 SLC28A2O43868 658 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 TRIM13O60858 407 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 LDB3O75112 727 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 PRKRAO75569 313 aaKnown RBP8.18□□□□□ -1.1
ITGB1-217ENST00000494395 RGS9O75916 674 aaPredicted RBP8.18□□□□□ -1.1
ITGB1-217ENST00000494395 AIFM1O95831 613 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 KRT6AP02538 564 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 GBAP04062 536 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 KRT6BP04259 564 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 CELA3AP09093 270 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 FAM58BPP0C7Q3 252 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 HMOX2P30519 316 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 ARRB2P32121 409 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 KRT6CP48668 564 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 AP2B1P63010 937 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 ACTN3Q08043 901 aaPredicted RBP8.18□□□□□ -1.1
ITGB1-217ENST00000494395 RCN2Q14257 317 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 PLEKHN1Q494U1 663 aaPredicted RBP8.18□□□□□ -1.1
ITGB1-217ENST00000494395 SGO1Q5FBB7 561 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 RPS26P11Q5JNZ5 115 aaPredicted RBP8.18□□□□□ -1.1
ITGB1-217ENST00000494395 CEP85LQ5SZL2 805 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 CES4AQ5XG92 561 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 C1orf229Q6ZS94 237 aaPredicted RBP8.18□□□□□ -1.1
ITGB1-217ENST00000494395 CUZD1Q86UP6 607 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 GPR180Q86V85 440 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 EXOC3L1Q86VI1 746 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 NUDT13Q86X67 352 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 KIF2BQ8N4N8 673 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 DNAJB14Q8TBM8 379 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 METTL6Q8TCB7 284 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 UCN3Q969E3 161 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 PNPLA2Q96AD5 504 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 PGM2Q96G03 612 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 SMC6Q96SB8 1091 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 RSRP1Q9BUV0 290 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 ALOXE3Q9BYJ1 711 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 ADAM19Q9H013 955 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 EPS8L2Q9H6S3 715 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 SSU72Q9NP77 194 aaKnown RBP8.18□□□□□ -1.1
ITGB1-217ENST00000494395 MID1IP1Q9NPA3 183 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 TEX10Q9NXF1 929 aaPredicted RBP8.18□□□□□ -1.1
ITGB1-217ENST00000494395 PTGFRNQ9P2B2 879 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 VPS29Q9UBQ0 182 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 SLC12A4Q9UP95 1085 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 B3GNT3Q9Y2A9 372 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 CCL27Q9Y4X3 112 aa8.18□□□□□ -1.1
ITGB1-217ENST00000494395 MYOCOSA0A1B0GUC4 107 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 A0A1W2PS29 197 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 TMEM200CA6NKL6 621 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 WASHC1A8K0Z3 465 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 A8MUA0 341 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 NPIPB8E9PQR5 432 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 PGRMC2O15173 223 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 RGS16O15492 202 aaPredicted RBP8.17□□□□□ -1.1
ITGB1-217ENST00000494395 CTIFO43310 598 aaKnown RBP8.17□□□□□ -1.1
ITGB1-217ENST00000494395 NPHS1O60500 1241 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 ULK1O75385 1050 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 DDAH2O95865 285 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 KLK1P06870 262 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 DHRS4L1P0CG22 281 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 NR2F6P10588 404 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 BUD31P41223 144 aaPredicted RBP8.17□□□□□ -1.1
ITGB1-217ENST00000494395 RAE1P78406 368 aaKnown RBP8.17□□□□□ -1.1
ITGB1-217ENST00000494395 ID2Q02363 134 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 FOLH1Q04609 750 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 TLE1Q04724 770 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 SLC13A2Q13183 592 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 SERTAD2Q14140 314 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 MPP2Q14168 576 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 ELAVL1Q15717 326 aaKnown RBP8.17□□□□□ -1.1
ITGB1-217ENST00000494395 IRAK1BP1Q5VVH5 260 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 GALNT18Q6P9A2 607 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 DGAT2L6Q6ZPD8 337 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 LINC00696Q6ZRV3 163 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 RNF165Q6ZSG1 346 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 PAGE2Q7Z2X7 111 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 CRLF3Q8IUI8 442 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 LGI4Q8N135 537 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 ZADH2Q8N4Q0 377 aa8.17□□□□□ -1.1
ITGB1-217ENST00000494395 C1orf52Q8N6N3 182 aaKnown RBP8.17□□□□□ -1.1
ITGB1-217ENST00000494395 GBP7Q8N8V2 638 aaPredicted RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms