RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 MEX3DQ86XN8 651 aaKnown RBP12.41□□□□□ -0.42
EXOSC3-207ENST00000490516 CNEP1R1Q8N9A8 125 aa12.41□□□□□ -0.42
EXOSC3-207ENST00000490516 FAM83FQ8NEG4 500 aaPredicted RBP12.41□□□□□ -0.42
EXOSC3-207ENST00000490516 UCN3Q969E3 161 aa12.41□□□□□ -0.42
EXOSC3-207ENST00000490516 NEIL2Q969S2 332 aa12.41□□□□□ -0.42
EXOSC3-207ENST00000490516 GTPBP3Q969Y2 492 aaKnown RBP12.41□□□□□ -0.42
EXOSC3-207ENST00000490516 TSNARE1Q96NA8 513 aa12.41□□□□□ -0.42
EXOSC3-207ENST00000490516 TCF12Q99081 682 aa12.41□□□□□ -0.42
EXOSC3-207ENST00000490516 GPR21Q99679 349 aa12.41□□□□□ -0.42
EXOSC3-207ENST00000490516 NPLQ9BXD5 320 aaPredicted RBP12.41□□□□□ -0.42
EXOSC3-207ENST00000490516 ESRP2Q9H6T0 727 aaKnown RBP12.41□□□□□ -0.42
EXOSC3-207ENST00000490516 NHEJ1Q9H9Q4 299 aaPredicted RBP12.41□□□□□ -0.42
EXOSC3-207ENST00000490516 DHRS7Q9Y394 339 aa12.41□□□□□ -0.42
EXOSC3-207ENST00000490516 ALPK2Q86TB3 2170 aa12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 IGHV4-30-2A0A087WSY4 118 aa12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 HRKO00198 91 aa12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 ERI3O43414 337 aaKnown RBP12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 B3GALT2O43825 422 aa12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 TGM6O95932 706 aa12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 HNRNPH1P31943 449 aaKnown RBP12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 FDFT1P37268 417 aa12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 UBASH3AP57075 661 aa12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 REEP5Q00765 189 aa12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 CTBP1Q13363 440 aa12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 CSHL1Q14406 222 aa12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 NTRK2Q16620 822 aa12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 TBCELQ5QJ74 424 aa12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 LIPNQ5VXI9 398 aa12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 C11orf63Q6NUN7 778 aa12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 ZNF549Q6P9A3 640 aa12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 PRUNE1Q86TP1 453 aa12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 GRAMD2AQ8IUY3 354 aa12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 DND1Q8IYX4 353 aaKnown RBP12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 CD200R1Q8TD46 325 aa12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 DOK4Q8TEW6 326 aa12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 GAL3ST3Q96A11 431 aa12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 PLPPR2Q96GM1 343 aa12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 SENP5Q96HI0 755 aaPredicted RBP12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 CCDC42Q96M95 316 aa12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 TNFRSF13CQ96RJ3 184 aa12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 GAL3ST4Q96RP7 486 aa12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 DNAJC7Q99615 494 aa12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 SLC39A3Q9BRY0 314 aa12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 TMEM204Q9BSN7 226 aa12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 KLHL4Q9C0H6 718 aa12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 ELOVL5Q9NYP7 299 aa12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 GDF2Q9UK05 429 aaPredicted RBP12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 INTUQ9ULD6 942 aa12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 TFR2Q9UP52 801 aa12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 LIPT1Q9Y234 373 aa12.4□□□□□ -0.42
