RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 CPSF6Q16630 551 aaKnown RBP eCLIP11.52□□□□□ -0.57
COL6A1-205ENST00000492851 SPRED3Q2MJR0 410 aa11.52□□□□□ -0.57
COL6A1-205ENST00000492851 TBCELQ5QJ74 424 aa11.52□□□□□ -0.57
COL6A1-205ENST00000492851 NUDT13Q86X67 352 aa11.52□□□□□ -0.57
COL6A1-205ENST00000492851 OR4N5Q8IXE1 308 aa11.52□□□□□ -0.57
COL6A1-205ENST00000492851 TAGAPQ8N103 731 aa11.52□□□□□ -0.57
COL6A1-205ENST00000492851 L3MBTL4Q8NA19 623 aa11.52□□□□□ -0.57
COL6A1-205ENST00000492851 ACBD4Q8NC06 268 aa11.52□□□□□ -0.57
COL6A1-205ENST00000492851 KCTD4Q8WVF5 259 aa11.52□□□□□ -0.57
COL6A1-205ENST00000492851 SERPINI1Q99574 410 aa11.52□□□□□ -0.57
COL6A1-205ENST00000492851 LDAHQ9H6V9 325 aa11.52□□□□□ -0.57
COL6A1-205ENST00000492851 BOKQ9UMX3 212 aaPredicted RBP11.52□□□□□ -0.57
COL6A1-205ENST00000492851 ATG4BQ9Y4P1 393 aa11.52□□□□□ -0.57
COL6A1-205ENST00000492851 PCDHGB3Q9Y5G1 929 aa11.52□□□□□ -0.57
COL6A1-205ENST00000492851 MYOCOSA0A1B0GUC4 107 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 FAM166BA8MTA8 275 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 NPIPA2E9PIF3 369 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 NPIPA3F8WFD2 350 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 C19orf84I3L1E1 186 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 AQP7O14520 342 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 ZNHIT1O43257 154 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 WDR1O75083 606 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 GUCY1B2O75343 617 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 KRT38O76015 456 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 INHBAP08476 426 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 FAM58BPP0C7Q3 252 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 GABRA1P14867 456 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 CNTFP26441 200 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 ACVR2AP27037 513 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 MAN2A2P49641 1150 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 SERPINB9P50453 376 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 PMPCAQ10713 525 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 TRADDQ15628 312 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 TSNAXIP1Q2TAA8 658 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 ZNF791Q3KP31 576 aaPredicted RBP11.51□□□□□ -0.57
COL6A1-205ENST00000492851 WLSQ5T9L3 541 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 C18orf63Q68DL7 685 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 MRM1Q6IN84 353 aaKnown RBP11.51□□□□□ -0.57
COL6A1-205ENST00000492851 MEX3BQ6ZN04 569 aaKnown RBP11.51□□□□□ -0.57
COL6A1-205ENST00000492851 RNF111Q6ZNA4 994 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 TRILQ7L0X0 811 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 PAGE2Q7Z2X7 111 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 ZNF295-AS1Q8N0V1 137 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 CNPY4Q8N129 248 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 TMEM251Q8N6I4 163 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 ZNF321PQ8N8H1 164 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 MYRIPQ8NFW9 859 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 OR5M3Q8NGP4 307 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 PAQR8Q8TEZ7 354 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 TP53INP1Q96A56 240 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 PPWD1Q96BP3 646 aaKnown RBP11.51□□□□□ -0.57
COL6A1-205ENST00000492851 MRRFQ96E11 262 aaKnown RBP11.51□□□□□ -0.57
COL6A1-205ENST00000492851 SPACA9Q96E40 222 aaPredicted RBP11.51□□□□□ -0.57
COL6A1-205ENST00000492851 SMC6Q96SB8 1091 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 TREX2Q9BQ50 279 aaPredicted RBP11.51□□□□□ -0.57
COL6A1-205ENST00000492851 LRRC1Q9BTT6 524 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 FUT8Q9BYC5 575 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 VPS11Q9H270 941 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 ACSS3Q9H6R3 686 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 MCCC2Q9HCC0 563 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 ZDHHC18Q9NUE0 388 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 NMRK1Q9NWW6 199 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 QPCTLQ9NXS2 382 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 B4GALT7Q9UBV7 327 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 ADAM29Q9UKF5 820 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 ACAD8Q9UKU7 415 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 ASB4Q9Y574 426 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.51□□□□□ -0.57
COL6A1-205ENST00000492851 MYO7BQ6PIF6 2116 aa11.51□□□□□ -0.57
COL6A1-205ENST00000492851 APCP25054 2843 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 ABCA12Q86UK0 2595 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 A0A0A6YYD5 115 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 HMX2A2RU54 273 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 PINLYPA6NC86 204 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 ANKRD33BA6NCL7 494 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 STX16-NPEPL1H3BU86 382 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 STX16O14662 325 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 TP53I11O14683 189 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 SMIM24O75264 130 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 FBXO45P0C2W1 286 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 NR2F6P10588 404 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 PIK3R1P27986 724 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 BSGP35613 385 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 ARL1P40616 181 aaPredicted RBP11.5□□□□□ -0.57
COL6A1-205ENST00000492851 MAGEA5P43359 124 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 CCNG1P51959 295 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 HNRNPH2P55795 449 aaKnown RBP11.5□□□□□ -0.57
COL6A1-205ENST00000492851 KCNJ2P63252 427 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 RPP38P78345 283 aaKnown RBP11.5□□□□□ -0.57
COL6A1-205ENST00000492851 IRF9Q00978 393 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 SLC7A5Q01650 507 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 FOXO1Q12778 655 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 ZNF267Q14586 743 aaPredicted RBP11.5□□□□□ -0.57
COL6A1-205ENST00000492851 SF3B4Q15427 424 aaKnown RBP eCLIP11.5□□□□□ -0.57
COL6A1-205ENST00000492851 CDSNQ15517 529 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 WHAMMP3Q1A5X7 153 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 LGSNQ5TDP6 509 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 C6orf163Q5TEZ5 329 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 HLA-DQA1Q5Y7H0 255 aa11.5□□□□□ -0.57
COL6A1-205ENST00000492851 TTC19Q6DKK2 380 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms