RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 ZNF551Q7Z340 670 aaPredicted RBP6.56□□□□□ -1.36
VPS13B-205ENST00000493587 CCDC71Q8IV32 467 aaPredicted RBP6.56□□□□□ -1.36
VPS13B-205ENST00000493587 FUNDC1Q8IVP5 155 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 PELI3Q8N2H9 469 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 TMEM151AQ8N4L1 468 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 CAMKVQ8NCB2 501 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 TMEM161BQ8NDZ6 487 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 PPHLN1Q8NEY8 458 aaKnown RBP6.56□□□□□ -1.36
VPS13B-205ENST00000493587 ACOT11Q8WXI4 607 aaPredicted RBP6.56□□□□□ -1.36
VPS13B-205ENST00000493587 UCN3Q969E3 161 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 TMEM203Q969S6 136 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 CHFRQ96EP1 664 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 UBXN10Q96LJ8 280 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 RTP3Q9BQQ7 232 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 ZNF559Q9BR84 538 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 MARVELD1Q9BSK0 173 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 RSRP1Q9BUV0 290 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 FXYD6Q9H0Q3 95 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 DNAJB11Q9UBS4 358 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 SAMHD1Q9Y3Z3 626 aaKnown RBP6.56□□□□□ -1.36
VPS13B-205ENST00000493587 ACOD1A6NK06 481 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 RFXAPO00287 272 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 UPK1AO00322 258 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 TXNDC12O95881 172 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 ADRB3P13945 408 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 HGFP14210 728 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 CD19P15391 556 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 NME1P15531 152 aaKnown RBP6.56□□□□□ -1.36
VPS13B-205ENST00000493587 PGAM1P18669 254 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 ACVR2AP27037 513 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 CSF2RBP32927 897 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 SPAM1P38567 509 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 PBX3P40426 434 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 SUOXP51687 545 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 CRISP3P54108 245 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 CDH4P55283 916 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 EEFSECP57772 596 aaKnown RBP6.56□□□□□ -1.36
VPS13B-205ENST00000493587 OGDHQ02218 1023 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 NCMAPQ5T1S8 102 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 CERCAMQ5T4B2 595 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 OTUD1Q5VV17 481 aaPredicted RBP6.56□□□□□ -1.36
VPS13B-205ENST00000493587 FAM219BQ5XKK7 198 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 PSRC1Q6PGN9 363 aaPredicted RBP6.56□□□□□ -1.36
VPS13B-205ENST00000493587 CNIH2Q6PI25 160 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 LDLRAD3Q86YD5 345 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 PUSL1Q8N0Z8 303 aaKnown RBP6.56□□□□□ -1.36
VPS13B-205ENST00000493587 C10orf53Q8N6V4 93 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 FAM86B1Q8N7N1 296 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 C12orf29Q8N999 325 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 TEX19Q8NA77 164 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 UXS1Q8NBZ7 420 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 PLA2G15Q8NCC3 412 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 CHST14Q8NCH0 376 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 TRPV1Q8NER1 839 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 ISL2Q96A47 359 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 RBBP8Q99708 897 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 GGACTQ9BVM4 153 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 NLNQ9BYT8 704 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 KATNBL1Q9H079 304 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 OR51B6Q9H340 312 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 TMPRSS5Q9H3S3 457 aa6.56□□□□□ -1.36
VPS13B-205ENST00000493587 ADARB2Q9NS39 739 aaKnown RBP6.56□□□□□ -1.36
VPS13B-205ENST00000493587 PDP1Q9P0J1 537 aaPredicted RBP6.56□□□□□ -1.36
VPS13B-205ENST00000493587 IGKV6-21A0A0C4DH24 114 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 A0A0G2JLL6 359 aaPredicted RBP6.55□□□□□ -1.36
VPS13B-205ENST00000493587 LILRB3O75022 631 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 ACPPP15309 386 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 CYP2B6P20813 491 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 PTPN6P29350 595 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 DDTP30046 118 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 GATMP50440 423 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 PWP1Q13610 501 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 ZNHIT3Q15649 155 aaPredicted RBP6.55□□□□□ -1.36
VPS13B-205ENST00000493587 GCNT6Q5T4J0 391 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 DCAF15Q66K64 600 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 LAIR1Q6GTX8 287 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 HEPHL1Q6MZM0 1159 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 PGBD2Q6P3X8 592 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 ETV3LQ6ZN32 361 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 PRRT2Q7Z6L0 340 aaPredicted RBP6.55□□□□□ -1.36
VPS13B-205ENST00000493587 PLEKHH3Q7Z736 793 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 ABRAQ8N0Z2 381 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 DTWD1Q8N5C7 304 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 MEIOBQ8N635 442 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 WNT2BQ93097 391 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 LRIG1Q96JA1 1093 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 PGLYRP2Q96PD5 576 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 ACCSQ96QU6 501 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 MENTQ9BUN1 341 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 CPEB1Q9BZB8 566 aaKnown RBP6.55□□□□□ -1.36
VPS13B-205ENST00000493587 NT5DC2Q9H857 520 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 PLAC1Q9HBJ0 212 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 SPASTQ9UBP0 616 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 GABRQQ9UN88 632 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 DUSP12Q9UNI6 340 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 MMACHCQ9Y4U1 282 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 GBF1Q92538 1859 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 SCN1AP35498 2009 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 GNG14A0A1W2PPG7 69 aa6.55□□□□□ -1.36
VPS13B-205ENST00000493587 TMEM150BA6NC51 233 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms