RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 ART5Q96L15 291 aa29.07■■■□□ 2.24
LDB1-204ENST00000490751 PELOQ9BRX2 385 aaKnown RBP29.07■■■□□ 2.24
LDB1-204ENST00000490751 ELOVL6Q9H5J4 265 aa29.07■■■□□ 2.24
LDB1-204ENST00000490751 DEPPQ9NTK1 212 aa29.07■■■□□ 2.24
LDB1-204ENST00000490751 GTF3C1Q12789 2109 aa29.06■■■□□ 2.24
LDB1-204ENST00000490751 IQANK1A0A1B0GTG1 560 aa29.06■■■□□ 2.24
LDB1-204ENST00000490751 ZNF354AO60765 605 aaPredicted RBP29.06■■■□□ 2.24
LDB1-204ENST00000490751 ABOP16442 354 aa29.06■■■□□ 2.24
LDB1-204ENST00000490751 PTGER1P34995 402 aa29.06■■■□□ 2.24
LDB1-204ENST00000490751 LETMD1Q6P1Q0 360 aa29.06■■■□□ 2.24
LDB1-204ENST00000490751 CHERPQ8IWX8 916 aaKnown RBP29.06■■■□□ 2.24
LDB1-204ENST00000490751 C16orf52Q8NHV5 167 aa29.06■■■□□ 2.24
LDB1-204ENST00000490751 UCN3Q969E3 161 aa29.06■■■□□ 2.24
LDB1-204ENST00000490751 CNPPD1Q9BV87 410 aa29.06■■■□□ 2.24
LDB1-204ENST00000490751 MRPL1Q9BYD6 325 aaKnown RBP29.06■■■□□ 2.24
LDB1-204ENST00000490751 EPB41L4BQ9H329 900 aa29.06■■■□□ 2.24
LDB1-204ENST00000490751 HS6ST1O60243 411 aa29.05■■■□□ 2.24
LDB1-204ENST00000490751 OR10H2O60403 315 aa29.05■■■□□ 2.24
LDB1-204ENST00000490751 ESRRAP11474 423 aaPredicted RBP29.05■■■□□ 2.24
LDB1-204ENST00000490751 TAC1P20366 129 aa29.05■■■□□ 2.24
LDB1-204ENST00000490751 OR52E8Q6IFG1 317 aa29.05■■■□□ 2.24
LDB1-204ENST00000490751 C9orf40Q8IXQ3 194 aa29.05■■■□□ 2.24
LDB1-204ENST00000490751 NUBPLQ8TB37 319 aa29.05■■■□□ 2.24
LDB1-204ENST00000490751 FARSBQ9NSD9 589 aaKnown RBP29.05■■■□□ 2.24
LDB1-204ENST00000490751 TEX10Q9NXF1 929 aaPredicted RBP29.05■■■□□ 2.24
LDB1-204ENST00000490751 AHSPQ9NZD4 102 aa29.05■■■□□ 2.24
LDB1-204ENST00000490751 PSMC3IPQ9P2W1 217 aaPredicted RBP29.05■■■□□ 2.24
LDB1-204ENST00000490751 EML6Q6ZMW3 1958 aa29.04■■■□□ 2.24
LDB1-204ENST00000490751 KLK1P06870 262 aa29.04■■■□□ 2.24
LDB1-204ENST00000490751 HERVK_113P63132 956 aa29.04■■■□□ 2.24
LDB1-204ENST00000490751 ERVK-8P63133 956 aa29.04■■■□□ 2.24
LDB1-204ENST00000490751 ASPHQ12797 758 aa29.04■■■□□ 2.24
LDB1-204ENST00000490751 SPRED3Q2MJR0 410 aa29.04■■■□□ 2.24
LDB1-204ENST00000490751 ZNF750Q32MQ0 723 aa29.04■■■□□ 2.24
LDB1-204ENST00000490751 OPN5Q6U736 354 aa29.04■■■□□ 2.24
LDB1-204ENST00000490751 RTL4Q6ZR62 310 aa29.04■■■□□ 2.24
LDB1-204ENST00000490751 MRGPRGQ86SM5 289 aa29.04■■■□□ 2.24
LDB1-204ENST00000490751 LCA5Q86VQ0 697 aa29.04■■■□□ 2.24
LDB1-204ENST00000490751 MYRIPQ8NFW9 859 aa29.04■■■□□ 2.24
LDB1-204ENST00000490751 TRPC4APQ8TEL6 797 aa29.04■■■□□ 2.24
LDB1-204ENST00000490751 ERVK-6Q9BXR3 956 aa29.04■■■□□ 2.24
LDB1-204ENST00000490751 FETUBQ9UGM5 382 aa29.04■■■□□ 2.24
LDB1-204ENST00000490751 ERVK-19Q9WJR5 959 aa29.04■■■□□ 2.24
LDB1-204ENST00000490751 CLCQ05315 142 aa29.03■■■□□ 2.24
LDB1-204ENST00000490751 ZNF267Q14586 743 aaPredicted RBP29.03■■■□□ 2.24
LDB1-204ENST00000490751 MPEG1Q2M385 716 aa29.03■■■□□ 2.24
LDB1-204ENST00000490751 FAM219BQ5XKK7 198 aa29.03■■■□□ 2.24
LDB1-204ENST00000490751 RPTNQ6XPR3 784 aa29.03■■■□□ 2.24
LDB1-204ENST00000490751 BNC2Q6ZN30 1099 aaPredicted RBP29.03■■■□□ 2.24
LDB1-204ENST00000490751 PAGE2Q7Z2X7 111 aa29.03■■■□□ 2.24
LDB1-204ENST00000490751 FGD2Q7Z6J4 655 aa29.03■■■□□ 2.24
LDB1-204ENST00000490751 METTL4Q8N3J2 472 aa29.03■■■□□ 2.24
LDB1-204ENST00000490751 ZNF808Q8N4W9 903 aaPredicted RBP29.03■■■□□ 2.24
LDB1-204ENST00000490751 SELENOMQ8WWX9 145 aa29.03■■■□□ 2.24
LDB1-204ENST00000490751 RIT1Q92963 219 aa29.03■■■□□ 2.24
LDB1-204ENST00000490751 SDAD1Q9NVU7 687 aaKnown RBP eCLIP29.03■■■□□ 2.24
LDB1-204ENST00000490751 TRPS1Q9UHF7 1281 aa29.03■■■□□ 2.24
LDB1-204ENST00000490751 ZNF225Q9UK10 706 aa29.03■■■□□ 2.24
LDB1-204ENST00000490751 ADAM29Q9UKF5 820 aa29.03■■■□□ 2.24
LDB1-204ENST00000490751 SNX6Q9UNH7 406 aa29.03■■■□□ 2.24
LDB1-204ENST00000490751 SLC12A4Q9UP95 1085 aa29.03■■■□□ 2.24
LDB1-204ENST00000490751 A0A0G2JMM0 328 aa29.02■■■□□ 2.24
LDB1-204ENST00000490751 A0A1W2PPB8 328 aa29.02■■■□□ 2.24
LDB1-204ENST00000490751 A0A1W2PRS3 328 aa29.02■■■□□ 2.24
LDB1-204ENST00000490751 ARHGAP10A1A4S6 786 aa29.02■■■□□ 2.24
LDB1-204ENST00000490751 PINLYPA6NC86 204 aa29.02■■■□□ 2.24
LDB1-204ENST00000490751 KIR3DP1A8MWS1 328 aa29.02■■■□□ 2.24
LDB1-204ENST00000490751 PRSS44E7EML9 344 aa29.02■■■□□ 2.24
LDB1-204ENST00000490751 GOLGA8RI6L899 631 aa29.02■■■□□ 2.24
LDB1-204ENST00000490751 PGRMC2O15173 223 aa29.02■■■□□ 2.24
LDB1-204ENST00000490751 CDC40O60508 579 aaKnown RBP eCLIP29.02■■■□□ 2.24
LDB1-204ENST00000490751 SUPT7LO94864 414 aa29.02■■■□□ 2.24
LDB1-204ENST00000490751 OR4F21O95013 312 aa29.02■■■□□ 2.24
LDB1-204ENST00000490751 PDYNP01213 254 aa29.02■■■□□ 2.24
LDB1-204ENST00000490751 HSD17B3P37058 310 aa29.02■■■□□ 2.24
LDB1-204ENST00000490751 ADORA2A-AS1P86434 159 aa29.02■■■□□ 2.24
LDB1-204ENST00000490751 UNC50Q53HI1 259 aa29.02■■■□□ 2.24
LDB1-204ENST00000490751 CMPK2Q5EBM0 449 aa29.02■■■□□ 2.24
LDB1-204ENST00000490751 PIGGQ5H8A4 983 aa29.02■■■□□ 2.24
LDB1-204ENST00000490751 ZNF678Q5SXM1 525 aa29.02■■■□□ 2.24
LDB1-204ENST00000490751 OR2M7Q8NG81 312 aa29.02■■■□□ 2.24
LDB1-204ENST00000490751 ACMSDQ8TDX5 336 aa29.02■■■□□ 2.24
LDB1-204ENST00000490751 TMEM237Q96Q45 408 aa29.02■■■□□ 2.24
LDB1-204ENST00000490751 TBK1Q9UHD2 729 aa29.02■■■□□ 2.24
LDB1-204ENST00000490751 G3V3Y1 287 aa29.01■■■□□ 2.23
LDB1-204ENST00000490751 DLX3O60479 287 aa29.01■■■□□ 2.23
LDB1-204ENST00000490751 SLC35E2P0CK97 266 aa29.01■■■□□ 2.23
LDB1-204ENST00000490751 ART3Q13508 389 aa29.01■■■□□ 2.23
LDB1-204ENST00000490751 CCNYL2Q5T2Q4 361 aa29.01■■■□□ 2.23
LDB1-204ENST00000490751 RNF111Q6ZNA4 994 aa29.01■■■□□ 2.23
LDB1-204ENST00000490751 GOLM1Q8NBJ4 401 aa29.01■■■□□ 2.23
LDB1-204ENST00000490751 SGCZQ96LD1 299 aa29.01■■■□□ 2.23
LDB1-204ENST00000490751 MEMO1Q9Y316 297 aa29.01■■■□□ 2.23
LDB1-204ENST00000490751 NCOA6Q14686 2063 aaPredicted RBP29■■■□□ 2.23
LDB1-204ENST00000490751 A0A1W2PS29 197 aa29■■■□□ 2.23
LDB1-204ENST00000490751 ATP5F1P24539 256 aaPredicted RBP29■■■□□ 2.23
LDB1-204ENST00000490751 PIK3R1P27986 724 aa29■■■□□ 2.23
LDB1-204ENST00000490751 PLGLB1Q02325 96 aa29■■■□□ 2.23
LDB1-204ENST00000490751 NDUFAF5Q5TEU4 345 aa29■■■□□ 2.23
LDB1-204ENST00000490751 SLC29A4Q7RTT9 530 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 147.5 ms