RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 RUNDC3BQ96NL0 473 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 ATF6BQ99941 703 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 RBM4BQ9BQ04 359 aaKnown RBP3.26□□□□□ -1.89
CLK1-213ENST00000492793 TRPV6Q9H1D0 765 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 CARD9Q9H257 536 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 TMEM245Q9H330 911 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 TUBB1Q9H4B7 451 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 ELL3Q9HB65 397 aaPredicted RBP3.26□□□□□ -1.89
CLK1-213ENST00000492793 SLC25A19Q9HC21 320 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 SYTL2Q9HCH5 934 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 TAS2R16Q9NYV7 291 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 THYN1Q9P016 225 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 VPS54Q9P1Q0 977 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 PAK5Q9P286 719 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 FAM153AQ9UHL3 310 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 TRMT6Q9UJA5 497 aaKnown RBP3.26□□□□□ -1.89
CLK1-213ENST00000492793 TSPAN16Q9UKR8 245 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 ZNF346Q9UL40 294 aaKnown RBP3.26□□□□□ -1.89
CLK1-213ENST00000492793 DIMT1Q9UNQ2 313 aaKnown RBP3.26□□□□□ -1.89
CLK1-213ENST00000492793 TEX264Q9Y6I9 313 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 PCNX3Q9H6A9 2034 aa3.26□□□□□ -1.89
CLK1-213ENST00000492793 GON4LQ3T8J9 2241 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 IGHV3OR16-10A0A075B7F0 116 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 A0A1B0GTH9 108 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 MEI4A8MW99 385 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 NTN3O00634 580 aaPredicted RBP3.25□□□□□ -1.89
CLK1-213ENST00000492793 TXNDC12O95881 172 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 SLC4A1P02730 911 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 SLC1A4P43007 532 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 CASP9P55211 416 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 YBEYP58557 167 aaPredicted RBP3.25□□□□□ -1.89
CLK1-213ENST00000492793 KRTAP10-9P60411 292 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 ACY1Q03154 408 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 MFGE8Q08431 387 aaPredicted RBP3.25□□□□□ -1.89
CLK1-213ENST00000492793 LY6DQ14210 128 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 EMC2Q15006 297 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 EXOSC7Q15024 291 aaKnown RBP3.25□□□□□ -1.89
CLK1-213ENST00000492793 CCDC40Q4G0X9 1142 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 TCHHL1Q5QJ38 904 aaPredicted RBP3.25□□□□□ -1.89
CLK1-213ENST00000492793 HIST2H2AA3Q6FI13 130 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 ASRGL1Q7L266 308 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 BNIPLQ7Z465 357 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 ADAMTSL2Q86TH1 951 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 LINC00518Q8N0U6 118 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 ABHD12Q8N2K0 398 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 SAMD12Q8N8I0 201 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 GOLGA5Q8TBA6 731 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 FBXO25Q8TCJ0 367 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 NABP1Q96AH0 204 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 RAB39BQ96DA2 213 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 COG3Q96JB2 828 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 CDHR1Q96JP9 859 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 SOSTQ9BQB4 213 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 OCR1Q9BZK8 76 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 XPO4Q9C0E2 1151 aaKnown RBP3.25□□□□□ -1.89
CLK1-213ENST00000492793 EGLN1Q9GZT9 426 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 NACA2Q9H009 215 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 NT5DC2Q9H857 520 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 JPT2Q9H910 190 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 KCNMB3Q9NPA1 279 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 ANO10Q9NW15 660 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 IL19Q9UHD0 177 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 ENTPD4Q9Y227 616 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 SLC9A8Q9Y2E8 581 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 FBXO7Q9Y3I1 522 aa3.25□□□□□ -1.89
CLK1-213ENST00000492793 TEX48A0A1B0GUV7 120 aa3.24□□□□□ -1.89
CLK1-213ENST00000492793 ARHGAP42A6NI28 874 aa3.24□□□□□ -1.89
CLK1-213ENST00000492793 CHEK1O14757 476 aa3.24□□□□□ -1.89
CLK1-213ENST00000492793 CFLARO15519 480 aa3.24□□□□□ -1.89
CLK1-213ENST00000492793 CSDE1O75534 798 aaKnown RBP3.24□□□□□ -1.89
CLK1-213ENST00000492793 CXCL14O95715 111 aa3.24□□□□□ -1.89
CLK1-213ENST00000492793 PROS1P07225 676 aa3.24□□□□□ -1.89
CLK1-213ENST00000492793 HIST1H2AGP0C0S8 130 aaPredicted RBP3.24□□□□□ -1.89
CLK1-213ENST00000492793 HSD17B1P14061 328 aa3.24□□□□□ -1.89
CLK1-213ENST00000492793 GNSP15586 552 aa3.24□□□□□ -1.89
CLK1-213ENST00000492793 SPRP35270 261 aaPredicted RBP3.24□□□□□ -1.89
CLK1-213ENST00000492793 NLRP11P59045 1033 aaKnown RBP3.24□□□□□ -1.89
CLK1-213ENST00000492793 RPS4XP62701 263 aaKnown RBP3.24□□□□□ -1.89
CLK1-213ENST00000492793 CDKL1Q00532 357 aa3.24□□□□□ -1.89
CLK1-213ENST00000492793 SIX1Q15475 284 aaPredicted RBP3.24□□□□□ -1.89
CLK1-213ENST00000492793 SNAI3Q3KNW1 292 aa3.24□□□□□ -1.89
CLK1-213ENST00000492793 AGAP7PQ5VUJ5 663 aa3.24□□□□□ -1.89
CLK1-213ENST00000492793 STEAP1BQ6NZ63 245 aa3.24□□□□□ -1.89
CLK1-213ENST00000492793 ZNF343Q6P1L6 599 aa3.24□□□□□ -1.89
CLK1-213ENST00000492793 ZNF841Q6ZN19 808 aa3.24□□□□□ -1.89
CLK1-213ENST00000492793 MIER3Q7Z3K6 550 aa3.24□□□□□ -1.89
CLK1-213ENST00000492793 SLC25A42Q86VD7 318 aa3.24□□□□□ -1.89
CLK1-213ENST00000492793 CARM1Q86X55 608 aa3.24□□□□□ -1.89
CLK1-213ENST00000492793 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.24□□□□□ -1.89
CLK1-213ENST00000492793 GVQW1Q8N7I0 195 aa3.24□□□□□ -1.89
CLK1-213ENST00000492793 ZNF781Q8N8C0 355 aa3.24□□□□□ -1.89
CLK1-213ENST00000492793 OR1K1Q8NGR3 316 aa3.24□□□□□ -1.89
CLK1-213ENST00000492793 OR1B1Q8NGR6 318 aa3.24□□□□□ -1.89
CLK1-213ENST00000492793 SSC4DQ8WTU2 575 aa3.24□□□□□ -1.89
CLK1-213ENST00000492793 RASL10AQ92737 203 aa3.24□□□□□ -1.89
CLK1-213ENST00000492793 HIST1H2ACQ93077 130 aa3.24□□□□□ -1.89
CLK1-213ENST00000492793 SLCO4A1Q96BD0 722 aa3.24□□□□□ -1.89
CLK1-213ENST00000492793 GPR137Q96N19 417 aa3.24□□□□□ -1.89
CLK1-213ENST00000492793 TMEM237Q96Q45 408 aa3.24□□□□□ -1.89
CLK1-213ENST00000492793 ATOH8Q96SQ7 321 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 256.9 ms