EXOSC3-207ENST00000490516 SYNDIG1LA6NDD5 238 aa12.39□□□□□ -0.43
EXOSC3-207ENST00000490516 FRG2CA6NGY1 282 aa12.39□□□□□ -0.43
EXOSC3-207ENST00000490516 GNB5O14775 395 aa12.39□□□□□ -0.43
EXOSC3-207ENST00000490516 IGKV3-11P04433 115 aa12.39□□□□□ -0.43
EXOSC3-207ENST00000490516 APRTP07741 180 aa12.39□□□□□ -0.43
EXOSC3-207ENST00000490516 THBS1P07996 1170 aa12.39□□□□□ -0.43
EXOSC3-207ENST00000490516 ZNF16P17020 682 aaPredicted RBP12.39□□□□□ -0.43
EXOSC3-207ENST00000490516 OGNP20774 298 aaKnown RBP12.39□□□□□ -0.43
EXOSC3-207ENST00000490516 PTPN6P29350 595 aa12.39□□□□□ -0.43
EXOSC3-207ENST00000490516 STARP49675 285 aa12.39□□□□□ -0.43
EXOSC3-207ENST00000490516 LIM2P55344 173 aa12.39□□□□□ -0.43
EXOSC3-207ENST00000490516 FBXW4P57775 412 aa12.39□□□□□ -0.43
EXOSC3-207ENST00000490516 VLDLRP98155 873 aa12.39□□□□□ -0.43
EXOSC3-207ENST00000490516 SBSNQ6UWP8 590 aa12.39□□□□□ -0.43
EXOSC3-207ENST00000490516 PACS2Q86VP3 889 aa12.39□□□□□ -0.43
EXOSC3-207ENST00000490516 SLC35B2Q8TB61 432 aa12.39□□□□□ -0.43
EXOSC3-207ENST00000490516 SLC5A11Q8WWX8 675 aa12.39□□□□□ -0.43
EXOSC3-207ENST00000490516 ALG3Q92685 438 aa12.39□□□□□ -0.43
EXOSC3-207ENST00000490516 C1orf159Q96HA4 380 aa12.39□□□□□ -0.43
EXOSC3-207ENST00000490516 KRT12Q99456 494 aa12.39□□□□□ -0.43
EXOSC3-207ENST00000490516 L2HGDHQ9H9P8 463 aa12.39□□□□□ -0.43
EXOSC3-207ENST00000490516 PARVBQ9HBI1 364 aa12.39□□□□□ -0.43
EXOSC3-207ENST00000490516 RAB6BQ9NRW1 208 aa12.39□□□□□ -0.43
EXOSC3-207ENST00000490516 TEX10Q9NXF1 929 aaPredicted RBP12.39□□□□□ -0.43
EXOSC3-207ENST00000490516 KLHL42Q9P2K6 505 aa12.39□□□□□ -0.43
EXOSC3-207ENST00000490516 MAGED1Q9Y5V3 778 aaPredicted RBP12.39□□□□□ -0.43
EXOSC3-207ENST00000490516 FAM234BA2RU67 622 aa12.38□□□□□ -0.43
EXOSC3-207ENST00000490516 EIF3FO00303 357 aaPredicted RBP12.38□□□□□ -0.43
EXOSC3-207ENST00000490516 UBFD1O14562 309 aaKnown RBP12.38□□□□□ -0.43
EXOSC3-207ENST00000490516 SNX4O95219 450 aa12.38□□□□□ -0.43
EXOSC3-207ENST00000490516 DANCRP0C864 163 aa12.38□□□□□ -0.43
EXOSC3-207ENST00000490516 ETS1P14921 441 aa12.38□□□□□ -0.43
EXOSC3-207ENST00000490516 PAMP19021 973 aa12.38□□□□□ -0.43
EXOSC3-207ENST00000490516 CHMP24386 653 aa12.38□□□□□ -0.43
EXOSC3-207ENST00000490516 IGFBP5P24593 272 aa12.38□□□□□ -0.43
EXOSC3-207ENST00000490516 CERS1P27544 350 aa12.38□□□□□ -0.43
EXOSC3-207ENST00000490516 STXBP1P61764 594 aaKnown RBP12.38□□□□□ -0.43
EXOSC3-207ENST00000490516 SIRPAP78324 504 aa12.38□□□□□ -0.43
EXOSC3-207ENST00000490516 DHX9Q08211 1270 aaKnown RBP12.38□□□□□ -0.43
EXOSC3-207ENST00000490516 FAM174BQ3ZCQ3 159 aa12.38□□□□□ -0.43
EXOSC3-207ENST00000490516 DUPD1Q68J44 220 aa12.38□□□□□ -0.43
EXOSC3-207ENST00000490516 DGAT2L6Q6ZPD8 337 aa12.38□□□□□ -0.43
EXOSC3-207ENST00000490516 MILR1Q7Z6M3 343 aa12.38□□□□□ -0.43
EXOSC3-207ENST00000490516 CILP2Q8IUL8 1156 aa12.38□□□□□ -0.43
EXOSC3-207ENST00000490516 KLHDC8AQ8IYD2 350 aa12.38□□□□□ -0.43
EXOSC3-207ENST00000490516 OR56A3Q8NH54 315 aa12.38□□□□□ -0.43
EXOSC3-207ENST00000490516 LILRB1Q8NHL6 650 aaPredicted RBP12.38□□□□□ -0.43
EXOSC3-207ENST00000490516 EEF1AKMT1Q8WVE0 214 aa12.38□□□□□ -0.43
EXOSC3-207ENST00000490516 KCNJ9Q92806 393 aa12.38□□□□□ -0.43
EXOSC3-207ENST00000490516 CAVIN3Q969G5 261 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms